prot_H-paniculata_contig13423.2139.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13423.2139.1
Unique Nameprot_H-paniculata_contig13423.2139.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1011
Homology
BLAST of mRNA_H-paniculata_contig13423.2139.1 vs. uniprot
Match: A0A6H5JJD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJD0_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 2.230e-111
Identity = 392/1128 (34.75%), Postives = 482/1128 (42.73%), Query Frame = 0
Query:    1 MSGREVGASMTVSLVVNSSFPTAGSSSSVGFPY-----GPYGWTMGPHQSN----EYYAGEGGDRDVLS-PVDEASVF-LSVAMRMGALPVLDANGTGLQDTWVLHSSHALSEANEVEDPDHYTTAALVSRSSDEQVH-----PFWSTTYRWNLTHPPPLAGHVWGAGGGSSGGWGLSXXXXXXXXXXXXXTLFLAVYAECVFTSD-----HDGSGDGGEGRRGCPRRAEEXXXXXXXXXXXXXXXXAADGLWALGVAPRVEFRYCDKETCPMARSVCRVSNGDGGGSNDYVKASKCYCTYGFGGEACAQRIVSYASIIWQTLLLVGTNLAVVPGVRTALSLGATVGSAPAVVLALNGAASAVYHMCDLELTCAGGILSYHALQALDFFFSFFSVAVLVLHLCPMPWDDPLTVAARNYRSPSPPGATLGAEDTDDPFFTRGALDDVPEKGELDYIVGGT---------------------------------------------------------------GGGDGSVVGDMYDNLGLDTMRTAVRTHNFYRRGSGASGDVGG---GSSRASGTISNRAAMLNNRGSGGAWTGDFRSHGVHHSQGSGQSRRDGANLSSDRASSNDVFEAKEETIGNITRQAAARVGDGGSRGSGTRLASLYVCLIPPLLTAVADSPTAGTNLALVFAVCGGLLAFSWGRLVARDMHDLEAKAAREEWVSSRSVAASAGAXXXXXXXXXXXXASAAIGDEEDGGAAEEIDGRENDGKHETRALMCXXXXXXXXXXRGAVGSFRTEGNIISSTIEKMTVATNSSSELRSHEEGEPPYGGNC--EERQRG-----EQRKSXXXXXXXXXSNHDCEAGVLATDNVEASADC---------GDDETPQRQPDGRTRSASCTDTLSGRNQVSTERSSRMRQSERRATGGGR--------GEEFWNDVDRCGSAANRNARCRVRSCCGVLGRLQYRAIRRSCKRVIVDGRLVDWRHAGLGAAGFTAGLMCFAAQGKFPA--WYHMWHSAWHILAMGSTVPLLRARKWGTSGDYPDTPRGSLHSTLSLHGNDKSPIGVGEHRHKTGRQRKGTSWARWGM-----FFGAGLGGRVETRA-SYEMVP 1009
            MSGREVGASM + L VNSS P   ++             P  W MGP  S+    +   G+GG   V S PV++AS   LSVAMR+GALPV+D NGT  + T VL ++ ALSE  E  D                        P+WSTT+ WNLTHPPPL  H    GGG+  G G +             TLF+ V  E    +      ++G G  G GR G  RR                    +  LW LGVAP V FRYCD++ CP+ R  CR + G  G  +DYV  SKCYC YG+GGEAC QR+VSY S++WQ  LLV +NLAVVP VR AL LG   G+APAVVL LNGAASA YHMCDLELTCAGG+LS+H+LQALDFFFSFFSVA LVLHLCPMPWD+PL  +      PS   +T+             A                                                                                 G  G       +      M    R  ++ RR SG          G SR            ++RGS  + + D  +       GSG  RR G            V               A    DG   G+G+RLASLYVCLIPPLL  V D PTAG NLA+VFA+C GLLA +WGRLV RD+ +   +A  EE           G                     E  G+A                   XXXXXXXXXX    G              +    + S   + +H    PP  G    EE ++G     E ++ XXXXXXXX      + G++  D  ++S+           G            T +++  +     N  S    SR R    R+ GG R        G   W   D   +           S    LGR+    + RS +RV V   L+DWR  GLG AGF AGL CFA QG      WYH+WH AWH+LAMGS VP+LRAR+WG +   PD   G                           Q+  ++ A  G+       G G G RVETR  SYEMVP
Sbjct:  765 MSGREVGASMQIRLSVNSSAPLTTAAXXXXXXXXXAHGSPSAWHMGPRFSSRSGGDAGGGDGGAPVVQSVPVEDASSMNLSVAMRVGALPVVDPNGTAREGTVVLWTADALSEPGEANDRPXXXXXXXXXXXXXXXXXXXXDLPWWSTTFTWNLTHPPPL--HPAAVGGGAGLGRGTAAT-----------TLFVVVSGETEAEASGRAKRYEGVGPPG-GRDGMIRRRAAEREVEQGEGGGGDEVGVS--LWTLGVAPEVTFRYCDEDVCPVGRGECRAARG--GSGDDYVTVSKCYCFYGYGGEACGQRVVSYVSLLWQFCLLVLSNLAVVPAVRVALRLGLATGAAPAVVLGLNGAASAFYHMCDLELTCAGGMLSFHSLQALDFFFSFFSVAALVLHLCPMPWDEPLVCSP----PPSSLASTIALPSNSAVVSANPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGAGGRAFAGRQEGPSDRVMLLGDRDQHYPRRSSGXXXXXXXXAHGRSRPRNRSHAGGVASSSRGSLASVSVDGPA------AGSGAHRRGGTGGXXXXXXXXWVXXXXXXXXXXXNPAKAGEEADGS--GAGSRLASLYVCLIPPLLVGVTDHPTAGANLAVVFAMCSGLLASNWGRLVRRDLRE---RALAEEXXXXXXXXXXXGHWRA-----------------ESAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--------------RENALSGSKRGVVNHGVAAPPSSGWSFREEEEQGDSDQNEGKEHXXXXXXXXGEGQAGDQGLVERDKAKSSSHTAGTRVLRGGGXXXXXXXXXHDNTDTSTIINDFIPSNPSSLSVLSRPRA---RSLGGSRRGGXXXXXGSSGWTGADVSSNELXXXXXXXXXST--RLGRIF--PLLRSLRRVAVRWGLLDWRQLGLGVAGFAAGLTCFAVQGTSATAGWYHLWHGAWHVLAMGSAVPILRARRWGPAESDPDEDGGLWGCGXXXXXXXXXXXXXXXXXXXXXXQQPLSARAAVGLRARWESLGPGFGARVETRTPSYEMVP 1821          
BLAST of mRNA_H-paniculata_contig13423.2139.1 vs. uniprot
Match: D8LS70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS70_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 2.060e-110
Identity = 364/1078 (33.77%), Postives = 456/1078 (42.30%), Query Frame = 0
Query:    1 MSGREVGASMTVSLVVNSSFP----TAGSSSSVGFPYGPYGWTMGPHQSNEYYA---GEGGDRDVLS--PVDEASVF-LSVAMRMGALPVLDANGTGLQDTWVLHSSHALSEANEVED--PDHYTTAALVSRSSDEQVHPFWSTTYRWNLTHPPPLAGHVWGAGGGSSGGWGLSXXXXXXXXXXXXXTLFLAVYAECVFTSDHDGSGDGGEGRRG-----CPRRAEEXXXXXXXXXXXXXXXXAADGLWALGVAPRVEFRYCDKETCPMARSVCRVSNGDGGGSNDYVKASKCYCTYGFGGEACAQRIVSYASIIWQTLLLVGTNLAVVPGVRTALSLGATVGSAPAVVLALNGAASAVYHMCDLELTCAGGILSYHALQALDFFFSFFSVAVLVLHLCPMPWDDPLTVAARNYRSPSPP--GATLGAEDTDDPFFTRGALDDVP------------------------------------------------------------------------------------------EKGELDYIVGGTGGGDGSVVGDMYDNLGLDTMRTAVRTHNFYRRGSGASGDVGGGSSRASGTISNRAAMLNNRGSGGAWTGDFRSHGVHHSQGSGQSRRDGANLSSDRASSNDVFEAKEETIGNITRQAAARVGDGGSRGSGTRLASLYVCLIPPLLTAVADSPTAGTNLALVFAVCGGLLAFSWGRLVARDMHDLEAKAAREEWVSSRSVAASAGAXXXXXXXXXXXXASAAIGDEEDGGAAEEIDGRENDGKHETRALMCXXXXXXXXXXRGAVGSFRTEGNIISSTIEKMTVATNSSSELRSHEEGEPPYGGNCEERQRGEQRKSXXXXXXXXXSNHDCEAGVLATDNVEASADCGDDETPQRQPDGRTRSASCTDTLSGRNQV---STERSSRMRQSERRATGGGRGEEFWNDVDRCGSAANRNARCRVRSCCGV--------------LGRLQYRAIRRSCKRVIVDGRLVDWRHAGLGAAGFTAGLMCFAAQGKFPA--WYHMWHSAWHILAMGSTVPLLRARKWGTSGDYPDTPRG 950
