prot_H-paniculata_contig13415.2133.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig13415.2133.1
Unique Name	prot_H-paniculata_contig13415.2133.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	142

Homology

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BLAST of mRNA_H-paniculata_contig13415.2133.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 4.090e-37
Identity = 68/136 (50.00%), Postives = 89/136 (65.44%), Query Frame = 0

Query:    7 ATLWHRRLGHLNCKSLDLPKKRNHNGVSFDGTVPDCDVCAVEKSHQLAHLKTADHKVKYPFQLVFTDMMGPITPEALGDFKCVSKISDEYTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEDT 142
            A LWHRR+GH++ +SLD+ +K   NGV ++G +  CDVCAV  S Q  H K A +    PFQLV TD+MGP +P ALG F  + K  D++ KW E +L+K K  T+ A Q F QSV+ P   R+E +RADKGGE T
Sbjct:  266 AALWHRRVGHVHGRSLDILRKVQGNGVEYNGELSACDVCAVGNSKQQNHPKRASYDASRPFQLVTTDLMGPFSPPALGGFLYIKKFVDQHIKWNEVFLMKEKSATVDALQLFNQSVLTPHELRLECVRADKGGEYT 401

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BLAST of mRNA_H-paniculata_contig13415.2133.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 1.010e-33
Identity = 66/136 (48.53%), Postives = 86/136 (63.24%), Query Frame = 0

Query:    7 ATLWHRRLGHLNCKSLDLPKKRNHNGVSFDGTVPDCDVCAVEKSHQLAHLKTADHKVKYPFQLVFTDMMGPITPEALGDFKCVSKISDEYTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEDT 142
            A LWHRR+GH+N KSLD+ +++  +G+ + G V DC  C + KS Q  H K A + V  PFQLVF D +GP TP ALG FK  +K  D++TKW E  L+K K  ++ A + F +  VIP   RI  LRADKG E T
Sbjct:  573 ADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFT 708

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BLAST of mRNA_H-paniculata_contig13415.2133.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 1.030e-33
Identity = 66/136 (48.53%), Postives = 86/136 (63.24%), Query Frame = 0

Query:    7 ATLWHRRLGHLNCKSLDLPKKRNHNGVSFDGTVPDCDVCAVEKSHQLAHLKTADHKVKYPFQLVFTDMMGPITPEALGDFKCVSKISDEYTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEDT 142
            A LWHRR+GH+N KSLD+ +++  +G+ + G V DC  C + KS Q  H K A + V  PFQLVF D +GP TP ALG FK  +K  D++TKW E  L+K K  ++ A + F +  VIP   RI  LRADKG E T
Sbjct:  695 ADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFT 830

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BLAST of mRNA_H-paniculata_contig13415.2133.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 1.030e-33
Identity = 66/136 (48.53%), Postives = 86/136 (63.24%), Query Frame = 0

Query:    7 ATLWHRRLGHLNCKSLDLPKKRNHNGVSFDGTVPDCDVCAVEKSHQLAHLKTADHKVKYPFQLVFTDMMGPITPEALGDFKCVSKISDEYTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEDT 142
            A LWHRR+GH+N KSLD+ +++  +G+ + G V DC  C + KS Q  H K A + V  PFQLVF D +GP TP ALG FK  +K  D++TKW E  L+K K  ++ A + F +  VIP   RI  LRADKG E T
Sbjct:  573 ADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFT 708

[Close]

BLAST of mRNA_H-paniculata_contig13415.2133.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.650e-32
Identity = 66/136 (48.53%), Postives = 83/136 (61.03%), Query Frame = 0

Query:    7 ATLWHRRLGHLNCKSLDLPKKRNHNGVSFDGTVPDCDVCAVEKSHQLAHLKTADHKVKYPFQLVFTDMMGPITPEALGDFKCVSKISDEYTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEDT 142
            A LWHRR+GH+N KSLD+ +K  +NGV     V DC  CA+ KS Q  H K A + VK PFQLVF D +GP TP ALG FK  +K  D+ TKW E  L+K K  ++ +   F +  V+P+G  I  LR D G E T
Sbjct:  526 ANLWHRRMGHINSKSLDILRKAPNNGVDHTEDVKDCGPCALGKSTQQPHPKEATYDVKRPFQLVFVDTLGPFTPTALGGFKYATKFVDQQTKWAEIGLMKDKTCSVDSLALFNKGTVVPTGEGIHCLRGDHGTEFT 661

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BLAST of mRNA_H-paniculata_contig13415.2133.1 vs. uniprot
Match: A0A6H5KZ34_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ34_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 6.130e-32
Identity = 61/139 (43.88%), Postives = 80/139 (57.55%), Query Frame = 0

Query:    7 ATLWHRRLGHLNCKSLDLPKKRNHNGVSFDGTVPDCDVCAVEKSHQLAHLKTADHKVKYPFQLVFTDMMGPITPEAL---GDFKCVSKISDEYTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEDT 142
            A  WHRRLGHLN +SLD+ +K    GV +  ++  C VC + K  Q  H K +  ++  P QLV  D MGP+ P A    G F    KI+D+YTK  E YLL+ K DT  A  ++   V    G+RIE +R DKGGE+T
Sbjct:   42 ADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENT 180

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BLAST of mRNA_H-paniculata_contig13415.2133.1 vs. uniprot
Match: A0A6H5KXM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM1_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.670e-30
Identity = 63/136 (46.32%), Postives = 81/136 (59.56%), Query Frame = 0

Query:    7 ATLWHRRLGHLNCKSLDLPKKRNHNGVSFDGTVPDCDVCAVEKSHQLAHLKTADHKVKYPFQLVFTDMMGPITPEALGDFKCVSKISDEYTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEDT 142
            A LWHRR+GH+N KSLD+ +K   NGV + G V DC VC + KS Q  H K   + V  PFQ V  D +GP TP ALG FK  +K  D+ TKW E  L+K +  ++ +   F +  V+P+G RI  LR D G E T
Sbjct:  286 ADLWHRRMGHINGKSLDVLRKEPVNGVDYTGNVNDCCVCPLGKSAQQPHPKQVTYGVLRPFQHVSVDTLGPFTPTALGGFKYATKFVDQQTKWAEIVLMKDQACSVDSLALFKKGTVVPTGERIHCLRGDPGTEFT 421

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BLAST of mRNA_H-paniculata_contig13415.2133.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 2.360e-30
Identity = 56/134 (41.79%), Postives = 82/134 (61.19%), Query Frame = 0

Query:    9 LWHRRLGHLNCKSLDLPKKRNHNGVSFDGTVPDCDVCAVEKSHQLAHLKTADHKVKYPFQLVFTDMMGPITPEALGDFKCVSKISDEYTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEDT 142
            LWHRRL H +   ++   +    GV     +  C+ C ++KS Q  H KTA H    P Q V+TD++GPI+P A G F  VSK +DEY++    YL+++K + +   + F+  +VIP+GFR+ERLR+D GGE T
Sbjct:  470 LWHRRLAHCHKGIIEAAARIKETGVKLTDNLDPCETCKLQKSTQRKHPKTAKHTAVQPCQRVYTDLLGPISPPAKGGFNYVSKFTDEYSRMNVVYLIRTKDEAIDTLERFIDDIVIPNGFRLERLRSDCGGEYT 603

[Close]

BLAST of mRNA_H-paniculata_contig13415.2133.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 7.110e-30
Identity = 61/139 (43.88%), Postives = 80/139 (57.55%), Query Frame = 0

Query:    7 ATLWHRRLGHLNCKSLDLPKKRNHNGVSFDGTVPDCDVCAVEKSHQLAHLKTADHKVKYPFQLVFTDMMGPITPEAL---GDFKCVSKISDEYTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEDT 142
            A  WHRRLGHLN +SLD+ +K    GV +  ++  C VC + K  Q  H K +  ++  P QLV  D MGP+ P A    G F    KI+D+YTK  E YLL+ K DT  A  ++   V    G+RIE +R DKGGE+T
Sbjct:  418 ADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENT 556

[Close]

BLAST of mRNA_H-paniculata_contig13415.2133.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 8.510e-30
Identity = 61/139 (43.88%), Postives = 80/139 (57.55%), Query Frame = 0

Query:    7 ATLWHRRLGHLNCKSLDLPKKRNHNGVSFDGTVPDCDVCAVEKSHQLAHLKTADHKVKYPFQLVFTDMMGPITPEAL---GDFKCVSKISDEYTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEDT 142
            A  WHRRLGHLN +SLD+ +K    GV +  ++  C VC + K  Q  H K +  ++  P QLV  D MGP+ P A    G F    KI+D+YTK  E YLL+ K DT  A  ++   V    G+RIE +R DKGGE+T
Sbjct:   42 ADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENT 180

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig13415.2133.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig13415.2133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K1J1_9PHAE	4.090e-37	50.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KJN3_9PHAE	1.010e-33	48.53	Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5KJH6_9PHAE	1.030e-33	48.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J842_9PHAE	1.030e-33	48.53	Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5JBV6_9PHAE	1.650e-32	48.53	Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5KZ34_9PHAE	6.130e-32	43.88	Integrase catalytic domain-containing protein n=2 ...	[more]
A0A6H5KXM1_9PHAE	1.670e-30	46.32	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KY84_9PHAE	2.360e-30	41.79	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KT84_9PHAE	7.110e-30	43.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCM0_9PHAE	8.510e-30	43.88	Integrase catalytic domain-containing protein n=5 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 6..49 e-value: 4.1E-7 score: 29.8
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 57..140 e-value: 2.5E-6 score: 28.8
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 6..140
None	No IPR available	PANTHER	PTHR11439:SF250		coord: 6..140
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 62..140

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig13415	contig	H-paniculata_contig13415:6593..7018 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig13415.2133.1	mRNA_H-paniculata_contig13415.2133.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig13415 6593..7018 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig13415.2133.1 ID=prot_H-paniculata_contig13415.2133.1|Name=mRNA_H-paniculata_contig13415.2133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp
MQAAADATLWHRRLGHLNCKSLDLPKKRNHNGVSFDGTVPDCDVCAVEKS
HQLAHLKTADHKVKYPFQLVFTDMMGPITPEALGDFKCVSKISDEYTKWT
ETYLLKSKGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEDT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025724	GAG-pre-integrase_dom
IPR036397	RNaseH_sf
IPR039537	Retrotran_Ty1/copia-like
IPR012337	RNaseH-like_sf