mRNA_H-paniculata_contig13404.2127.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE) HSP 1 Score: 317 bits (813), Expect = 4.970e-91 Identity = 164/259 (63.32%), Postives = 200/259 (77.22%), Query Frame = 3 Query: 3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAIS 779 V+ FSSYG T DGR+KPE+VAPG+ ++SA SDGTD+H+CRL+ GTSMS PIVAGAAA+VRQYF D +FY DV R C+ G F C+ F+P +ATVKA+LINSANLMG S+QPD RGFGR+HLE GMPL+G+G+LALFVADA T+I++ + Y F V+A+AGLELRATL W+D + S QL +DLDL V SPSG V+ MWGS++ D NVNERVIV D +E+G WTV V S SL+TD QSYSLVV GAIS Sbjct: 683 VADFSSYGFTTDGRIKPEVVAPGDMVYSAASDGTDSHSCRLWAYQGTSMSCPIVAGAAAMVRQYFVDETFYTADVTARGFCSDG-FICEGFSPSAATVKALLINSANLMGESSQPDAYRGFGRIHLEQGMPLEGEGDLALFVADALDTSIAEDTVQEYLFDVDADAGLELRATLSWIDYPATSTSAMQLVNDLDLVVVSPSGTVYRMWGSDVTDNRNVNERVIVDADDVETGTWTVLVYSNSLVTDSQSYSLVVNGAIS 940
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: A0A6H5K365_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K365_9PHAE) HSP 1 Score: 303 bits (777), Expect = 4.220e-88 Identity = 158/259 (61.00%), Postives = 195/259 (75.29%), Query Frame = 3 Query: 3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAIS 779 V+ FSS+G T D R+KPE+VAPG+ ++SA SDGTDTH+CRL+ GTSMS PIVAGAAA++RQYF D +FY+ DV R C+ F C+ F+P +ATVKA+LINSANLMGGS++PDG RGFGRVHLEAGMPL+G+G L LFVADA T+I++ + Y F V+A+AGL+LRATL W+D + A S QL H+LDL V SP G + MWGS D NVNERVIV + +G WTV V + SL+TD QSYSLVV GAIS Sbjct: 408 VAEFSSWGFTTDDRIKPEVVAPGDSVYSAASDGTDTHSCRLWAYEGTSMSCPIVAGAAAMIRQYFMDETFYMADVTARGFCSD-VFICEGFSPSAATVKALLINSANLMGGSSEPDGFRGFGRVHLEAGMPLEGEGNLVLFVADALDTSIAEGTLDEYLFDVDADAGLDLRATLSWIDPPSTATSAVQLVHNLDLVVVSPDGTTYRMWGSETTDNRNVNERVIVDATDVVTGTWTVWVWANSLITDSQSYSLVVNGAIS 665
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: D8LU20_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU20_ECTSI) HSP 1 Score: 306 bits (783), Expect = 6.420e-87 Identity = 163/260 (62.69%), Postives = 194/260 (74.62%), Query Frame = 3 Query: 3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCA--GGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAI 776 V+FFSS GPT DGR+KP++VAPG+Q+ SA SDGTD H+CRL + GTS S P+VAGAAALVRQYF D SF+ DV R CA C FAP +ATVKAM+INSA+LMGGS++P+G+RGFGRVHLEAGMP+ G GE L V +A TI +++ V+ +AG ELRATL WLD T A+S QLQHDLDL V +PSGA +TMW S DTVNV ERVIVPV+ +ESGVW+V V +K LLTD QSYSLVVTGAI Sbjct: 717 VAFFSSQGPTLDGRIKPDVVAPGDQVASASSDGTDGHSCRLLANMGTSASCPLVAGAAALVRQYFKDPSFFAKDVTSRGGCAEHSSSSQCSEFAPSAATVKAMIINSAHLMGGSSEPNGLRGFGRVHLEAGMPMDGVGETGLLVVEA---TIGSDDEITELVTVDGDAGAELRATLAWLDPPTTALSAKQLQHDLDLHVIAPSGAKYTMWESGADDTVNVVERVIVPVESMESGVWSVVVSAKGLLTDEQSYSLVVTGAI 973
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: D8LNG6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG6_ECTSI) HSP 1 Score: 305 bits (780), Expect = 1.500e-86 Identity = 158/259 (61.00%), Postives = 195/259 (75.29%), Query Frame = 3 Query: 3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAIS 779 V+ FSS+G T D R+KPE+VAPG+ ++SA SDGTDTH+CRL+ GTSMS PIVAGAAA++RQYF D +FY DV R C+ G F C+ F+P +ATVKA+LINSANLMGGS++PDG RGFGRVHLEAGMPL+G+G+L LFVADA T+I+ + Y F V+A+AGL+LRATL W+D A S QL H+LDL V SP G + MWGS+ D NVNERVIV + +G WTV V + +L+TD QSYSLVV GAIS Sbjct: 647 VAEFSSWGFTTDDRIKPEVVAPGDSVYSAASDGTDTHSCRLWAYEGTSMSCPIVAGAAAMIRQYFVDETFYTADVTARGFCSDG-FICEGFSPSAATVKALLINSANLMGGSSEPDGFRGFGRVHLEAGMPLEGEGDLVLFVADALDTSIAGGTLEEYLFDVDADAGLDLRATLSWIDPPATATSAVQLVHNLDLVVVSPDGTTYRMWGSDTTDNRNVNERVIVDATDVVTGTWTVWVWANNLVTDSQSYSLVVNGAIS 904
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: D8LSW0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW0_ECTSI) HSP 1 Score: 301 bits (772), Expect = 4.070e-85 Identity = 161/260 (61.92%), Postives = 195/260 (75.00%), Query Frame = 3 Query: 3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCA--GGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAI 776 V+FFSS GPT DGR+KP++VAPG+Q+ SA SDGTD H+C+L S GTS S P+VAGAAALVRQYF D SF+ DV R CA C FAP +ATVKAM+INSA+LMGGS++P+GVRGFGRVHLEAGMP+ G GE L V +A+ +++ V+ +AG+ELRATL WLD T A+S QLQHDLDL V +PSGA +TMW S + DTVNV ERVIVPV+ +ESGVW+V V +K+LLTD Q YSLVVTGAI Sbjct: 758 VAFFSSQGPTLDGRIKPDVVAPGDQVASASSDGTDGHSCKLVASMGTSASCPLVAGAAALVRQYFKDPSFFAKDVVSRGGCAEHSSSCQCSEFAPSAATVKAMIINSAHLMGGSSEPNGVRGFGRVHLEAGMPMDGVGETGLSVVEAAIAD----GEITELVTVDGDAGVELRATLAWLDPPTTALSAKQLQHDLDLHVIAPSGAKYTMWESGVDDTVNVVERVIVPVESMESGVWSVVVSAKALLTDEQLYSLVVTGAI 1013
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: A0A2I6U1S5_SACJA (Subtilisin n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1S5_SACJA) HSP 1 Score: 299 bits (766), Expect = 8.770e-85 Identity = 156/259 (60.23%), Postives = 193/259 (74.52%), Query Frame = 3 Query: 3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWG-SNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAI 776 V+ FSSYGPTQDGR+KPE+VAPG+ ++SA SDG+D H+CRL SGTSM+ PIVAGA+A+VRQYF D SFY+ D R C C++F+P SATVKA+LINSANLMGGS++PDG RGFGR+HLE GMPL G+G LALFVAD+S T++ + S + F V+ANA L+ RATL W+D + S QL HDLDL V SPSGA MW S VD+ NVNERVI+ + +ESG +TV V + LLTD Q+YSLVV GA+ Sbjct: 640 VAVFSSYGPTQDGRIKPEVVAPGDAVYSARSDGSDVHSCRLSAKSGTSMACPIVAGASAMVRQYFMDESFYLADQAARGWCDDSGRQCESFSPSSATVKALLINSANLMGGSSEPDGFRGFGRIHLEMGMPLDGEGSLALFVADSSYTSLPELSSQDFVFDVDANANLDFRATLSWIDPPASSTSGVQLVHDLDLEVVSPSGATHIMWATSGEVDSRNVNERVIIAAENVESGTYTVRVSTNHLLTDSQNYSLVVNGAM 898
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: D8LNG4_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG4_ECTSI) HSP 1 Score: 292 bits (747), Expect = 1.550e-83 Identity = 152/263 (57.79%), Postives = 196/263 (74.52%), Query Frame = 3 Query: 3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGT-DTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLC---AGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAIS 779 V+ FSSYGPT D R+KPE++APG+ ++SA SDG+ DTH+CRL+ GTSMSTPIVAGA+A++RQYF + +F+ D+ R C AG C+AF+P SAT+KA++INSANLMG S++P+G RGFGR+HLEAGMPL G+G LALFV+D++ T+I + + Y F VNA AGL+LR TL WLD S QL HDLDL V SP+G +TMW S + D+ NVNERVIV D +E+G W+V + + +L TD QSYSLVV GAIS Sbjct: 399 VAVFSSYGPTSDSRIKPEVLAPGDAIYSAASDGSVDTHSCRLWAYVGTSMSTPIVAGASAMIRQYFMNETFFATDMTARGFCDEWAG----CEAFSPSSATLKALMINSANLMGESSEPNGSRGFGRIHLEAGMPLGGEGSLALFVSDSNYTSIPELTRQEYNFDVNATAGLDLRVTLSWLDPPATTFSAVQLVHDLDLVVISPNGTRYTMWASGVTDSSNVNERVIVDADDVETGTWSVWIWADNLTTDVQSYSLVVNGAIS 657
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: A0A2I6U1Q9_SACJA (Subtilisin n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1Q9_SACJA) HSP 1 Score: 288 bits (736), Expect = 6.650e-83 Identity = 153/259 (59.07%), Postives = 187/259 (72.20%), Query Frame = 3 Query: 3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWG-SNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAI 776 V+ FSSYGPTQDGR+KPE+VAPG+ +SA SDG D H+CRL GTSM+ PIVAGA+A+VRQYF D SFY+ D R C C++F+P SATVKA+LINSANLMGGS++PDG RGFGR+HLE GMPL G G L+LFVAD+S T++ + S + F V+A+A L+ RATL W+D + S QL HDLDL V SPSGA MW S VD+ NVNERVI+ +ESG +TV V + LLTD Q YSLVV GA+ Sbjct: 401 VAQFSSYGPTQDGRIKPEVVAPGDTTYSARSDGGDDHSCRLSAQFGTSMACPIVAGASAMVRQYFMDESFYLADQAARGWCDDSGRQCESFSPSSATVKALLINSANLMGGSSEPDGFRGFGRIHLEMGMPLDGNGSLSLFVADSSYTSLPELSSHDFVFDVDADANLDFRATLSWIDPPASSTSGVQLVHDLDLEVVSPSGATHIMWATSGEVDSRNVNERVIIAAADVESGTYTVRVSTNHLLTDSQGYSLVVNGAM 659
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: A0A6H5JQT4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT4_9PHAE) HSP 1 Score: 295 bits (754), Expect = 2.610e-82 Identity = 159/303 (52.48%), Postives = 211/303 (69.64%), Query Frame = 3 Query: 3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGT-DTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLC---AGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAIS-----NAVTG*TRITEE*VYRCVSTRPRSDTSLDSKDQST 884 V+ FSSYGPT D R+KPE++APG+ ++SA SDG+ D+H+CRL+ +GTSMSTPIVAGA+A++RQYF + +F+ D+ R C AG C+AF+P SAT+KA++INSANLMGGS++PDG RGFGR+HLEAGMPL+G+G LALFV+D++ T+I + + Y F VNA A L+LR TL WLD S QL HDLDL V SP+G +TMW S + D+ NVNERVIV +E+G W+V + + +L TD QSYSLVV GAIS A+ + + + T PR +T L + D T Sbjct: 709 VAVFSSYGPTSDSRIKPEVLAPGDAIYSAASDGSMDSHSCRLWAYAGTSMSTPIVAGASAMIRQYFMNETFFATDMTARGFCDEWAG----CEAFSPSSATLKALMINSANLMGGSSEPDGSRGFGRIHLEAGMPLRGEGSLALFVSDSNYTSIPERTRQEYNFDVNATARLDLRVTLSWLDPPATTFSAVQLVHDLDLVVISPNGTRYTMWASGVTDSANVNERVIVDAGDVETGTWSVWIWADNLTTDVQSYSLVVNGAISPGTGVGAIERSSSTSSTSSDGVLETPPRWETGLSTSDSDT 1007
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE) HSP 1 Score: 286 bits (733), Expect = 4.260e-79 Identity = 153/274 (55.84%), Postives = 194/274 (70.80%), Query Frame = 3 Query: 3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDML---------------ESGVWTVTVLSKSLL-TDRQSYSLVVTGAI 776 +++FSS+GPT D R+KPE+VAPG+ ++SA G +TCRL++ +GTSMSTPIVAGAAALVRQYF + +FY DV+ R C F C+ FAP +ATVKAMLINSANLMGGSA+PDG+RGFGRVHLEAGMPL G+G+ ALFVAD++ T+ ++ + Y+F V+A AG++LRATL W+D S QL HDLDL+V SP+G ++MW VD++N NERVIVP + G WTV V SK L + QSYSLVVTGAI Sbjct: 806 MAYFSSFGPTLDNRIKPEVVAPGDMIYSAAGSGDGNYTCRLWQYAGTSMSTPIVAGAAALVRQYFKNETFYAHDVEERGFC--DSFGCEPFAPSAATVKAMLINSANLMGGSAEPDGLRGFGRVHLEAGMPLAGEGDNALFVADSAVTSTAELTLTEYSFAVDAAAGIDLRATLSWIDPPATTFSSVQLVHDLDLSVYSPTGLRYSMWRDGTVDSLNNNERVIVPASNILDQTSSDATTAEDGESDGTWTVRVWSKRLAGNETQSYSLVVTGAI 1077 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13404.2127.1 >prot_H-paniculata_contig13404.2127.1 ID=prot_H-paniculata_contig13404.2127.1|Name=mRNA_H-paniculata_contig13404.2127.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=217bp MSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATVback to top mRNA from alignment at H-paniculata_contig13404:1753..6909+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13404.2127.1 ID=mRNA_H-paniculata_contig13404.2127.1|Name=mRNA_H-paniculata_contig13404.2127.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5157bp|location=Sequence derived from alignment at H-paniculata_contig13404:1753..6909+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13404:1753..6909+ >mRNA_H-paniculata_contig13404.2127.1 ID=mRNA_H-paniculata_contig13404.2127.1|Name=mRNA_H-paniculata_contig13404.2127.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1302bp|location=Sequence derived from alignment at H-paniculata_contig13404:1753..6909+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |