mRNA_H-paniculata_contig13461.2157.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13461.2157.1
Unique NamemRNA_H-paniculata_contig13461.2157.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: D8LM42_ECTSI (Rab7, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM42_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 7.490e-54
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 1 
Query:   61 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 333
            VGKTSLMNQYV K FSNQYKATIGADFLTK+ VI+DKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFL+Q
Sbjct:   19 VGKTSLMNQYVNKRFSNQYKATIGADFLTKDTVIDDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLHQ 109
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BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: A0A5D6XTV2_9STRA (Uncharacterized protein n=2 Tax=Pythium TaxID=4797 RepID=A0A5D6XTV2_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.180e-51
Identity = 81/91 (89.01%), Postives = 88/91 (96.70%), Query Frame = 1 
Query:   61 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 333
            VGKTSLMNQYV + FSNQYKATIGADFLTKEI+I+DKLVT+QIWDTAGQERFQSLGVAFYRGA+ACVLVYDITNPKSFE+LDSWR+EFL Q
Sbjct:   19 VGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMIDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDSWRDEFLAQ 109
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BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: W2PUJ2_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PUJ2_PHYPN)

HSP 1 Score: 168 bits (426), Expect = 1.640e-51
Identity = 79/91 (86.81%), Postives = 88/91 (96.70%), Query Frame = 1 
Query:   61 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 333
            VGKTSLMNQYV + FSNQYKATIGADFLTKEI+++DKLVT+QIWDTAGQERFQSLGVAFYRGA+ACVLVYDITNPKSFE+LD+WR+EFL Q
Sbjct:   19 VGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQ 109
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BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: A0A7S2V146_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V146_9STRA)

HSP 1 Score: 169 bits (428), Expect = 3.690e-51
Identity = 80/91 (87.91%), Postives = 85/91 (93.41%), Query Frame = 1 
Query:   61 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 333
            VGKTSLMNQYV K FS QYKATIGADFLTKE+ I+DKLVTLQIWDTAGQERFQSLGVAFYRGA+AC+LVYDITNPKSF+ LDSWREEFL Q
Sbjct:   19 VGKTSLMNQYVNKRFSTQYKATIGADFLTKEVTIDDKLVTLQIWDTAGQERFQSLGVAFYRGADACILVYDITNPKSFDNLDSWREEFLVQ 109
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BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: A0A024GCR9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GCR9_9STRA)

HSP 1 Score: 171 bits (432), Expect = 4.690e-51
Identity = 82/111 (73.87%), Postives = 95/111 (85.59%), Query Frame = 1 
Query:    1 RSITHKNCLYLSVSTRCFFRVGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 333
            R++ H+  + L ++      VGKTSLMNQYV + FSNQYKATIGADFLTKE V +DKLVTLQIWDTAGQERFQSLGVAFYRGA+AC+LVYDITNPKSF++LDSWR+EFL Q
Sbjct:   58 RNMAHRKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEFVFDDKLVTLQIWDTAGQERFQSLGVAFYRGADACILVYDITNPKSFQKLDSWRDEFLVQ 168
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BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: A0A0G4GVC2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GVC2_VITBC)

HSP 1 Score: 168 bits (426), Expect = 6.770e-51
Identity = 79/91 (86.81%), Postives = 86/91 (94.51%), Query Frame = 1 
Query:   61 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 333
            VGKTSLMNQYV K F+NQYKATIGADFLTKE++I+DKLVTLQIWDTAGQERFQSLGVAFYRGA+ CVLV+D+TNPKSFE LDSWREEFL Q
Sbjct:   19 VGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMIDDKLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNPKSFENLDSWREEFLVQ 109
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BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: H3G9D1_PHYRM (Uncharacterized protein n=39 Tax=Oomycota TaxID=4762 RepID=H3G9D1_PHYRM)

HSP 1 Score: 168 bits (426), Expect = 8.360e-51
Identity = 79/91 (86.81%), Postives = 88/91 (96.70%), Query Frame = 1 
Query:   61 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 333
            VGKTSLMNQYV + FSNQYKATIGADFLTKEI+++DKLVT+QIWDTAGQERFQSLGVAFYRGA+ACVLVYDITNPKSFE+LD+WR+EFL Q
Sbjct:   19 VGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQ 109
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BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: C5L9N0_PERM5 (Rab7, putative (Fragment) n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L9N0_PERM5)

HSP 1 Score: 163 bits (412), Expect = 6.500e-50
Identity = 77/91 (84.62%), Postives = 83/91 (91.21%), Query Frame = 1 
Query:   61 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 333
            VGKTSLMNQYV K FS QYKATIGADFLTKE+ I+DK+VTLQIWDTAGQERFQSLG+AFYRGA+ C LVYDITNPKSFE LDSWR+EFL Q
Sbjct:   21 VGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTIDDKVVTLQIWDTAGQERFQSLGMAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQ 111
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BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: A0A131ZX67_SARSC (Ras-related protein Rab-7a-like protein n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A131ZX67_SARSC)

HSP 1 Score: 162 bits (411), Expect = 1.570e-49
Identity = 74/91 (81.32%), Postives = 85/91 (93.41%), Query Frame = 1 
Query:   61 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 333
            VGKTSLMNQYV K FSNQYKATIGADFLTKE++++D+LVT+QIWDTAGQERFQSLGVAFYRGA+ CVLVYD+T+P SF+ LDSWR+EFL Q
Sbjct:   19 VGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPGSFKSLDSWRDEFLIQ 109
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BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Match: A0A7S0ZRX9_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZRX9_NOCSC)

HSP 1 Score: 164 bits (416), Expect = 2.440e-49
Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 1 
Query:   61 VGKTSLMNQYVKKAFSNQYKATIGADFLTKEIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLYQ 333
            VGKTSLMNQYV K F+NQYKATIGADFLTKE+ I+DK+VTLQIWDTAGQERFQSLGVAFYRGA+ CVLVYD+T PKSFE LDSWR+EFL Q
Sbjct:   20 VGKTSLMNQYVNKKFTNQYKATIGADFLTKEVTIDDKVVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDMTQPKSFESLDSWRDEFLVQ 110
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13461.2157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM42_ECTSI7.490e-5493.41Rab7, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5D6XTV2_9STRA1.180e-5189.01Uncharacterized protein n=2 Tax=Pythium TaxID=4797... [more]
W2PUJ2_PHYPN1.640e-5186.81Uncharacterized protein n=7 Tax=Phytophthora paras... [more]
A0A7S2V146_9STRA3.690e-5187.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A024GCR9_9STRA4.690e-5173.87Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A0G4GVC2_VITBC6.770e-5186.81Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
H3G9D1_PHYRM8.360e-5186.81Uncharacterized protein n=39 Tax=Oomycota TaxID=47... [more]
C5L9N0_PERM56.500e-5084.62Rab7, putative (Fragment) n=1 Tax=Perkinsus marinu... [more]
A0A131ZX67_SARSC1.570e-4981.32Ras-related protein Rab-7a-like protein n=1 Tax=Sa... [more]
A0A7S0ZRX9_NOCSC2.440e-4984.62Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13461contigH-paniculata_contig13461:5983..6931 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score177.2
Seed ortholog evalue4.3e-42
Seed eggNOG ortholog2880.D8LM42
Preferred nameRAB7A
KEGG koko:K07897,ko:K07976
KEGG Pathwayko04137,ko04138,ko04140,ko04144,ko04145,ko05132,ko05146,ko05152,map04137,map04138,map04140,map04144,map04145,map05132,map05146,map05152
Hectar predicted targeting categorymitochondrion
GOsGO:0000003,GO:0000011,GO:0000045,GO:0000166,GO:0000306,GO:0000322,GO:0000323,GO:0000324,GO:0000325,GO:0000329,GO:0000407,GO:0001555,GO:0001667,GO:0001775,GO:0001845,GO:0001882,GO:0001883,GO:0001894,GO:0002064,GO:0002065,GO:0002066,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002478,GO:0002495,GO:0002504,GO:0003002,GO:0003006,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005811,GO:0005829,GO:0005886,GO:0005938,GO:0006403,GO:0006605,GO:0006622,GO:0006623,GO:0006807,GO:0006810,GO:0006873,GO:0006885,GO:0006886,GO:0006887,GO:0006892,GO:0006896,GO:0006897,GO:0006898,GO:0006906,GO:0006909,GO:0006914,GO:0006928,GO:0006950,GO:0006955,GO:0006970,GO:0006979,GO:0006996,GO:0007028,GO:0007033,GO:0007034,GO:0007035,GO:0007040,GO:0007041,GO:0007154,GO:0007165,GO:0007174,GO:0007264,GO:0007265,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007297,GO:0007298,GO:0007389,GO:0007444,GO:0007447,GO:0007450,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008333,GO:0008593,GO:0009056,GO:0009057,GO:0009628,GO:0009651,GO:0009653,GO:0009705,GO:0009888,GO:0009893,GO:0009894,GO:0009896,GO:0009953,GO:0009966,GO:0009968,GO:0009987,GO:0009994,GO:0010008,GO:0010087,GO:0010089,GO:0010171,GO:0010506,GO:0010508,GO:0010604,GO:0010623,GO:0010631,GO:0010638,GO:0010639,GO:0010646,GO:0010648,GO:0012501,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016032,GO:0016043,GO:0016049,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016237,GO:0016462,GO:0016477,GO:0016482,GO:0016787,GO:0016817,GO:0016818,GO:0017016,GO:0017048,GO:0017076,GO:0017111,GO:0017157,GO:0019001,GO:0019003,GO:0019058,GO:0019076,GO:0019222,GO:0019538,GO:0019725,GO:0019867,GO:0019882,GO:0019884,GO:0019886,GO:0019898,GO:0019899,GO:0019953,GO:0022406,GO:0022412,GO:0022414,GO:0022607,GO:0022615,GO:0023051,GO:0023052,GO:0023057,GO:0030003,GO:0030004,GO:0030100,GO:0030133,GO:0030139,GO:0030141,GO:0030154,GO:0030163,GO:0030424,GO:0030641,GO:0030658,GO:0030659,GO:0030666,GO:0030667,GO:0030670,GO:0030672,GO:0030707,GO:0030855,GO:0031090,GO:0031224,GO:0031225,GO:0031267,GO:0031300,GO:0031312,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031410,GO:0031902,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031982,GO:0032009,GO:0032195,GO:0032258,GO:0032386,GO:0032388,GO:0032419,GO:0032482,GO:0032501,GO:0032502,GO:0032504,GO:0032509,GO:0032510,GO:0032535,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032889,GO:0032940,GO:0033036,GO:0033043,GO:0033227,GO:0033267,GO:0033365,GO:0034045,GO:0034613,GO:0034727,GO:0035220,GO:0035222,GO:0035295,GO:0035556,GO:0035639,GO:0035890,GO:0035891,GO:0036094,GO:0036186,GO:0036230,GO:0040007,GO:0040008,GO:0040011,GO:0042058,GO:0042059,GO:0042119,GO:0042144,GO:0042147,GO:0042176,GO:0042592,GO:0042599,GO:0042886,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043170,GO:0043195,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043277,GO:0043299,GO:0043312,GO:0043679,GO:0043900,GO:0043901,GO:0043902,GO:0043903,GO:0044085,GO:0044087,GO:0044088,GO:0044089,GO:0044090,GO:0044126,GO:0044130,GO:0044144,GO:0044146,GO:0044232,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044306,GO:0044352,GO:0044354,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0044703,GO:0044766,GO:0044804,GO:0044877,GO:0045022,GO:0045055,GO:0045184,GO:0045202,GO:0045321,GO:0045324,GO:0045335,GO:0045453,GO:0045732,GO:0045807,GO:0045851,GO:0045920,GO:0045921,GO:0045926,GO:0046849,GO:0046903,GO:0046907,GO:0048002,GO:0048190,GO:0048193,GO:0048284,GO:0048308,GO:0048365,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048548,GO:0048549,GO:0048583,GO:0048585,GO:0048588,GO:0048589,GO:0048599,GO:0048609,GO:0048731,GO:0048771,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0048878,GO:0050657,GO:0050658,GO:0050789,GO:0050792,GO:0050794,GO:0050801,GO:0050896,GO:0051020,GO:0051036,GO:0051046,GO:0051047,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051247,GO:0051452,GO:0051453,GO:0051641,GO:0051649,GO:0051674,GO:0051701,GO:0051704,GO:0051716,GO:0052126,GO:0052192,GO:0055067,GO:0055080,GO:0055082,GO:0060249,GO:0060255,GO:0060341,GO:0060429,GO:0060627,GO:0061024,GO:0061025,GO:0061191,GO:0061192,GO:0061462,GO:0061724,GO:0061883,GO:0061912,GO:0061919,GO:0065007,GO:0065008,GO:0070382,GO:0070727,GO:0070925,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072583,GO:0072594,GO:0072665,GO:0072666,GO:0080090,GO:0080171,GO:0090066,GO:0090130,GO:0090132,GO:0090174,GO:0090382,GO:0090383,GO:0090385,GO:0090386,GO:0090387,GO:0097159,GO:0097208,GO:0097367,GO:0097458,GO:0097576,GO:0097708,GO:0097734,GO:0098563,GO:0098588,GO:0098657,GO:0098771,GO:0098793,GO:0098805,GO:0098852,GO:0098927,GO:0098993,GO:0099501,GO:0099503,GO:0099568,GO:0120025,GO:0120038,GO:0140112,GO:0150034,GO:1901184,GO:1901185,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902579,GO:1902581,GO:1902583,GO:1903530,GO:1903531,GO:1903532,GO:1903541,GO:1903542,GO:1903543,GO:1903649,GO:1903651,GO:1904978,GO:1904979,GO:1905037,GO:1905162,GO:1905177,GO:1905301,GO:1905303,GO:1905365,GO:1905366,GO:1905394,GO:1990182,GO:1990816,GO:2000641,GO:2000643
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0394@1,KOG0394@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Exons2
Model size333
Cds size333
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929067.263471-CDS-H-paniculata_contig13461:5982..61291622929067.263471-CDS-H-paniculata_contig13461:5982..6129Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13461 5983..6129 -
1691480718.8627872-CDS-H-paniculata_contig13461:5982..61291691480718.8627872-CDS-H-paniculata_contig13461:5982..6129Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13461 5983..6129 -
1622929067.279221-CDS-H-paniculata_contig13461:6745..69311622929067.279221-CDS-H-paniculata_contig13461:6745..6931Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13461 6746..6931 -
1691480718.8802316-CDS-H-paniculata_contig13461:6745..69311691480718.8802316-CDS-H-paniculata_contig13461:6745..6931Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13461 6746..6931 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13461.2157.1prot_H-paniculata_contig13461.2157.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13461 5983..6931 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13461.2157.1

>prot_H-paniculata_contig13461.2157.1 ID=prot_H-paniculata_contig13461.2157.1|Name=mRNA_H-paniculata_contig13461.2157.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
RSITHKNCLYLSVSTRCFFRVGKTSLMNQYVKKAFSNQYKATIGADFLTK
EIVIEDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQ
LDSWREEFLYQ
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mRNA from alignment at H-paniculata_contig13461:5983..6931-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13461.2157.1 ID=mRNA_H-paniculata_contig13461.2157.1|Name=mRNA_H-paniculata_contig13461.2157.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=949bp|location=Sequence derived from alignment at H-paniculata_contig13461:5983..6931- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGATCCATAACACATAAAAATTGCTTATATTTGTCTGTTTCGACTCGTTG
TTTTTTCAGGGTGGGAAAAACTTCGCTGATGAACCAATACGTCAAAAAGG
CGTTCTCGAATCAGTACAAGGCGACCATCGGGGCAGACTTTCTTACCAAG
GAGATCGTTATCGAAGATAAGCTTGTCACATTGCAGGTGATGAATCACAG
GAGTGTCGTAAAGTCACCGCTGCACTGCAATAGTAGTAGGGTATGACCAC
AGCTATTCGTGTATTCATATTCCAGTGCTCTGTCCTCGGCACAGGCACAA
GGATTCGCTGCGCTCGCCGAGACAAGTTACGCTCACCGGAAAAGGTTTTT
TCAGAAGTACTTAAGTGTTAGTTACAGACTGCAAAGCTGTTCCGAAACGA
CAACAAGGTTACCATATCACGTAACAACAATATCTTGAGGTCTTGAGCCT
TGTACAGCCTGCAAAGGTACACAGCGCGATTTGTCCGCACCATGTTGTAC
GTTAGCAGTAGTAGGGGTGTGATGCAACTACGTGTATACACAGCACATAA
AAAACAAGTCGTGGTGATTTTTTTCGAAGAGGGGGGAAGTCCAAAACCTC
CGCTTGGTTTTTGGATGTGTCTTGAAAAATATCGTAAAATGAGACGGTTC
CAGAAGCATCGTTGATTTTTTTGTTGTTGTTTTATCTCCTCACCTCACTA
CTCGACATAGAATCGTCATGTGTAAGATATGACCCCTTGACCTCTTTCTG
ACCTGGTCCCGTTTTTTCTTTTTTTCCCCTTTTTCGCTCTTTTTGTTTGC
AGATCTGGGACACGGCGGGACAGGAGCGTTTTCAAAGTCTTGGGGTGGCG
TTTTACAGGGGGGCGGAGGCCTGCGTGTTGGTGTACGATATCACCAACCC
GAAGTCGTTCGAACAGTTGGACAGTTGGCGCGAAGAGTTCTTGTATCAG
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Coding sequence (CDS) from alignment at H-paniculata_contig13461:5983..6931-

>mRNA_H-paniculata_contig13461.2157.1 ID=mRNA_H-paniculata_contig13461.2157.1|Name=mRNA_H-paniculata_contig13461.2157.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at H-paniculata_contig13461:5983..6931- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGATCCATAACACATAAAAATTGCTTATATTTGTCTGTTTCGACTCGTTG
TTTTTTCAGGGTGGGAAAAACTTCGCTGATGAACCAATACGTCAAAAAGG
CGTTCTCGAATCAGTACAAGGCGACCATCGGGGCAGACTTTCTTACCAAG
GAGATCGTTATCGAAGATAAGCTTGTCACATTGCAGAGATCCATAACACA
TAAAAATTGCTTATATTTGTCTGTTTCGACTCGTTGTTTTTTCAGGGTGG
GAAAAACTTCGCTGATGAACCAATACGTCAAAAAGGCGTTCTCGAATCAG
TACAAGGCGACCATCGGGGCAGACTTTCTTACCAAGGAGATCGTTATCGA
AGATAAGCTTGTCACATTGCAGATCTGGGACACGGCGGGACAGGAGCGTT
TTCAAAGTCTTGGGGTGGCGTTTTACAGGGGGGCGGAGGCCTGCGTGTTG
GTGTACGATATCACCAACCCGAAGTCGTTCGAACAGTTGGACAGTTGGCG
CGAAGAGTTCTTGTATCAGATCTGGGACACGGCGGGACAGGAGCGTTTTC
AAAGTCTTGGGGTGGCGTTTTACAGGGGGGCGGAGGCCTGCGTGTTGGTG
TACGATATCACCAACCCGAAGTCGTTCGAACAGTTGGACAGTTGGCGCGA
AGAGTTCTTGTATCAG
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