mRNA_H-paniculata_contig13481.2166.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13481.2166.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 150 bits (380), Expect = 2.260e-41 Identity = 68/137 (49.64%), Postives = 96/137 (70.07%), Query Frame = 1 Query: 1 GAMGSTDITHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSSRVLSVTKGYEGSQNEKTIVRLDKAIS*IRKDEPYVSTEFTLIYADGTVTTHKGVFSIVDGGYHKWRILVCPMKNPGSAETILWMQRLESVRKDV 411 GA+GSTD+TH++WG P + +R+YTGKE PT+A+++ VDHS RVL+VT+G+ G+ N+KTI+R DKA++ IR D Y ++ L DG KG + +VD GYHKWR L+ P K P +++ +RLES RKDV Sbjct: 153 GAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDV 289
BLAST of mRNA_H-paniculata_contig13481.2166.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 147 bits (371), Expect = 3.880e-41 Identity = 69/137 (50.36%), Postives = 92/137 (67.15%), Query Frame = 1 Query: 1 GAMGSTDITHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSSRVLSVTKGYEGSQNEKTIVRLDKAIS*IRKDEPYVSTEFTLIYADGTVTTHKGVFSIVDGGYHKWRILVCPMKNPGSAETILWMQRLESVRKDV 411 GAMGS D+TH+ W P + +R YTGKE PT+ Y++ VDH+ R ++VT+G+ GS N+KT V D A+ IR D+ Y F + DGT TT KG + +VD GYHKW+IL+ P K P S +L+ +RLESVRKDV Sbjct: 30 GAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDV 166
BLAST of mRNA_H-paniculata_contig13481.2166.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 150 bits (380), Expect = 1.060e-40 Identity = 68/137 (49.64%), Postives = 96/137 (70.07%), Query Frame = 1 Query: 1 GAMGSTDITHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSSRVLSVTKGYEGSQNEKTIVRLDKAIS*IRKDEPYVSTEFTLIYADGTVTTHKGVFSIVDGGYHKWRILVCPMKNPGSAETILWMQRLESVRKDV 411 GA+GSTD+TH++WG P + +R+YTGKE PT+A+++ VDHS RVL+VT+G+ G+ N+KTI+R DKA++ IR D Y ++ L DG KG + +VD GYHKWR L+ P K P +++ +RLES RKDV Sbjct: 244 GAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDV 380
BLAST of mRNA_H-paniculata_contig13481.2166.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 149 bits (376), Expect = 3.230e-40 Identity = 71/137 (51.82%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 1 GAMGSTDITHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSSRVLSVTKGYEGSQNEKTIVRLDKAIS*IRKDEPYVSTEFTLIYADGTVTTHKGVFSIVDGGYHKWRILVCPMKNPGSAETILWMQRLESVRKDV 411 GA GSTD+TH+ WG P + +R YTGKE PT+AY++ VDH+ RVL+VT G+ GS N+K+I+R D A++ IR+D Y EFT+ ADGT KG + +VD GYHKW L+ P K P + + +RLESVRKDV Sbjct: 228 GATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDV 364
BLAST of mRNA_H-paniculata_contig13481.2166.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 140 bits (354), Expect = 1.140e-37 Identity = 67/137 (48.91%), Postives = 90/137 (65.69%), Query Frame = 1 Query: 1 GAMGSTDITHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSSRVLSVTKGYEGSQNEKTIVRLDKAIS*IRKDEPYVSTEFTLIYADGTVTTHKGVFSIVDGGYHKWRILVCPMKNPGSAETILWMQRLESVRKDV 411 GAMGS D+TH+ W P + +R YTGKE +PT+ Y++ V+H+ R ++VT+G+ S N+KT V D + IR D Y F + DGT TT KG + +VD GYHKW+IL+ P K P S IL+ +RLESVRKDV Sbjct: 170 GAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDV 306
BLAST of mRNA_H-paniculata_contig13481.2166.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 130 bits (328), Expect = 1.570e-33 Identity = 69/165 (41.82%), Postives = 93/165 (56.36%), Query Frame = 1 Query: 1 GAMGSTDITHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSSRVLSVTKGYEGSQNEKTIVRLDKAIS*IRKDEPYV----------------------------STEFTLIYADGTVTTHKGVFSIVDGGYHKWRILVCPMKNPGSAETILWMQRLESVRKDV 411 GA+GS D+TH+ W P + +R YTGKE PT+AY++ VDH+ R ++VT+G+ GS N+KTIV D A+ I D+ Y F + DGT TT KG + +VD GYHKW+IL+ P K P S +L+ +RLESVRKDV Sbjct: 157 GAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDV 321
BLAST of mRNA_H-paniculata_contig13481.2166.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 124 bits (312), Expect = 7.850e-33 Identity = 61/121 (50.41%), Postives = 82/121 (67.77%), Query Frame = 1 Query: 49 PVSHSRLYTGKEKIPTLAYEMIVDHSSRVLSVTKGYEGSQNEKTIVRLDKAIS*IRKDEPYVSTEFTLIYADGTVTTHKGVFSIVDGGYHKWRILVCPMKNPGSAETILWMQRLESVRKDV 411 P + +R YTGKE PT+AY++ VDH+ RVL+VT G+ GS N+K+I+R D A++ IR+D Y EFT+ ADGT KG + +VD GYHKW L+ P K P + + +RLESVRKDV Sbjct: 3 PYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDV 123
BLAST of mRNA_H-paniculata_contig13481.2166.1 vs. uniprot
Match: A0A6H5J792_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J792_9PHAE) HSP 1 Score: 117 bits (292), Expect = 3.520e-31 Identity = 53/107 (49.53%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 1 GAMGSTDITHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSSRVLSVTKGYEGSQNEKTIVRLDKAIS*IRKDEPYVSTEFTLIYADGTVTTHKGVFSIVDGGYHK 321 GA+GSTD+TH+ W P S +R YTGKE +P++AY+ IVDH+ R+L+VTKG+ G+ N+KTI+ D A++ IR+D Y +TL +G KG +SIVD GY+K Sbjct: 11 GAIGSTDVTHIRWAFCPYSWARQYTGKEGLPSIAYQAIVDHTGRILAVTKGFAGAMNDKTIIWYDTAVAKIRRDPVYTEKVYTLSDKNGQPFERKGNYSIVDNGYNK 117
BLAST of mRNA_H-paniculata_contig13481.2166.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 122 bits (306), Expect = 1.540e-30 Identity = 57/122 (46.72%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 1 GAMGSTDITHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSSRVLSVTKGYEGSQNEKTIVRLDKAIS*IRKDEPYVSTEFTLIYADGTVTTHKGVFSIVDGGYHKWRILVCPMKNPGSAE 366 GAMGS D+TH+ W P + R YTGKE +PT+ Y++ V+H+ R +VT+G+ GS N+KTIV D A+ IR D+ Y F + DGT TT KG + +VD GYHKW+IL+ + P E Sbjct: 197 GAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVPAERE 318
BLAST of mRNA_H-paniculata_contig13481.2166.1 vs. uniprot
Match: A0A7S4F9V1_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F9V1_CHRCT) HSP 1 Score: 123 bits (309), Expect = 2.390e-30 Identity = 61/138 (44.20%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 1 GAMGSTDITHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSSRVLSVTK-GYEGSQNEKTIVRLDKAIS*IRKDEPYVSTEFTLIYADGTVTTHKGVFSIVDGGYHKWRILVCPMKNPGSAETILWMQRLESVRKDV 411 GA+ S D HVHW P + GKE PT Y + VDHS R+L VT + G++++KT+ R D I + + E Y EF + DGT T KG++++VDGGYH WR L+CP+K+ + W +RLESVRKDV Sbjct: 246 GAICSIDGVHVHWNRCPCKQWAAHKGKEGYPTRVYNVAVDHSRRILHVTDHSHPGARSDKTLARSDDLIVGMHEGELYSQVEFEVFRDDGTTKTIKGLYALVDGGYHTWRCLMCPVKSAQQMDVKYWSKRLESVRKDV 383 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13481.2166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13481.2166.1 >prot_H-paniculata_contig13481.2166.1 ID=prot_H-paniculata_contig13481.2166.1|Name=mRNA_H-paniculata_contig13481.2166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp MGSTDITHVHWGCAPVSHSRLYTGKEKIPTLAYEMIVDHSSRVLSVTKGYback to top mRNA from alignment at H-paniculata_contig13481:1775..2829+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13481.2166.1 ID=mRNA_H-paniculata_contig13481.2166.1|Name=mRNA_H-paniculata_contig13481.2166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1055bp|location=Sequence derived from alignment at H-paniculata_contig13481:1775..2829+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13481:1775..2829+ >mRNA_H-paniculata_contig13481.2166.1 ID=mRNA_H-paniculata_contig13481.2166.1|Name=mRNA_H-paniculata_contig13481.2166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=408bp|location=Sequence derived from alignment at H-paniculata_contig13481:1775..2829+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |