prot_H-paniculata_contig13461.2157.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13461.2157.1
Unique Nameprot_H-paniculata_contig13461.2157.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length111
Homology
[Close]
BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: D8LM42_ECTSI (Rab7, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM42_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 7.490e-54
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0 
Query:   21 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 111
            VGKTSLMNQYV K FSNQYKATIGADFLTK+ VI+DKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFL+Q
Sbjct:   19 VGKTSLMNQYVNKRFSNQYKATIGADFLTKDTVIDDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLHQ 109
[Close]
BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: A0A5D6XTV2_9STRA (Uncharacterized protein n=2 Tax=Pythium TaxID=4797 RepID=A0A5D6XTV2_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.180e-51
Identity = 81/91 (89.01%), Postives = 88/91 (96.70%), Query Frame = 0 
Query:   21 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 111
            VGKTSLMNQYV + FSNQYKATIGADFLTKEI+I+DKLVT+QIWDTAGQERFQSLGVAFYRGA+ACVLVYDITNPKSFE+LDSWR+EFL Q
Sbjct:   19 VGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMIDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDSWRDEFLAQ 109
[Close]
BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: W2PUJ2_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PUJ2_PHYPN)

HSP 1 Score: 168 bits (426), Expect = 1.640e-51
Identity = 79/91 (86.81%), Postives = 88/91 (96.70%), Query Frame = 0 
Query:   21 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 111
            VGKTSLMNQYV + FSNQYKATIGADFLTKEI+++DKLVT+QIWDTAGQERFQSLGVAFYRGA+ACVLVYDITNPKSFE+LD+WR+EFL Q
Sbjct:   19 VGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQ 109
[Close]
BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: A0A7S2V146_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V146_9STRA)

HSP 1 Score: 169 bits (428), Expect = 3.690e-51
Identity = 80/91 (87.91%), Postives = 85/91 (93.41%), Query Frame = 0 
Query:   21 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 111
            VGKTSLMNQYV K FS QYKATIGADFLTKE+ I+DKLVTLQIWDTAGQERFQSLGVAFYRGA+AC+LVYDITNPKSF+ LDSWREEFL Q
Sbjct:   19 VGKTSLMNQYVNKRFSTQYKATIGADFLTKEVTIDDKLVTLQIWDTAGQERFQSLGVAFYRGADACILVYDITNPKSFDNLDSWREEFLVQ 109
[Close]
BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: A0A024GCR9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GCR9_9STRA)

HSP 1 Score: 171 bits (432), Expect = 4.690e-51
Identity = 82/111 (73.87%), Postives = 95/111 (85.59%), Query Frame = 0 
Query:    1 RSITHKNCLYLSVSTRCFFRVGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 111
            R++ H+  + L ++      VGKTSLMNQYV + FSNQYKATIGADFLTKE V +DKLVTLQIWDTAGQERFQSLGVAFYRGA+AC+LVYDITNPKSF++LDSWR+EFL Q
Sbjct:   58 RNMAHRKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEFVFDDKLVTLQIWDTAGQERFQSLGVAFYRGADACILVYDITNPKSFQKLDSWRDEFLVQ 168
[Close]
BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: A0A0G4GVC2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GVC2_VITBC)

HSP 1 Score: 168 bits (426), Expect = 6.770e-51
Identity = 79/91 (86.81%), Postives = 86/91 (94.51%), Query Frame = 0 
Query:   21 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 111
            VGKTSLMNQYV K F+NQYKATIGADFLTKE++I+DKLVTLQIWDTAGQERFQSLGVAFYRGA+ CVLV+D+TNPKSFE LDSWREEFL Q
Sbjct:   19 VGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMIDDKLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNPKSFENLDSWREEFLVQ 109
[Close]
BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: H3G9D1_PHYRM (Uncharacterized protein n=39 Tax=Oomycota TaxID=4762 RepID=H3G9D1_PHYRM)

HSP 1 Score: 168 bits (426), Expect = 8.360e-51
Identity = 79/91 (86.81%), Postives = 88/91 (96.70%), Query Frame = 0 
Query:   21 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 111
            VGKTSLMNQYV + FSNQYKATIGADFLTKEI+++DKLVT+QIWDTAGQERFQSLGVAFYRGA+ACVLVYDITNPKSFE+LD+WR+EFL Q
Sbjct:   19 VGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQ 109
[Close]
BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: C5L9N0_PERM5 (Rab7, putative (Fragment) n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L9N0_PERM5)

HSP 1 Score: 163 bits (412), Expect = 6.500e-50
Identity = 77/91 (84.62%), Postives = 83/91 (91.21%), Query Frame = 0 
Query:   21 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 111
            VGKTSLMNQYV K FS QYKATIGADFLTKE+ I+DK+VTLQIWDTAGQERFQSLG+AFYRGA+ C LVYDITNPKSFE LDSWR+EFL Q
Sbjct:   21 VGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTIDDKVVTLQIWDTAGQERFQSLGMAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQ 111
[Close]
BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: A0A131ZX67_SARSC (Ras-related protein Rab-7a-like protein n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A131ZX67_SARSC)

HSP 1 Score: 162 bits (411), Expect = 1.570e-49
Identity = 74/91 (81.32%), Postives = 85/91 (93.41%), Query Frame = 0 
Query:   21 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 111
            VGKTSLMNQYV K FSNQYKATIGADFLTKE++++D+LVT+QIWDTAGQERFQSLGVAFYRGA+ CVLVYD+T+P SF+ LDSWR+EFL Q
Sbjct:   19 VGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPGSFKSLDSWRDEFLIQ 109
[Close]
BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: A0A7S0ZRX9_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZRX9_NOCSC)

HSP 1 Score: 164 bits (416), Expect = 2.440e-49
Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 0 
Query:   21 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 111
            VGKTSLMNQYV K F+NQYKATIGADFLTKE+ I+DK+VTLQIWDTAGQERFQSLGVAFYRGA+ CVLVYD+T PKSFE LDSWR+EFL Q
Sbjct:   20 VGKTSLMNQYVNKKFTNQYKATIGADFLTKEVTIDDKVVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDMTQPKSFESLDSWRDEFLVQ 110
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM42_ECTSI7.490e-5493.41Rab7, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5D6XTV2_9STRA1.180e-5189.01Uncharacterized protein n=2 Tax=Pythium TaxID=4797... [more]
W2PUJ2_PHYPN1.640e-5186.81Uncharacterized protein n=7 Tax=Phytophthora paras... [more]
A0A7S2V146_9STRA3.690e-5187.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A024GCR9_9STRA4.690e-5173.87Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A0G4GVC2_VITBC6.770e-5186.81Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
H3G9D1_PHYRM8.360e-5186.81Uncharacterized protein n=39 Tax=Oomycota TaxID=47... [more]
C5L9N0_PERM56.500e-5084.62Rab7, putative (Fragment) n=1 Tax=Perkinsus marinu... [more]
A0A131ZX67_SARSC1.570e-4981.32Ras-related protein Rab-7a-like protein n=1 Tax=Sa... [more]
A0A7S0ZRX9_NOCSC2.440e-4984.62Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 11..32
score: 25.17
coord: 34..50
score: 35.51
coord: 52..74
score: 50.83
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 21..111
e-value: 0.0077
score: -80.3
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 21..111
e-value: 0.0059
score: -62.0
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 19..111
e-value: 8.9E-17
score: 71.7
NoneNo IPR availableGENE3D3.40.50.300coord: 19..111
e-value: 1.1E-36
score: 127.9
NoneNo IPR availablePANTHERPTHR24073:SF1021RAS-RELATED PROTEIN RABG3Ecoord: 20..108
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 20..108
NoneNo IPR availablePROSITEPS51419RABcoord: 2..111
score: 19.049
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 20..107
e-value: 1.1E-15
score: 55.8
IPR001806Small GTPasePFAMPF00071Rascoord: 21..108
e-value: 1.1E-34
score: 119.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 20..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13461contigH-paniculata_contig13461:5983..6931 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13461.2157.1mRNA_H-paniculata_contig13461.2157.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13461 5983..6931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13461.2157.1 ID=prot_H-paniculata_contig13461.2157.1|Name=mRNA_H-paniculata_contig13461.2157.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
RSITHKNCLYLSVSTRCFFRVGKTSLMNQYVKKAFSNQYKATIGADFLTK
EIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQ
LDSWREEFLYQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase