mRNA_H-paniculata_contig13511.2175.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13511.2175.1
Unique NamemRNA_H-paniculata_contig13511.2175.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig13511.2175.1 vs. uniprot
Match: D7G9D8_ECTSI (MutL protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D8_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 3.500e-40
Identity = 110/201 (54.73%), Postives = 131/201 (65.17%), Query Frame = 1
Query: 2212 VDGEGGL--VRRAMNNLRHTADVALAYDLDVLGGDGLGSHGVAATAAAELDDEEELSAVVGGAILESFLPTEACDSCQVSDAGGAAVNSPHGPGGARARRFRFGGRAERSIHSFSDSR-----SKKEKPISEVAHADQNEFAAGAGAVPVTVTPSELGRARVVGQAGRKFILLRAETGAILCVDQHAADERIKLEELQLQV 2793
            V+G GG    R +  +    A  ALAYD DVLGGDGLG  G         ++EEE   V G  +L  FL T   DSC VSDAGGAAV SP GPGG RAR+   GG AE++     DSR      ++E+ I +V  A Q+E  AGAGAV VTVTP EL  A ++GQAGRKFILLRA+TGA+LC+DQHAADER+KLEEL+ QV
Sbjct: 1258 VEGGGGRGGARSSKEDRMRAAGAALAYDQDVLGGDGLGGDG---------EEEEEPDTVDG--VLGKFLATGDYDSCHVSDAGGAAVYSPQGPGGDRARKA--GGEAEKAAPE-KDSRYNPLPGRRERQIPQVLQAGQDEVGAGAGAVAVTVTPEELSEALLIGQAGRKFILLRAKTGAVLCLDQHAADERVKLEELERQV 1444          
BLAST of mRNA_H-paniculata_contig13511.2175.1 vs. uniprot
Match: A0A6H5JWV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWV7_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 9.310e-18
Identity = 69/144 (47.92%), Postives = 82/144 (56.94%), Query Frame = 1
Query: 2266 ADVALAYDLDVLGGDGLGSHGVAATAAAELDDEEELSAVVGGAILESFLPTEACDSCQVSDAGGAAVNSPHGPGGARARRFRFGGRAERSIHSFSDSRS----KKEKPISEVAHADQNEFAAGAGAVPVTVTPSELGRARVVGQ 2685
            A  ALAYD DVLGGDGLG               E+   V G  +L  FL T   DSC VSDAGG AV SP GPGG RAR+   GG AE++        +    ++E+ I +V  A Q+E  AGAGAV VTVTP ELG A ++GQ
Sbjct: 1198 AGAALAYDQDVLGGDGLGXX---------XXXXEKPDTVDG--VLGKFLATGGYDSCHVSDAGGRAVYSPQGPGGGRARKA--GGEAEKAAAETDSQHNPLPGRRERQIPQVLQAGQDEVGAGAGAVAVTVTPEELGEALLIGQ 1328          
BLAST of mRNA_H-paniculata_contig13511.2175.1 vs. uniprot
Match: H3HC10_PHYRM (MutL_C domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HC10_PHYRM)

HSP 1 Score: 56.2 bits (134), Expect = 5.940e-5
Identity = 26/56 (46.43%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 2635 PVTVTPSELGRARVVGQAGRKFILLRAETGA---ILCVDQHAADERIKLEELQLQV 2793
            P+ ++ + L   +V+ Q  RKFIL+RA+T     +LC+DQHAADER++LE+L+L +
Sbjct:   42 PIKISKATLANLQVIRQVDRKFILVRADTPRGKLLLCIDQHAADERVRLEKLELDM 97          
BLAST of mRNA_H-paniculata_contig13511.2175.1 vs. uniprot
Match: A0A1X2HC61_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HC61_SYNRA)

HSP 1 Score: 58.2 bits (139), Expect = 7.170e-5
Identity = 59/164 (35.98%), Postives = 81/164 (49.39%), Query Frame = 1
Query: 2347 AELDDEE---ELSAVVGGAILESFLPTEACDSCQ-------VSDAGGAAVNSPHGPGGARARRFRFGGRAERSI--HSFSDSRSKKEKPISE---VAHADQNEFAAGAGAV----PVTVTPSELGRARVVGQAGRKFILLRAETGAILCVDQHAADERIKLEEL 2781
            A LDD E    L+A V  A+  SFL  ++C S           D+   + + P  P   R+     G  A R    H+   ++ ++  P+S    V       FAAG  A     P  +T S+L RA VV Q  RKFILLR +T  +L VDQHAADER++LE++
Sbjct:  323 ATLDDSEFGIRLAARVRRAVA-SFLRLQSCISTAHYRQFTTQEDSERFSSSQPTPPAHVRSPIRAAGSSAARMFLEHATPAAKRRRPTPVSNDDGVPSKQLTPFAAGGTAGDLPWPHQLTKSDLARAEVVSQVDRKFILLRLDT-LLLLVDQHAADERVRLEQM 484          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13511.2175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G9D8_ECTSI3.500e-4054.73MutL protein homolog 3 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JWV7_9PHAE9.310e-1847.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
H3HC10_PHYRM5.940e-546.43MutL_C domain-containing protein n=1 Tax=Phytophth... [more]
A0A1X2HC61_SYNRA7.170e-535.98Uncharacterized protein n=1 Tax=Syncephalastrum ra... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13511contigH-paniculata_contig13511:2526..7114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score176.4
Seed ortholog evalue5e-41
Seed eggNOG ortholog2880.D7G9D8
Preferred nameMLH3
KEGG koko:K08739
KEGG Pathwayko03430,map03430
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000280,GO:0000793,GO:0000794,GO:0000795,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003696,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005712,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022414,GO:0031974,GO:0031981,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0035825,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0048285,GO:0050896,GO:0051321,GO:0051716,GO:0061982,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0099086,GO:0140013,GO:1901360,GO:1901363,GO:1903046,GO:1990391,GO:1990837
EggNOG free text desc.mismatched DNA binding
EggNOG OGsCOG0323@1,KOG1977@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03400
Exons5
Model size2796
Cds size2250
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13511.2175.1prot_H-paniculata_contig13511.2175.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13511 3072..7114 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929069.3321893-UTR-H-paniculata_contig13511:2525..30711622929069.3321893-UTR-H-paniculata_contig13511:2525..3071Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13511 2526..3071 +
1691480719.8426416-UTR-H-paniculata_contig13511:2525..30711691480719.8426416-UTR-H-paniculata_contig13511:2525..3071Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13511 2526..3071 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929069.3457055-CDS-H-paniculata_contig13511:3071..31921622929069.3457055-CDS-H-paniculata_contig13511:3071..3192Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13511 3072..3192 +
1691480719.8529463-CDS-H-paniculata_contig13511:3071..31921691480719.8529463-CDS-H-paniculata_contig13511:3071..3192Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13511 3072..3192 +
1622929069.3572774-CDS-H-paniculata_contig13511:3278..40461622929069.3572774-CDS-H-paniculata_contig13511:3278..4046Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13511 3279..4046 +
1691480719.860977-CDS-H-paniculata_contig13511:3278..40461691480719.860977-CDS-H-paniculata_contig13511:3278..4046Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13511 3279..4046 +
1622929069.3722234-CDS-H-paniculata_contig13511:4061..50581622929069.3722234-CDS-H-paniculata_contig13511:4061..5058Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13511 4062..5058 +
1691480719.8744214-CDS-H-paniculata_contig13511:4061..50581691480719.8744214-CDS-H-paniculata_contig13511:4061..5058Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13511 4062..5058 +
1622929069.384385-CDS-H-paniculata_contig13511:5849..61021622929069.384385-CDS-H-paniculata_contig13511:5849..6102Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13511 5850..6102 +
1691480719.8866553-CDS-H-paniculata_contig13511:5849..61021691480719.8866553-CDS-H-paniculata_contig13511:5849..6102Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13511 5850..6102 +
1622929069.39627-CDS-H-paniculata_contig13511:7003..71141622929069.39627-CDS-H-paniculata_contig13511:7003..7114Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13511 7004..7114 +
1691480719.8952498-CDS-H-paniculata_contig13511:7003..71141691480719.8952498-CDS-H-paniculata_contig13511:7003..7114Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13511 7004..7114 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13511.2175.1

>prot_H-paniculata_contig13511.2175.1 ID=prot_H-paniculata_contig13511.2175.1|Name=mRNA_H-paniculata_contig13511.2175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=750bp
MEATKAAAGGITPMVAAVMTGEAVEIAQPRKRALLESGRGEGPGLWFDEK
SAPSRRPVAGATVRRPPSPKFDFFAAETEASAPTLSSISSRIHDGDGRRE
MHSPPALRQKQEENRGGDEALVATDEVQGKSRSPAHEPRGSSSNSSSPIA
SERLLLGRKRDGFSRFAPPLSGADIVSEMSGESRQVDDGHPPVLATVTQA
TASHESYRTGKANDASRLASTSPRALFARKRARPTSDACIDDAPASAGSS
SSYSPPSCPPPNRRQRRHSPLVLERSTRASTNEDEKATARLPSRGGHGIQ
ASTPRTEEQEEAKEEEEEEDQEDQERVILGNGWLGKRANSPRRCRQGRWN
GQGLTGSGRGSPRDLAGGAVNEASSSGGGNDDHVRGTTSAIDEGVEPSAE
ASVASEETSGEPRVHGGWERHRNSEREGDSERVTGSEDDGQSEGGNRLPS
GDKQLAPAMQVDVGESHTSSPEEVQGAHRMQSFKSKEQGGTHSEDVRRQL
QQRETGALPEAENTATVDVPSFETSFDATAQAPGRSSSTGGRSSDESAKS
DRGRGVDGEGGLVRRAMNNLRHTADVALAYDLDVLGGDGLGSHGVAATAA
AELDDEEELSAVVGGAILESFLPTEACDSCQVSDAGGAAVNSPHGPGGAR
ARRFRFGGRAERSIHSFSDSRSKKEKPISEVAHADQNEFAAGAGAVPVTV
TPSELGRARVVGQAGRKFILLRAETGAILCVDQHAADERIKLEELQLQVL
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mRNA from alignment at H-paniculata_contig13511:2526..7114+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13511.2175.1 ID=mRNA_H-paniculata_contig13511.2175.1|Name=mRNA_H-paniculata_contig13511.2175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4589bp|location=Sequence derived from alignment at H-paniculata_contig13511:2526..7114+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGCTGGCGGGGGAGAAGAAGCGAACAGTCCTGTGTGCGATGAAAAC TTGGGCGGAAATCCGTTAGACAAGTATGAGGAGACGCCCCAGCTTGATTA CTTGGGCGGTGGCAAGCGAGTGGGCTTCGTTGCGGAGGCGCCGGTTCTCG GTTGTGAGGAATGGTCGCCGCCGCCACCGCTGCCGGGCGGGGGTTTTGGG CATGGGTCTATACTTGCTCGGCCGCATGTTATCCGCCCGAACGGATGTAG AGACCGCCATGCCCGCGGAAGGGGTAGGCGGGGAGAGCGCGAACGCAAGC CGCTTTCTACGATCGCGCGTGGAAGCTCCCCGGCAAGAGGGGAGTGGCTG CGGCGCGTTCCTGGGTTGGAAACTGATGGAGAAGCCGTGCATGAAATTCG AAACCCGCTGTCGACAAGTGCTGCTGCTGTTGCTGCCCCCGCCCCCCCCG CCGCTGTGAAAGGTGTAAATGAGAGAAGCTTATCCCGCCTATTCGAGTAC GCCTTCGCCGATCCAGATCAATCACGTGGCTCCCAGGGATTGATGAATGG AGGCAACAAAAGCCGCAGCAGGAGGGATCACACCTATGGTAGCGGCGGTG ATGACGGGCGAAGCAGTGGAAATCGCGCAGCCGAGAAAAAGGGCCCTGCT CGAAAGTGGGCGGGGAGGCGAAGGGTGAGTAATACTGATGGTGATTTCAA TCGAAGGGTTTCTCGGTCGCGACCGCCGTACGTACCCTTGCTACTCACGG AAGAAGGGCCAGGTCTGTGGTTCGACGAAAAGAGCGCCCCGTCGCGCCGG CCTGTAGCGGGCGCAACGGTGCGGCGCCCCCCTAGCCCGAAGTTCGACTT TTTCGCCGCAGAGACGGAAGCTAGCGCGCCTACTCTCAGTAGCATCTCAT CCAGAATTCACGACGGGGACGGCCGTAGAGAGATGCATTCACCACCGGCA TTGCGTCAGAAGCAAGAAGAAAATAGAGGTGGAGATGAAGCTTTGGTCGC AACGGATGAGGTACAGGGGAAAAGTAGGAGCCCGGCACACGAACCCCGCG GCAGCAGCAGCAACAGCAGCAGCCCCATCGCGAGCGAACGGTTGCTGCTA GGAAGGAAGCGTGATGGTTTCAGCCGCTTTGCCCCGCCGCTGTCCGGCGC AGACATCGTCTCGGAAATGTCCGGAGAGAGCCGACAGGTGGATGATGGCC ACCCGCCAGTGTTGGCGACGGTGACTCAAGCGACAGCGTCGCATGAGTCG TACCGTACAGGCAAAGCAAATGACGCCTCGCGCCTCGCCTCTACTTCGCC GCGCGCGTTGTTTGCGCGCAAACGCGCTCGCCCGACGAGTGACGCATGTA TCGATGACGCCCCTGCATCAGCTGGAAGCTCTTCGTCGTATTCGCCGCCT TCGTGTCCTCCGCCCAACCGTAGACAACGGCGACATAGTCCTTTAGTTCT GGAAAGGTCGACCCGCGCTAGCACCAACGAGGATGAGAAGGCTACAGCAA GACTGCCGTCTCGTGGTGGGCGCGGGATGCCCGAAGACGGCATTCAGGCG AGTACGCCAAGGACCGAGGAGCAAGAGGAGGCAAAGGAGGAAGAGGAGGA GGAGGACCAGGAGGACCAAGAAAGGGTCATTTTGGGAAATGGCTGGCTAG GCAAGCGGGCGAATAGCCCGCGTCGATGCCGGCAAGGACGGTGGAACGGT CAAGGTCTGACCGGGAGCGGGCGCGGGAGCCCGCGAGATCTCGCTGGAGG AGCCGTGAATGAAGCAAGCAGCAGCGGCGGCGGGAACGACGATCATGTGA GAGGGACTACATCCGCCATAGATGAAGGGGTTGAGCCGTCGGCGGAAGCA AGTGTTGCTTCCGAGGAAACAAGCGGGGAACCACGGGTGCATGGAGGATG GGAGAGACACAGGAACTCCGAGAGAGAGGGAGATTCTGAGCGAGTGACAG GGTCTGAGGATGACGGACAAAGTGAGGGTGGAAATCGATTGCCATCAGGG GATAAACAGCTTGCTCCTGCTATGCAAGTGGATGTCGGCGAGTCCCACAC TTCAAGCCCGGAGGAGGTGCAGGGGGCGCATCGTATGCAGAGCTTCAAGA GTAAGGAGCAGGGTGGGACGCACAGCGAAGACGTCCGTCGACAGTTACAA CAACGCGAGACTGGGGCGCTTCCGGAAGCAGAGAACACGGCGACTGTTGA CGTGCCGTCATTCGAAACCTCTTTCGACGCTACCGCTCAGGCCCCGGGTC GCAGTAGCTCTACTGGCGGACGCAGCAGCGATGAAAGTGCAAAATCCGAC AGGGGTAGGGGTGTAGATGGGGAGGGAGGTCTTGTTCGCAGGGCGATGAA CAACCTAAGGCACACGGCCGATGTTGCTCTCGCTTACGATCTGGACGTGC TTGGCGGAGATGGCCTTGGGTCGCACGGTGTTGCCGCTACTGCCGCCGCG GAGCTTGATGATGAGGAGGAGCTGTCGGCCGTTGTTGGGGGCGCGATACT GGAGAGCTTCTTGCCAACAGAGGCATGCGACAGGTGTGCTATGTGATGTG TTTCTGCTTTGTTCGTCGCGCATTAGGTCTCCTCTTGGAACCGCCAGTCC AAAGTTGAAAGTGTAATGCCATGGTCCTTACCTGGTATTATCTTGCGTTT GGAGCAGCAGTCCCACTCGCTCGCCAACGTTGAAGTTGGCGGCGGTATAC TCGCAGACTATTTTTTTCCCTTCTCCAGCCGTTTTCTTTTTGCCGCGAAT TAATATTCTTCCCTAAAACGCTTTGAGAAGGAAAATTGTGCATACAAGAC AACAACCTATCAATCCGATGGATTATGCACACCACCCTTTCGACCACGGG GGGTACGGTCGTGATTGGATTGAGTGGGATAGGATGGATGATGACATAAA AAAGTTCTAGTTCTAGTGATCGCTGGCGCCGTTTGTTGCACACGGCATTT GGGCATTGTTTTTGTCGTTTATCTGATAGCTAGGTGAACATGACGGCGAC AAAAGATGTTGGTTTTGATTATCGCTGGTGTGGGTTTACACAAGGCAGTT CCCGTTGATGTTACAATGTAGCCTTTCGTCAGCCGGCGCGAAGGTCCAAG CGCTTGGTAATTGCTCGGAGGGGTCATGTACACAACATTTTCGGCATGAA TAAGTCTATGCTCTAGGCAGCACTCGGATCGAGTTCTTTTCGTGGTACAC GAAAAAACCCCTCACTATCCCCCACCTTCACCCCCCTCCCCGCTCCCCCC ATTACCCCTCACTACCCCACCCTAACCCCCACCCATGATCTCTCTCCCCA CCCATATCACTTTGGAATGTTCAGCTGCCAGGTCTCCGATGCCGGCGGAG CCGCTGTCAACTCTCCGCATGGTCCCGGAGGAGCTCGAGCTCGAAGGTTC AGATTCGGTGGCAGAGCCGAACGCTCAATCCACAGCTTTTCCGATTCGCG ATCGAAGAAAGAAAAGCCGATATCGGAGGTGGCGCACGCGGACCAGAATG AGTTCGCTGCTGGCGCGGGTGCGGTACCGGTGACCGTGACGCCTAGCGAG CTTGGTCGGGCTCGCGTTGTGGGGCAGGTGAGGGTATTCAAAAGAACAAG TGCTCACGCCCCTCGGCCCTTTGCGATGAGAGATATGGCGGGGTCTTGGG CTGAAAGGTAGATTTTCATCCAAGACGAAAGCGGTTCTAACCTTCTATAA TCGGCTGTTATTTACAAGTAAGCTTGTAGGTCTTGCTGCATGAGTTGGTT CGTCAAACGACCTTCAGTAAGTTCCGCTGTATTGTTATCTCTGTGTACTA CTCCTGTATATGAGACATGGCATTCTTCAAGTTGACGGCACCAACCATTT GTTCAGCTACTACAATTATACGTATATGCAATAAGTATCATCGTTGCAAG CTGGTGAACTTGAGGGTTCGGCTTGCTCCTTTTTTTAGGGTAGGTAGGGG TTATAGGTTATGTTAGGAGGCTTGTTTACTTGAAAAAATATGAGACACCA TTCCTGTAATGTTTGATATATATATATATATATGTTTGCAAAGCTAACTC TGGTTGGTCCACCTGCGATGGCATGTCAATCAGTCTATTGGCTTATAAGT TTCCTCCGTCCGGGTGTATGCATGTATCGTGTAAGTTAACGCTTGATCTT TAAGTTCATCCTTTTACCTCGATCCCTTGTTTCGGTTGGGATCTTCCTTC ATCTTTTAGTCCCGCAGGAGTAGTCGCATGTCTTGATCAAAAGACGAAAA CATAGTTCATGGTCAATTTTTTTCAGTGAATAACACAAACACCATCCAGT TAGCGTATACACCTCTATCTCCTTCCAGGAATCGTGGTCTTTTCTAGCAA CCAGGGTACCTCACGCATAATACCGGTATGCCCCCCTACACCCACCTTCA CGGTCAAGGTGTAAACTGCCAACGCCCCTGCCGCATGTCCTATTGCCGCT TTGCAAACCTCGTGGCTGCTTCTTTTAGGCCGGCCGCAAGTTTATCCTGC TGCGCGCAGAGACAGGCGCGATTCTGTGCGTCGATCAGCATGCGGCAGAT GAGAGGATTAAGCTGGAGGAGCTGCAACTCCAGGTATTA
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Coding sequence (CDS) from alignment at H-paniculata_contig13511:2526..7114+

>mRNA_H-paniculata_contig13511.2175.1 ID=mRNA_H-paniculata_contig13511.2175.1|Name=mRNA_H-paniculata_contig13511.2175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4500bp|location=Sequence derived from alignment at H-paniculata_contig13511:2526..7114+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGCAACAAAAGCCGCAGCAGGAGGGATCACACCTATGGTAGCGGC
GGTGATGACGGGCGAAGCAGTGGAAATCGCGCAGCCGAGAAAAAGGGCCC
TGCTCGAAAGTGGGCGGGGAGATGGAGGCAACAAAAGCCGCAGCAGGAGG
GATCACACCTATGGTAGCGGCGGTGATGACGGGCGAAGCAGTGGAAATCG
CGCAGCCGAGAAAAAGGGCCCTGCTCGAAAGTGGGCGGGGAGAAGGGCCA
GGTCTGTGGTTCGACGAAAAGAGCGCCCCGTCGCGCCGGCCTGTAGCGGG
CGCAACGGTGCGGCGCCCCCCTAGCCCGAAGTTCGACTTTTTCGCCGCAG
AGACGGAAGCTAGCGCGCCTACTCTCAGTAGCATCTCATCCAGAATTCAC
GACGGGGACGGCCGTAGAGAGATGCATTCACCACCGGCATTGCGTCAGAA
GCAAGAAGAAAATAGAGGTGGAGATGAAGCTTTGGTCGCAACGGATGAGG
TACAGGGGAAAAGTAGGAGCCCGGCACACGAACCCCGCGGCAGCAGCAGC
AACAGCAGCAGCCCCATCGCGAGCGAACGGTTGCTGCTAGGAAGGAAGCG
TGATGGTTTCAGCCGCTTTGCCCCGCCGCTGTCCGGCGCAGACATCGTCT
CGGAAATGTCCGGAGAGAGCCGACAGGTGGATGATGGCCACCCGCCAGTG
TTGGCGACGGTGACTCAAGCGACAGCGTCGCATGAGTCGTACCGTACAGG
CAAAGCAAATGACGCCTCGCGCCTCGCCTCTACTTCGCCGCGCGCGTTGT
TTGCGCGCAAACGCGCTCGCCCGACGAGTGACGCATGTATCGATGACGCC
CCTGCATCAGCTGGAAGCTCTTCGTCGTATTCGCCGCCTTCGTGTCCTCC
GCCCAACCGTAGACAACGGCGACATAGTCCTTTAGTTCTGGAAAGGTCGA
CCCGCGCTAGCACCAACGAGGATGAGAAGGCTACAGCAAGACTGCCGTCT
CGTGGTGGGCAAGGGCCAGGTCTGTGGTTCGACGAAAAGAGCGCCCCGTC
GCGCCGGCCTGTAGCGGGCGCAACGGTGCGGCGCCCCCCTAGCCCGAAGT
TCGACTTTTTCGCCGCAGAGACGGAAGCTAGCGCGCCTACTCTCAGTAGC
ATCTCATCCAGAATTCACGACGGGGACGGCCGTAGAGAGATGCATTCACC
ACCGGCATTGCGTCAGAAGCAAGAAGAAAATAGAGGTGGAGATGAAGCTT
TGGTCGCAACGGATGAGGTACAGGGGAAAAGTAGGAGCCCGGCACACGAA
CCCCGCGGCAGCAGCAGCAACAGCAGCAGCCCCATCGCGAGCGAACGGTT
GCTGCTAGGAAGGAAGCGTGATGGTTTCAGCCGCTTTGCCCCGCCGCTGT
CCGGCGCAGACATCGTCTCGGAAATGTCCGGAGAGAGCCGACAGGTGGAT
GATGGCCACCCGCCAGTGTTGGCGACGGTGACTCAAGCGACAGCGTCGCA
TGAGTCGTACCGTACAGGCAAAGCAAATGACGCCTCGCGCCTCGCCTCTA
CTTCGCCGCGCGCGTTGTTTGCGCGCAAACGCGCTCGCCCGACGAGTGAC
GCATGTATCGATGACGCCCCTGCATCAGCTGGAAGCTCTTCGTCGTATTC
GCCGCCTTCGTGTCCTCCGCCCAACCGTAGACAACGGCGACATAGTCCTT
TAGTTCTGGAAAGGTCGACCCGCGCTAGCACCAACGAGGATGAGAAGGCT
ACAGCAAGACTGCCGTCTCGTGGTGGGCACGGCATTCAGGCGAGTACGCC
AAGGACCGAGGAGCAAGAGGAGGCAAAGGAGGAAGAGGAGGAGGAGGACC
AGGAGGACCAAGAAAGGGTCATTTTGGGAAATGGCTGGCTAGGCAAGCGG
GCGAATAGCCCGCGTCGATGCCGGCAAGGACGGTGGAACGGTCAAGGTCT
GACCGGGAGCGGGCGCGGGAGCCCGCGAGATCTCGCTGGAGGAGCCGTGA
ATGAAGCAAGCAGCAGCGGCGGCGGGAACGACGATCATGTGAGAGGGACT
ACATCCGCCATAGATGAAGGGGTTGAGCCGTCGGCGGAAGCAAGTGTTGC
TTCCGAGGAAACAAGCGGGGAACCACGGGTGCATGGAGGATGGGAGAGAC
ACAGGAACTCCGAGAGAGAGGGAGATTCTGAGCGAGTGACAGGGTCTGAG
GATGACGGACAAAGTGAGGGTGGAAATCGATTGCCATCAGGGGATAAACA
GCTTGCTCCTGCTATGCAAGTGGATGTCGGCGAGTCCCACACTTCAAGCC
CGGAGGAGGTGCAGGGGGCGCATCGTATGCAGAGCTTCAAGAGTAAGGAG
CAGGGTGGGACGCACAGCGAAGACGTCCGTCGACAGTTACAACAACGCGA
GACTGGGGCGCTTCCGGAAGCAGAGAACACGGCGACTGTTGACGTGCCGT
CATTCGAAACCTCTTTCGACGCTACCGCTCAGGCCCCGGGTCGCAGTAGC
TCTACTGGCGGACGCAGCAGCGATGAAAGTGCAAAATCCGACAGGGGTAG
GGGTGTAGATGGGGAGGGAGGTCTTGTTCGCAGGGCGATGAACAACCTAA
GGCACACGGCCGATGTTGCTCTCGCTTACGATCTGGACGTGCTTGGCGGA
GATGGCCTTGGGTCGCACGGTGTTGCCGCTACTGCCGCCGCGGAGCTTGA
TGATGAGGAGGAGCTGTCGGCCGTTGTTGGGGGCGCGATACTGGAGAGCT
TCTTGCCAACAGAGGCATGCGACAGACGGCATTCAGGCGAGTACGCCAAG
GACCGAGGAGCAAGAGGAGGCAAAGGAGGAAGAGGAGGAGGAGGACCAGG
AGGACCAAGAAAGGGTCATTTTGGGAAATGGCTGGCTAGGCAAGCGGGCG
AATAGCCCGCGTCGATGCCGGCAAGGACGGTGGAACGGTCAAGGTCTGAC
CGGGAGCGGGCGCGGGAGCCCGCGAGATCTCGCTGGAGGAGCCGTGAATG
AAGCAAGCAGCAGCGGCGGCGGGAACGACGATCATGTGAGAGGGACTACA
TCCGCCATAGATGAAGGGGTTGAGCCGTCGGCGGAAGCAAGTGTTGCTTC
CGAGGAAACAAGCGGGGAACCACGGGTGCATGGAGGATGGGAGAGACACA
GGAACTCCGAGAGAGAGGGAGATTCTGAGCGAGTGACAGGGTCTGAGGAT
GACGGACAAAGTGAGGGTGGAAATCGATTGCCATCAGGGGATAAACAGCT
TGCTCCTGCTATGCAAGTGGATGTCGGCGAGTCCCACACTTCAAGCCCGG
AGGAGGTGCAGGGGGCGCATCGTATGCAGAGCTTCAAGAGTAAGGAGCAG
GGTGGGACGCACAGCGAAGACGTCCGTCGACAGTTACAACAACGCGAGAC
TGGGGCGCTTCCGGAAGCAGAGAACACGGCGACTGTTGACGTGCCGTCAT
TCGAAACCTCTTTCGACGCTACCGCTCAGGCCCCGGGTCGCAGTAGCTCT
ACTGGCGGACGCAGCAGCGATGAAAGTGCAAAATCCGACAGGGGTAGGGG
TGTAGATGGGGAGGGAGGTCTTGTTCGCAGGGCGATGAACAACCTAAGGC
ACACGGCCGATGTTGCTCTCGCTTACGATCTGGACGTGCTTGGCGGAGAT
GGCCTTGGGTCGCACGGTGTTGCCGCTACTGCCGCCGCGGAGCTTGATGA
TGAGGAGGAGCTGTCGGCCGTTGTTGGGGGCGCGATACTGGAGAGCTTCT
TGCCAACAGAGGCATGCGACAGCTGCCAGGTCTCCGATGCCGGCGGAGCC
GCTGTCAACTCTCCGCATGGTCCCGGAGGAGCTCGAGCTCGAAGGTTCAG
ATTCGGTGGCAGAGCCGAACGCTCAATCCACAGCTTTTCCGATTCGCGAT
CGAAGAAAGAAAAGCCGATATCGGAGGTGGCGCACGCGGACCAGAATGAG
TTCGCTGCTGGCGCGGGTGCGGTACCGGTGACCGTGACGCCTAGCGAGCT
TGGTCGGGCTCGCGTTGTGGGGCAGCTGCCAGGTCTCCGATGCCGGCGGA
GCCGCTGTCAACTCTCCGCATGGTCCCGGAGGAGCTCGAGCTCGAAGGTT
CAGATTCGGTGGCAGAGCCGAACGCTCAATCCACAGCTTTTCCGATTCGC
GATCGAAGAAAGAAAAGCCGATATCGGAGGTGGCGCACGCGGACCAGAAT
GAGTTCGCTGCTGGCGCGGGTGCGGTACCGGTGACCGTGACGCCTAGCGA
GCTTGGTCGGGCTCGCGTTGTGGGGCAGGCCGGCCGCAAGTTTATCCTGC
TGCGCGCAGAGACAGGCGCGATTCTGTGCGTCGATCAGCATGCGGCAGAT
GAGAGGATTAAGCTGGAGGAGCTGCAACTCCAGGTATTAGCCGGCCGCAA
GTTTATCCTGCTGCGCGCAGAGACAGGCGCGATTCTGTGCGTCGATCAGC
ATGCGGCAGATGAGAGGATTAAGCTGGAGGAGCTGCAACTCCAGGTATTA
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