prot_H-paniculata_contig13437.2145.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13437.2145.1
Unique Nameprot_H-paniculata_contig13437.2145.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length67
Homology
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BLAST of mRNA_H-paniculata_contig13437.2145.1 vs. uniprot
Match: A0A8F0FDJ8_9PHAE (Ribosomal protein S8 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDJ8_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 6.240e-27
Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0 
Query:    1 MLPNLIHRLRHGLMAYHVSVRFEEARFCIKNFNVLWEEGLIRRCKKMDNGIIFIFLLYCERYSR 64
            ML +L++RLR+GLM YH+SV FEEARFC+K  NVLW+EGLIR  KKMDNGIIFIFLLYC  YS+
Sbjct:    1 MLSSLMYRLRNGLMGYHISVSFEEARFCVKFLNVLWDEGLIRGYKKMDNGIIFIFLLYCGGYSQ 64
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13437.2145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8F0FDJ8_9PHAE6.240e-2773.44Ribosomal protein S8 n=1 Tax=Protohalopteris sp. T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1370.30coord: 1..63
e-value: 3.4E-5
score: 25.9
IPR035987Ribosomal protein S8 superfamilySUPERFAMILY56047Ribosomal protein S8coord: 2..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13437contigH-paniculata_contig13437:3458..3658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13437.2145.1mRNA_H-paniculata_contig13437.2145.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13437 3458..3658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13437.2145.1 ID=prot_H-paniculata_contig13437.2145.1|Name=mRNA_H-paniculata_contig13437.2145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
MLPNLIHRLRHGLMAYHVSVRFEEARFCIKNFNVLWEEGLIRRCKKMDNG
IIFIFLLYCERYSRGSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035987Ribosomal_S8_sf