            MSGREVGASM + L VNSS P       +++S+     P  W MGP  S+       G GG   V+   PV+ AS   LSVAMR+GALPV+D NGT  + T VL ++ ALSE  E  D  P  Y  ++  + ++D    P+WSTT+ WNLTHPPPL  H    GGG+  G G +             TLF+ V  E    +       GG G  G       RRA E                +   LW LGVAP V FRYCD++ CP+ R  CR + G  G  +DYV  SKCYC YG+GGEAC QR+VSY S++WQ  LLV +NLAVVP VR AL LG   G+APAVVL LNGAASA YHMCDLELTCAGG+LS+H+LQALDFFFSFFSVA LVLHLCPMPWD+PL       RSP P    +T+                                                                                                             ++G  D ++         ++GD   +                R         GG +S   G++++ +                       + GSG  RR G                            A    DGG  G+G+RLASLYVCLIPPLL  V D PTAG NLA+VFA+CGGLLA +WGRLV RD+ +   +A  EE           G              SAA                             XXXXXX    R   G            +    V  + SS     EE E   G   EE++ G++   XXXXX         + G++  D  ++S+        +            TD  +  N     +    S + +   R+ GG           RCG                               LGR+ +R +R S +RV     L+DWR  GLG AGF AGL CFA QG      WYH+WH AWH+LAMGS VP+LRAR+WG +   PD   G
Sbjct:  193 MSGREVGASMEIRLSVNSSAPLMTTATAAAASLSAHGSPSAWHMGPRFSSPSVGDAGGGGGGAPVVQSVPVENASSMNLSVAMRVGALPVVDPNGTAREGTVVLWTADALSEPGEASDRPPPPYDDSSDAAGAADL---PWWSTTFTWNLTHPPPL--HPAAVGGGAGLGRGTAAT-----------TLFVVVSGETEAEASGRAKRYGGVGSTGGRDGKLRRRAAEREVEEGEGGGGDEVGVS---LWTLGVAPEVTFRYCDEDVCPIGRGECRAARG--GSGDDYVTVSKCYCFYGYGGEACGQRVVSYVSLLWQFCLLVLSNLAVVPAVRVALRLGLATGAAPAVVLGLNGAASAFYHMCDLELTCAGGMLSFHSLQALDFFFSFFSVAALVLHLCPMPWDEPLV------RSPPPSLLASTIALPSNSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAFAGRQEGPSDRVL---------LLGDRDQHYPRXXXXXXXXXXAHGRSQPRNRSHAGGVASSRKGSLASVSVDSP-------------------AAGSGAHRRGGTGGXXXXXXXXXXXXXXXXXXXXXNPAKAGEEADGG--GAGSRLASLYVCLIPPLLVGVTDHPTAGANLAVVFAMCGGLLASNWGRLVRRDLRE---RALAEEXXXXXXXXXXQG------HWRAESAESAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNALSRSKRG------------VVNHGVVASPSSGWSFREEEEEGEGEQNEEKELGKEXXXXXXXXAE-------DEGLVGRDRAKSSSHTAGTRVLRGGGXXXXXXHDDTDASTINNDFIPCNPSSLSVLSRPRARSLGG----------SRCGGGVRXXXXXXXXXXXXXXXXXXXXXXXXSTRLGRI-FRLLR-SLRRVAFRRGLLDWRQLGLGVAGFAAGLTCFAVQGTSATAGWYHLWHGAWHVLAMGSAVPILRARRWGPAESDPDEDGG 1173          
BLAST of mRNA_H-paniculata_contig13423.2139.1 vs. uniprot
Match: A0A835Z3I3_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I3_9STRA)

HSP 1 Score: 114 bits (285), Expect = 3.990e-22
Identity = 68/155 (43.87%), Postives = 86/155 (55.48%), Query Frame = 0
Query:  233 ALGVAPRVEFRYCDKETCPMARSVCRVSNGDGGGSNDYVKASKCYCTYGFGGEACAQRIVSYASIIWQTLLLVGTNLAVVPGVRTALSLGATVGSA--PAVVLALNGAASAVYHMCDLELTCAGGILSYHALQALDFFFSFFSVAVLVLHLCPMP 385
            A+ V P V F  C  + CP ++  C VS G   G    V    CYC YG+GGE CA R+VS  +I  Q   LV TNLAVVP V  A  L     SA  P  V  + GA+SA+YH+CD+ + C GG L Y A+Q+LD  FS+ S A +  +L   P
Sbjct:  537 AVMVQPMVSFTRCSSQACPQSKGSCSVSMGTAEG----VLVGTCYCKYGWGGEGCADRLVSTQTIALQAAALVLTNLAVVPSVVLAYRLRKVTDSAAGPGAVFGVAGASSALYHLCDIGIACIGG-LRYGAIQSLDILFSYMSSAAVATYLAYWP 686          
BLAST of mRNA_H-paniculata_contig13423.2139.1 vs. uniprot
Match: A0A2P2JSC7_RHIMU (Uncharacterized protein LOC105134154 isoform X2 n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JSC7_RHIMU)

HSP 1 Score: 66.2 bits (160), Expect = 2.910e-7
Identity = 55/165 (33.33%), Postives = 79/165 (47.88%), Query Frame = 0
Query:  229 DGLWALGVA--------PRVE-FRYCDKETCPMARSV---CRVSNGDGGGSNDYVKASKCYCTYGFGGEACAQRIVSYASIIWQTLLLVGTNLAVVPGVRTALSLGATVGSAPAVVLALNGAASAVYHMCDLELTCAGGILSYHALQALDFFFSFFSVAVLVLHL 381
            +G WA G+         P  + F     E CP   S    C+V+  D  G   Y   S C C    GG  C+  I+SY   IWQ++ L+GTN+A +     AL   A    A  V+   +G +S +YH CD+   CA   LS++ LQ +DF+ SF +V    ++L
Sbjct:  504 EGTWAFGLRHLNTSNNIPHAQPFMSVSVERCPKRCSSYGECKVAL-DASGLTSY---SFCSCDRTHGGFDCSIEIISYHRHIWQSIALIGTNVAAILPAYWALRQKAF---AEWVLFTSSGISSGLYHACDVGTWCA---LSFNVLQFMDFWLSFMAVVSTFVYL 658          
BLAST of mRNA_H-paniculata_contig13423.2139.1 vs. uniprot
Match: A0A8J5HP08_ZINOF (EGF-like domain-containing protein n=4 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5HP08_ZINOF)

HSP 1 Score: 58.5 bits (140), Expect = 6.970e-5
Identity = 52/177 (29.38%), Postives = 76/177 (42.94%), Query Frame = 0
Query:  227 AADGLWALGVAPRVEFRYCDKET-------CPMA---RSVCRVSNGDGGGSNDYVKASKCYCTYGFGGEACAQRIVSYASI------------IWQTLLLVGTNLAVVPGVRTALSLGATVGSAPAVVLALNGAASAVYHMCDLELTCAGGILSYHALQALDFFFSFFSVAVLVLHL 381
            A++G W +G+         D+ T       CP        CR S  + G        S C C    GG  C+  +VS+  I            IWQT+ LV +N A +     AL     +  A  V+   +G +S +YH CD    C   +LS+HALQ LDF+ SF +V    +++
Sbjct:  541 ASEGTWCIGIMHPPRNDNSDRTTMSIWLEGCPSHCNHHGACRNSIDETG----LTFYSYCECDRDHGGFDCSHELVSHQGIEWNTVTASLTWHIWQTIFLVASNGAAILPAYWALR-QKLMAFAEWVIYTASGISSGLYHACDRGTWC---VLSFHALQFLDFWLSFMAVVSTFVYM 709          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13423.2139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JJD0_9PHAE2.230e-11134.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS70_ECTSI2.060e-11033.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z3I3_9STRA3.990e-2243.87EGF-like domain-containing protein n=1 Tax=Tribone... [more]
A0A2P2JSC7_RHIMU2.910e-733.33Uncharacterized protein LOC105134154 isoform X2 n=... [more]
A0A8J5HP08_ZINOF6.970e-529.38EGF-like domain-containing protein n=4 Tax=Zingibe... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021910NGX6/PGAP6/MYMKPFAMPF12036DUF3522coord: 297..384
e-value: 9.8E-10
score: 39.0
IPR021910NGX6/PGAP6/MYMKPANTHERPTHR14319FIVE-SPAN TRANSMEMBRANE PROTEIN M83coord: 273..379
NoneNo IPR availablePANTHERPTHR14319:SF3TRANSMEMBRANE PROTEIN-LIKE PROTEINcoord: 273..379
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 617..1010
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..595
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 596..616

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13423contigH-paniculata_contig13423:554..5890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13423.2139.1mRNA_H-paniculata_contig13423.2139.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13423 272..6219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13423.2139.1 ID=prot_H-paniculata_contig13423.2139.1|Name=mRNA_H-paniculata_contig13423.2139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1011bp
MSGREVGASMTVSLVVNSSFPTAGSSSSVGFPYGPYGWTMGPHQSNEYYA
GEGGDRDVLSPVDEASVFLSVAMRMGALPVLDANGTGLQDTWVLHSSHAL
SEANEVEDPDHYTTAALVSRSSDEQVHPFWSTTYRWNLTHPPPLAGHVWG
AGGGSSGGWGLSGAGQAGTSATTATTLFLAVYAECVFTSDHDGSGDGGEG
RRGCPRRAEEAGGGGGGGGGGDEEGGAADGLWALGVAPRVEFRYCDKETC
PMARSVCRVSNGDGGGSNDYVKASKCYCTYGFGGEACAQRIVSYASIIWQ
TLLLVGTNLAVVPGVRTALSLGATVGSAPAVVLALNGAASAVYHMCDLEL
TCAGGILSYHALQALDFFFSFFSVAVLVLHLCPMPWDDPLTVAARNYRSP
SPPGATLGAEDTDDPFFTRGALDDVPEKGELDYIVGGTGGGDGSVVGDMY
DNLGLDTMRTAVRTHNFYRRGSGASGDVGGGSSRASGTISNRAAMLNNRG
SGGAWTGDFRSHGVHHSQGSGQSRRDGANLSSDRASSNDVFEAKEETIGN
ITRQAAARVGDGGSRGSGTRLASLYVCLIPPLLTAVADSPTAGTNLALVF
AVCGGLLAFSWGRLVARDMHDLEAKAAREEWVSSRSVAASAGAAALDSDT
DGDNDASAAIGDEEDGGAAEEIDGRENDGKHETRALMCCRDDDSGGGGRG
AVGSFRTEGNIISSTIEKMTVATNSSSELRSHEEGEPPYGGNCEERQRGE
QRKSDGRGGGGGGSNHDCEAGVLATDNVEASADCGDDETPQRQPDGRTRS
ASCTDTLSGRNQVSTERSSRMRQSERRATGGGRGEEFWNDVDRCGSAANR
NARCRVRSCCGVLGRLQYRAIRRSCKRVIVDGRLVDWRHAGLGAAGFTAG
LMCFAAQGKFPAWYHMWHSAWHILAMGSTVPLLRARKWGTSGDYPDTPRG
SLHSTLSLHGNDKSPIGVGEHRHKTGRQRKGTSWARWGMFFGAGLGGRVE
TRASYEMVPN*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021910NGX6/PGAP6/MYMK