mRNA_H-paniculata_contig13436.2144.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig13436.2144.1 vs. uniprot
Match: D8LH46_ECTSI (Calmodulin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH46_ECTSI) HSP 1 Score: 223 bits (569), Expect = 4.150e-70 Identity = 112/127 (88.19%), Postives = 122/127 (96.06%), Query Frame = 1
Query: 1 QDGNGEIDLNELRTVMTSLGYNPTDKQLQDMMDKVDLDGNGFICFAEFVMMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGTIMRQLGAKLSDAEIDLLVKEADVDGDGQVDINEFLKIMYS 381
+DG+GEIDL+ELRTVMTSLGY+PT+KQL+DMM KVDLDGNG I FAEFV MMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELG IMRQLGAKL+D+EI+LLV+EADVDGDGQVDINEFLKIMYS
Sbjct: 29 KDGSGEIDLDELRTVMTSLGYSPTNKQLEDMMAKVDLDGNGLINFAEFVTMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGNIMRQLGAKLTDSEINLLVQEADVDGDGQVDINEFLKIMYS 155
BLAST of mRNA_H-paniculata_contig13436.2144.1 vs. uniprot
Match: A0A6H5JMU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMU5_9PHAE) HSP 1 Score: 175 bits (444), Expect = 1.930e-51 Identity = 93/121 (76.86%), Postives = 100/121 (82.64%), Query Frame = 1
Query: 46 MTSLGYNPTDKQLQDMMDK----------------VDLDGNGFICFAEFVMMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGTIMRQLGAKLSDAEIDLLVKEADVDGDGQVDINE 360
MTSLGY+PT+KQL+DMM K VDLDGNG I FAEFV MMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELG IMRQLGAKL+D+EI+LLV+EADVDGDGQVDINE
Sbjct: 1 MTSLGYSPTNKQLEDMMAKASSGSVFFLEWAVLLLVDLDGNGLINFAEFVTMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGNIMRQLGAKLTDSEINLLVQEADVDGDGQVDINE 121
BLAST of mRNA_H-paniculata_contig13436.2144.1 vs. uniprot
Match: A0A835YUT0_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT0_9STRA) HSP 1 Score: 154 bits (388), Expect = 7.560e-43 Identity = 81/126 (64.29%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 1 QDGNGEIDLNELRTVMTSLGYNPTDKQLQDMMDKVDLDGNGFICFAEFVMMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGTIMRQLGAKLSDAEIDLLVKEADVDGDGQVDINEFLKIMY 378
+D +GEID EL TVM SLGYNPTD+QL DMM KVD+DGNG I F EFV+MMRKC+V+TDFDR+I EAFK FD+DGSG+ID +EL IM+ LGA LSD EI+LLV+E FLKIMY
Sbjct: 29 KDQSGEIDEYELGTVMRSLGYNPTDEQLHDMMLKVDIDGNGSISFDEFVIMMRKCEVETDFDREITEAFKVFDKDGSGSIDKEELTAIMKGLGANLSDQEIELLVREXXXXXXXXXXXXXFLKIMY 154
BLAST of mRNA_H-paniculata_contig13436.2144.1 vs. uniprot
Match: A0A835Z1Q3_9STRA (Calmodulin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Q3_9STRA) HSP 1 Score: 151 bits (382), Expect = 4.260e-42 Identity = 79/126 (62.70%), Postives = 98/126 (77.78%), Query Frame = 1
Query: 1 QDGNGEIDLNELRTVMTSLGYNPTDKQLQDMMDKVDLDGNGFICFAEFVMMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGTIMRQLGAKLSDAEIDLLVKEADVDGDGQVDINEFLKIMY 378
+DGNGEID EL TVM SLGYNPTD+QL DMM +DLDGN EFV MMRKC+V+TDFDR++REAF+ FD+DGSGAID EL IM+ A+I+LLV+EADVDGDG ++++EF++IMY
Sbjct: 30 KDGNGEIDEIELSTVMRSLGYNPTDEQLHDMMLNIDLDGN------EFVTMMRKCEVETDFDREVREAFQVFDRDGSGAIDKAELTVIMK--------AKIELLVREADVDGDGAINLDEFIRIMY 141
BLAST of mRNA_H-paniculata_contig13436.2144.1 vs. uniprot
Match: A0A835YVF8_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF8_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.020e-38 Identity = 71/127 (55.91%), Postives = 93/127 (73.23%), Query Frame = 1
Query: 1 QDGNGEIDLNELRTVMTSLGYNPTDKQLQDMMDKVDLDGNGFICFAEFVMMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGTIMRQLGAKLSDAEIDLLVKEADVDGDGQVDINEFLKIMYS 381
+DGNGEIDL EL VM SLGY+PTDKQL+DM+ + F EFV MMR+C++ TDF+ +I+ AF+FFD+DG G I ++EL ++MR LGA LSD EI LLVKEAD +GDG + ++EF +YS
Sbjct: 25 KDGNGEIDLKELGIVMRSLGYSPTDKQLRDMLKQAXXXXXXXXTFNEFVEMMRRCELSTDFEMEIKGAFEFFDKDGDGDITSEELASVMRGLGANLSDQEIALLVKEADKNGDGAISLHEFTTFLYS 151
BLAST of mRNA_H-paniculata_contig13436.2144.1 vs. uniprot
Match: A0A8J1ULM4_OWEFU (Ofus.G151864 protein (Fragment) n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1ULM4_OWEFU) HSP 1 Score: 138 bits (347), Expect = 5.440e-37 Identity = 68/127 (53.54%), Postives = 92/127 (72.44%), Query Frame = 1
Query: 1 QDGNGEIDLNELRTVMTSLGYNPTDKQLQDMMDKVDLDGNGFICFAEFVMMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGTIMRQLGAKLSDAEIDLLVKEADVDGDGQVDINEFLKIMYS 381
+DG+G I EL TVM SLG NPT+ +LQ+M+DKVD DGNG I F EF+ MM + DTD + +I+EAF+ FD+DG+G I EL +M G KL+D E+D ++K+AD+DGDGQV+ EF+K+M S
Sbjct: 7 KDGDGTITTKELGTVMRSLGQNPTEAELQNMIDKVDADGNGTIDFPEFITMMARKMKDTDSEEEIKEAFRVFDKDGNGFISAAELRHVMTNHGEKLTDEEVDEMIKDADIDGDGQVNYEEFVKMMMS 133
BLAST of mRNA_H-paniculata_contig13436.2144.1 vs. uniprot
Match: A0A6J8AQJ0_MYTCO (Calmodulin n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8AQJ0_MYTCO) HSP 1 Score: 138 bits (347), Expect = 9.960e-37 Identity = 68/125 (54.40%), Postives = 93/125 (74.40%), Query Frame = 1
Query: 1 QDGNGEIDLNELRTVMTSLGYNPTDKQLQDMMDKVDLDGNGFICFAEFVMMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGTIMRQLGAKLSDAEIDLLVKEADVDGDGQVDINEFLKIM 375
+DG+G I EL VM SLG NP+D++LQD++++VD+DGNG I F EF+ MM K DTD + +IREAF+ FD+DGSG+I +L IM LG KL D E+D +++EAD+DGDGQ+D EF+K+M
Sbjct: 28 KDGDGTISSAELGVVMRSLGQNPSDQELQDLINEVDIDGNGIIDFQEFLTMMAKKMKDTDTEEEIREAFRVFDKDGSGSISANDLRHIMTNLGDKLPDEEVDEMIQEADLDGDGQIDYIEFVKMM 152
BLAST of mRNA_H-paniculata_contig13436.2144.1 vs. uniprot
Match: A0A197JTC6_9FUNG (EF-hand n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A197JTC6_9FUNG) HSP 1 Score: 137 bits (345), Expect = 1.650e-36 Identity = 67/127 (52.76%), Postives = 93/127 (73.23%), Query Frame = 1
Query: 1 QDGNGEIDLNELRTVMTSLGYNPTDKQLQDMMDKVDLDGNGFICFAEFVMMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGTIMRQLGAKLSDAEIDLLVKEADVDGDGQVDINEFLKIMYS 381
+DG+G I EL TVM SLG NPT+ LQDM+++VD DGNG I F EF+ MM + VDTD + +I+EAFK FD+DG+G I EL ++ LG +L+D+E+D ++ EADVDGDGQ++ EF+++M S
Sbjct: 22 KDGDGTITTKELGTVMRSLGQNPTEADLQDMVNEVDADGNGTIDFPEFLTMMARKMVDTDSEEEIKEAFKVFDKDGNGYISAAELRHVLTNLGERLTDSEVDEMIHEADVDGDGQINYEEFVRMMMS 148
BLAST of mRNA_H-paniculata_contig13436.2144.1 vs. uniprot
Match: A0A4V1IYQ4_9FUNG (Calmodulin n=2 Tax=Zoopagomycota TaxID=1913638 RepID=A0A4V1IYQ4_9FUNG) HSP 1 Score: 137 bits (344), Expect = 2.330e-36 Identity = 68/127 (53.54%), Postives = 93/127 (73.23%), Query Frame = 1
Query: 1 QDGNGEIDLNELRTVMTSLGYNPTDKQLQDMMDKVDLDGNGFICFAEFVMMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGTIMRQLGAKLSDAEIDLLVKEADVDGDGQVDINEFLKIMYS 381
+DG+G I EL TVM SLG NPT+ +LQDM+++VD DGNG I F EF+ MM + +TD + +IREAFK FD+D +G I EL +M LG KL+D E+D +++EADVDGDGQ++ +EF+K+M S
Sbjct: 22 KDGDGTITAKELGTVMRSLGQNPTEAELQDMVNEVDADGNGTIDFPEFLTMMARKMKNTDSEEEIREAFKVFDKDSNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKMMMS 148
BLAST of mRNA_H-paniculata_contig13436.2144.1 vs. uniprot
Match: A0A670JEP2_PODMU (Calmodulin-A-like n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670JEP2_PODMU) HSP 1 Score: 135 bits (341), Expect = 6.500e-36 Identity = 65/125 (52.00%), Postives = 94/125 (75.20%), Query Frame = 1
Query: 1 QDGNGEIDLNELRTVMTSLGYNPTDKQLQDMMDKVDLDGNGFICFAEFVMMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGTIMRQLGAKLSDAEIDLLVKEADVDGDGQVDINEFLKIM 375
+DG+G I EL TVM SLG+NPT+ +LQ M+D+VD +G+G + FAEF+ +M K D+D + +IREAF+ FD+DG+G I T EL ++ LG KL+D E+D ++KEADVDGDG+V+ EF+++M
Sbjct: 22 KDGDGAITTKELGTVMRSLGHNPTEAELQSMIDQVDANGSGTVDFAEFLSLMAKQSKDSDSEEEIREAFRVFDKDGNGYISTAELRHVLTNLGEKLTDEEVDEMIKEADVDGDGRVNYEEFVRVM 146 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13436.2144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13436.2144.1 >prot_H-paniculata_contig13436.2144.1 ID=prot_H-paniculata_contig13436.2144.1|Name=mRNA_H-paniculata_contig13436.2144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp MTSLGYNPTDKQLQDMMDKVDLDGNGFICFAEFVMMMRKCKVDTDFDRQIback to top mRNA from alignment at H-paniculata_contig13436:1544..4639- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13436.2144.1 ID=mRNA_H-paniculata_contig13436.2144.1|Name=mRNA_H-paniculata_contig13436.2144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3096bp|location=Sequence derived from alignment at H-paniculata_contig13436:1544..4639- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13436:1544..4639- >mRNA_H-paniculata_contig13436.2144.1 ID=mRNA_H-paniculata_contig13436.2144.1|Name=mRNA_H-paniculata_contig13436.2144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at H-paniculata_contig13436:1544..4639- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |