mRNA_H-paniculata_contig13404.2127.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13404.2127.1
Unique NamemRNA_H-paniculata_contig13404.2127.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 4.970e-91
Identity = 164/259 (63.32%), Postives = 200/259 (77.22%), Query Frame = 3
Query:    3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAIS 779
            V+ FSSYG T DGR+KPE+VAPG+ ++SA SDGTD+H+CRL+   GTSMS PIVAGAAA+VRQYF D +FY  DV  R  C+ G F C+ F+P +ATVKA+LINSANLMG S+QPD  RGFGR+HLE GMPL+G+G+LALFVADA  T+I++ +   Y F V+A+AGLELRATL W+D    + S  QL +DLDL V SPSG V+ MWGS++ D  NVNERVIV  D +E+G WTV V S SL+TD QSYSLVV GAIS
Sbjct:  683 VADFSSYGFTTDGRIKPEVVAPGDMVYSAASDGTDSHSCRLWAYQGTSMSCPIVAGAAAMVRQYFVDETFYTADVTARGFCSDG-FICEGFSPSAATVKALLINSANLMGESSQPDAYRGFGRIHLEQGMPLEGEGDLALFVADALDTSIAEDTVQEYLFDVDADAGLELRATLSWIDYPATSTSAMQLVNDLDLVVVSPSGTVYRMWGSDVTDNRNVNERVIVDADDVETGTWTVLVYSNSLVTDSQSYSLVVNGAIS 940          
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: A0A6H5K365_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K365_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 4.220e-88
Identity = 158/259 (61.00%), Postives = 195/259 (75.29%), Query Frame = 3
Query:    3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAIS 779
            V+ FSS+G T D R+KPE+VAPG+ ++SA SDGTDTH+CRL+   GTSMS PIVAGAAA++RQYF D +FY+ DV  R  C+   F C+ F+P +ATVKA+LINSANLMGGS++PDG RGFGRVHLEAGMPL+G+G L LFVADA  T+I++ +   Y F V+A+AGL+LRATL W+D  + A S  QL H+LDL V SP G  + MWGS   D  NVNERVIV    + +G WTV V + SL+TD QSYSLVV GAIS
Sbjct:  408 VAEFSSWGFTTDDRIKPEVVAPGDSVYSAASDGTDTHSCRLWAYEGTSMSCPIVAGAAAMIRQYFMDETFYMADVTARGFCSD-VFICEGFSPSAATVKALLINSANLMGGSSEPDGFRGFGRVHLEAGMPLEGEGNLVLFVADALDTSIAEGTLDEYLFDVDADAGLDLRATLSWIDPPSTATSAVQLVHNLDLVVVSPDGTTYRMWGSETTDNRNVNERVIVDATDVVTGTWTVWVWANSLITDSQSYSLVVNGAIS 665          
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: D8LU20_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU20_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 6.420e-87
Identity = 163/260 (62.69%), Postives = 194/260 (74.62%), Query Frame = 3
Query:    3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCA--GGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAI 776
            V+FFSS GPT DGR+KP++VAPG+Q+ SA SDGTD H+CRL  + GTS S P+VAGAAALVRQYF D SF+  DV  R  CA       C  FAP +ATVKAM+INSA+LMGGS++P+G+RGFGRVHLEAGMP+ G GE  L V +A   TI    +++    V+ +AG ELRATL WLD  T A+S  QLQHDLDL V +PSGA +TMW S   DTVNV ERVIVPV+ +ESGVW+V V +K LLTD QSYSLVVTGAI
Sbjct:  717 VAFFSSQGPTLDGRIKPDVVAPGDQVASASSDGTDGHSCRLLANMGTSASCPLVAGAAALVRQYFKDPSFFAKDVTSRGGCAEHSSSSQCSEFAPSAATVKAMIINSAHLMGGSSEPNGLRGFGRVHLEAGMPMDGVGETGLLVVEA---TIGSDDEITELVTVDGDAGAELRATLAWLDPPTTALSAKQLQHDLDLHVIAPSGAKYTMWESGADDTVNVVERVIVPVESMESGVWSVVVSAKGLLTDEQSYSLVVTGAI 973          
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: D8LNG6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG6_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 1.500e-86
Identity = 158/259 (61.00%), Postives = 195/259 (75.29%), Query Frame = 3
Query:    3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAIS 779
            V+ FSS+G T D R+KPE+VAPG+ ++SA SDGTDTH+CRL+   GTSMS PIVAGAAA++RQYF D +FY  DV  R  C+ G F C+ F+P +ATVKA+LINSANLMGGS++PDG RGFGRVHLEAGMPL+G+G+L LFVADA  T+I+  +   Y F V+A+AGL+LRATL W+D    A S  QL H+LDL V SP G  + MWGS+  D  NVNERVIV    + +G WTV V + +L+TD QSYSLVV GAIS
Sbjct:  647 VAEFSSWGFTTDDRIKPEVVAPGDSVYSAASDGTDTHSCRLWAYEGTSMSCPIVAGAAAMIRQYFVDETFYTADVTARGFCSDG-FICEGFSPSAATVKALLINSANLMGGSSEPDGFRGFGRVHLEAGMPLEGEGDLVLFVADALDTSIAGGTLEEYLFDVDADAGLDLRATLSWIDPPATATSAVQLVHNLDLVVVSPDGTTYRMWGSDTTDNRNVNERVIVDATDVVTGTWTVWVWANNLVTDSQSYSLVVNGAIS 904          
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: D8LSW0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW0_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 4.070e-85
Identity = 161/260 (61.92%), Postives = 195/260 (75.00%), Query Frame = 3
Query:    3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCA--GGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAI 776
            V+FFSS GPT DGR+KP++VAPG+Q+ SA SDGTD H+C+L  S GTS S P+VAGAAALVRQYF D SF+  DV  R  CA       C  FAP +ATVKAM+INSA+LMGGS++P+GVRGFGRVHLEAGMP+ G GE  L V +A+        +++    V+ +AG+ELRATL WLD  T A+S  QLQHDLDL V +PSGA +TMW S + DTVNV ERVIVPV+ +ESGVW+V V +K+LLTD Q YSLVVTGAI
Sbjct:  758 VAFFSSQGPTLDGRIKPDVVAPGDQVASASSDGTDGHSCKLVASMGTSASCPLVAGAAALVRQYFKDPSFFAKDVVSRGGCAEHSSSCQCSEFAPSAATVKAMIINSAHLMGGSSEPNGVRGFGRVHLEAGMPMDGVGETGLSVVEAAIAD----GEITELVTVDGDAGVELRATLAWLDPPTTALSAKQLQHDLDLHVIAPSGAKYTMWESGVDDTVNVVERVIVPVESMESGVWSVVVSAKALLTDEQLYSLVVTGAI 1013          
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: A0A2I6U1S5_SACJA (Subtilisin n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1S5_SACJA)

HSP 1 Score: 299 bits (766), Expect = 8.770e-85
Identity = 156/259 (60.23%), Postives = 193/259 (74.52%), Query Frame = 3
Query:    3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWG-SNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAI 776
            V+ FSSYGPTQDGR+KPE+VAPG+ ++SA SDG+D H+CRL   SGTSM+ PIVAGA+A+VRQYF D SFY+ D   R  C      C++F+P SATVKA+LINSANLMGGS++PDG RGFGR+HLE GMPL G+G LALFVAD+S T++ + S   + F V+ANA L+ RATL W+D    + S  QL HDLDL V SPSGA   MW  S  VD+ NVNERVI+  + +ESG +TV V +  LLTD Q+YSLVV GA+
Sbjct:  640 VAVFSSYGPTQDGRIKPEVVAPGDAVYSARSDGSDVHSCRLSAKSGTSMACPIVAGASAMVRQYFMDESFYLADQAARGWCDDSGRQCESFSPSSATVKALLINSANLMGGSSEPDGFRGFGRIHLEMGMPLDGEGSLALFVADSSYTSLPELSSQDFVFDVDANANLDFRATLSWIDPPASSTSGVQLVHDLDLEVVSPSGATHIMWATSGEVDSRNVNERVIIAAENVESGTYTVRVSTNHLLTDSQNYSLVVNGAM 898          
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: D8LNG4_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG4_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 1.550e-83
Identity = 152/263 (57.79%), Postives = 196/263 (74.52%), Query Frame = 3
Query:    3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGT-DTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLC---AGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAIS 779
            V+ FSSYGPT D R+KPE++APG+ ++SA SDG+ DTH+CRL+   GTSMSTPIVAGA+A++RQYF + +F+  D+  R  C   AG    C+AF+P SAT+KA++INSANLMG S++P+G RGFGR+HLEAGMPL G+G LALFV+D++ T+I + +   Y F VNA AGL+LR TL WLD      S  QL HDLDL V SP+G  +TMW S + D+ NVNERVIV  D +E+G W+V + + +L TD QSYSLVV GAIS
Sbjct:  399 VAVFSSYGPTSDSRIKPEVLAPGDAIYSAASDGSVDTHSCRLWAYVGTSMSTPIVAGASAMIRQYFMNETFFATDMTARGFCDEWAG----CEAFSPSSATLKALMINSANLMGESSEPNGSRGFGRIHLEAGMPLGGEGSLALFVSDSNYTSIPELTRQEYNFDVNATAGLDLRVTLSWLDPPATTFSAVQLVHDLDLVVISPNGTRYTMWASGVTDSSNVNERVIVDADDVETGTWSVWIWADNLTTDVQSYSLVVNGAIS 657          
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: A0A2I6U1Q9_SACJA (Subtilisin n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1Q9_SACJA)

HSP 1 Score: 288 bits (736), Expect = 6.650e-83
Identity = 153/259 (59.07%), Postives = 187/259 (72.20%), Query Frame = 3
Query:    3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWG-SNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAI 776
            V+ FSSYGPTQDGR+KPE+VAPG+  +SA SDG D H+CRL    GTSM+ PIVAGA+A+VRQYF D SFY+ D   R  C      C++F+P SATVKA+LINSANLMGGS++PDG RGFGR+HLE GMPL G G L+LFVAD+S T++ + S   + F V+A+A L+ RATL W+D    + S  QL HDLDL V SPSGA   MW  S  VD+ NVNERVI+    +ESG +TV V +  LLTD Q YSLVV GA+
Sbjct:  401 VAQFSSYGPTQDGRIKPEVVAPGDTTYSARSDGGDDHSCRLSAQFGTSMACPIVAGASAMVRQYFMDESFYLADQAARGWCDDSGRQCESFSPSSATVKALLINSANLMGGSSEPDGFRGFGRIHLEMGMPLDGNGSLSLFVADSSYTSLPELSSHDFVFDVDADANLDFRATLSWIDPPASSTSGVQLVHDLDLEVVSPSGATHIMWATSGEVDSRNVNERVIIAAADVESGTYTVRVSTNHLLTDSQGYSLVVNGAM 659          
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: A0A6H5JQT4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT4_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 2.610e-82
Identity = 159/303 (52.48%), Postives = 211/303 (69.64%), Query Frame = 3
Query:    3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGT-DTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLC---AGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQSYSLVVTGAIS-----NAVTG*TRITEE*VYRCVSTRPRSDTSLDSKDQST 884
            V+ FSSYGPT D R+KPE++APG+ ++SA SDG+ D+H+CRL+  +GTSMSTPIVAGA+A++RQYF + +F+  D+  R  C   AG    C+AF+P SAT+KA++INSANLMGGS++PDG RGFGR+HLEAGMPL+G+G LALFV+D++ T+I + +   Y F VNA A L+LR TL WLD      S  QL HDLDL V SP+G  +TMW S + D+ NVNERVIV    +E+G W+V + + +L TD QSYSLVV GAIS      A+   +  +       + T PR +T L + D  T
Sbjct:  709 VAVFSSYGPTSDSRIKPEVLAPGDAIYSAASDGSMDSHSCRLWAYAGTSMSTPIVAGASAMIRQYFMNETFFATDMTARGFCDEWAG----CEAFSPSSATLKALMINSANLMGGSSEPDGSRGFGRIHLEAGMPLRGEGSLALFVSDSNYTSIPERTRQEYNFDVNATARLDLRVTLSWLDPPATTFSAVQLVHDLDLVVISPNGTRYTMWASGVTDSANVNERVIVDAGDVETGTWSVWIWADNLTTDVQSYSLVVNGAISPGTGVGAIERSSSTSSTSSDGVLETPPRWETGLSTSDSDT 1007          
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 4.260e-79
Identity = 153/274 (55.84%), Postives = 194/274 (70.80%), Query Frame = 3
Query:    3 VSFFSSYGPTQDGRVKPEIVAPGEQLFSAYSDGTDTHTCRLFESSGTSMSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATVKAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTTTISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVSSPSGAVFTMWGSNIVDTVNVNERVIVPVDML---------------ESGVWTVTVLSKSLL-TDRQSYSLVVTGAI 776
            +++FSS+GPT D R+KPE+VAPG+ ++SA   G   +TCRL++ +GTSMSTPIVAGAAALVRQYF + +FY  DV+ R  C    F C+ FAP +ATVKAMLINSANLMGGSA+PDG+RGFGRVHLEAGMPL G+G+ ALFVAD++ T+ ++ +   Y+F V+A AG++LRATL W+D      S  QL HDLDL+V SP+G  ++MW    VD++N NERVIVP   +                 G WTV V SK L   + QSYSLVVTGAI
Sbjct:  806 MAYFSSFGPTLDNRIKPEVVAPGDMIYSAAGSGDGNYTCRLWQYAGTSMSTPIVAGAAALVRQYFKNETFYAHDVEERGFC--DSFGCEPFAPSAATVKAMLINSANLMGGSAEPDGLRGFGRVHLEAGMPLAGEGDNALFVADSAVTSTAELTLTEYSFAVDAAAGIDLRATLSWIDPPATTFSSVQLVHDLDLSVYSPTGLRYSMWRDGTVDSLNNNERVIVPASNILDQTSSDATTAEDGESDGTWTVRVWSKRLAGNETQSYSLVVTGAI 1077          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13404.2127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K229_9PHAE4.970e-9163.32Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A... [more]
A0A6H5K365_9PHAE4.220e-8861.00Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D8LU20_ECTSI6.420e-8762.69Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D8LNG6_ECTSI1.500e-8661.00Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D8LSW0_ECTSI4.070e-8561.92Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A2I6U1S5_SACJA8.770e-8560.23Subtilisin n=1 Tax=Saccharina japonica TaxID=88149... [more]
D8LNG4_ECTSI1.550e-8357.79Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A2I6U1Q9_SACJA6.650e-8359.07Subtilisin n=1 Tax=Saccharina japonica TaxID=88149... [more]
A0A6H5JQT4_9PHAE2.610e-8252.48Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
A0A6H5JKA8_9PHAE4.260e-7955.84Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13404contigH-paniculata_contig13404:1753..6909 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score249.2
Seed ortholog evalue1.7e-63
Seed eggNOG ortholog2880.D8LNG5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.tripeptidyl-peptidase activity
EggNOG OGsCOG1404@1,KOG1114@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size2428
Cds size651
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929062.3696012-UTR-H-paniculata_contig13404:1752..18291622929062.3696012-UTR-H-paniculata_contig13404:1752..1829Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13404 1753..1829 +
1691480717.0756917-UTR-H-paniculata_contig13404:1752..18291691480717.0756917-UTR-H-paniculata_contig13404:1752..1829Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13404 1753..1829 +
1622929062.3822894-UTR-H-paniculata_contig13404:2470..25391622929062.3822894-UTR-H-paniculata_contig13404:2470..2539Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13404 2471..2539 +
1691480717.0845313-UTR-H-paniculata_contig13404:2470..25391691480717.0845313-UTR-H-paniculata_contig13404:2470..2539Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13404 2471..2539 +
1622929062.4462144-UTR-H-paniculata_contig13404:5278..69091622929062.4462144-UTR-H-paniculata_contig13404:5278..6909Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13404 5279..6909 +
1691480717.1312275-UTR-H-paniculata_contig13404:5278..69091691480717.1312275-UTR-H-paniculata_contig13404:5278..6909Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13404 5279..6909 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929062.393687-CDS-H-paniculata_contig13404:2539..25751622929062.393687-CDS-H-paniculata_contig13404:2539..2575Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13404 2540..2575 +
1691480717.0978477-CDS-H-paniculata_contig13404:2539..25751691480717.0978477-CDS-H-paniculata_contig13404:2539..2575Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13404 2540..2575 +
1622929062.4048939-CDS-H-paniculata_contig13404:3015..31321622929062.4048939-CDS-H-paniculata_contig13404:3015..3132Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13404 3016..3132 +
1691480717.1052887-CDS-H-paniculata_contig13404:3015..31321691480717.1052887-CDS-H-paniculata_contig13404:3015..3132Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13404 3016..3132 +
1622929062.4173539-CDS-H-paniculata_contig13404:3313..34991622929062.4173539-CDS-H-paniculata_contig13404:3313..3499Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13404 3314..3499 +
1691480717.1127765-CDS-H-paniculata_contig13404:3313..34991691480717.1127765-CDS-H-paniculata_contig13404:3313..3499Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13404 3314..3499 +
1622929062.430616-CDS-H-paniculata_contig13404:4966..52781622929062.430616-CDS-H-paniculata_contig13404:4966..5278Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13404 4967..5278 +
1691480717.12278-CDS-H-paniculata_contig13404:4966..52781691480717.12278-CDS-H-paniculata_contig13404:4966..5278Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13404 4967..5278 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13404.2127.1prot_H-paniculata_contig13404.2127.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13404 2540..5278 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13404.2127.1

>prot_H-paniculata_contig13404.2127.1 ID=prot_H-paniculata_contig13404.2127.1|Name=mRNA_H-paniculata_contig13404.2127.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=217bp
MSTPIVAGAAALVRQYFTDSSFYVDDVKRRRLCAGGQFACDAFAPYSATV
KAMLINSANLMGGSAQPDGVRGFGRVHLEAGMPLQGKGELALFVADASTT
TISQSSDVSYTFQVNANAGLELRATLCWLDSATLAMSKNQLQHDLDLTVS
SPSGAVFTMWGSNIVDTVNVNERVIVPVDMLESGVWTVTVLSKSLLTDRQ
SYSLVVTGAISNAVTG*
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mRNA from alignment at H-paniculata_contig13404:1753..6909+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13404.2127.1 ID=mRNA_H-paniculata_contig13404.2127.1|Name=mRNA_H-paniculata_contig13404.2127.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5157bp|location=Sequence derived from alignment at H-paniculata_contig13404:1753..6909+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGTGTCGTTTTTCAGCTCTTACGGACCCACCCAAGACGGGCGCGTCAAA CCAGAAATTGTGGCTCCAGGCGAGCAGGTACTCTCAATAGTGCCATGCGA CAATAATCCAGCCAAGCATCGTAGGGCTCCTGTTCGTAGGCAGGCAGGGT CAAGTTGGAGTAAGGTTTACGGGGCCTTGTATGTCGCTGGTTGGGGCGAG GTTGGGTCATACCTGAGCGGTTGGGGCATCGTCGGGTGTTGTGTTAGAGC TAACCGGTTCATGATGGTATTCCTGACCTGTACATAATTCAACCAAACAT GGACACCGATAAATAAGTCCCGTAACGAAGATGAGACACGTCCTCACACT CTCCGAGGTGCCTCATAGTTGGCGTTATACCGCTTGCCAAAAGTGGAGTC GCACTATCTCTCTTAGTTCCGTGCAAATGAGTGATGCATTTTCAAAACAA AATCACAATATCAAGATGTGAGCTACCGCCAGTTGCTGGTATTAGGCTAA AATGAATGTTGAACTCAGCTAGTGGCCCTTTCAGGGACGTGCAAACCACC TCTATTGTGATATCTTGAGCGGATTGCCTCTAGGCATGCGTTCAATATGC CAAGTGCGCAACGAGAGTATACCACATTGAAATTTTATCATCAAGTGATA ACCTTGGCTTCGTTTTTCCAAGATTGCTCGTCGCTTTTCGTCTTACGTGT GTGTCATCGCCTCGTCAGCTTTTTTCCGCATACAGCGATGGCACTGATAC CCACACGTGCAGACTGTTTGAGAGCTCTGGTACTTCCATGTCCACTCCGA TCGTAGCTGGGGCAGCCGCTCTGGTGAGAAGACAGTACTTTGGGCTGTGT GGTTCACAGTCATATTTCAATGCAGTATCTAGGAAAATCTACTATGTAGT ACATTCAGCACAGTCAGGTGTTTTGTTCAGCTGAAGATGCAACACACCCT GGGATTCACCGTGGAGCCTCCTTGCAATTATTGACGCGAGGATATGTTGG ATCTAAAATCATGTTTTGCTTTTGTTGACGCTTAGGTCAACACCAAGTAT CCCCCTAGAGGGGAAGGGAAACTATGCCCTCCCTGCCCCCACGCCCGATG CCTACGGTTGCTACACGACGAATTCGAAGGCGCTTCTATTGTTTTCACCG CACAAACTTTGCTACCTCCTAATTCGTTGGAGGCCAACGAAATCTAGCTA CCATGCGCGTATTCATCCCCACCTCCGACCTTTTTGACGACTGACTGTGG TGGGTCAAAACAGGTTCGCCAGTACTTTACTGATTCGTCCTTCTACGTCG ACGACGTGAAGAGGAGAAGACTATGTGCAGGGGGGCAGTTCGCGTGTGAC GCTTTCGCACCGTACTCTGCTACAGTCAAGGTAAGATTGCTTGTACGATT GTAGCTGGAAACACCACGAGGACGTAGTGCCCCTGATGATATATACACAA AACAAAGGTTGCTGATGTATTGTTCGAAGAGTGGGGAGTCCTGATCTCTG TTCACATAGTGAAAATGCTCTGATGCGCGTTCCGGCATGTGTGCATCGTT TGGCTACCTAGGCCATGCTGATCAACAGCGCGAACCTCATGGGCGGTAGC GCGCAACCGGATGGCGTTCGAGGATTCGGCCGTGTACATCTGGAAGCGGG CATGCCTCTCCAAGGTAAAGGGGAACTCGCCCTGTTCGTAGCCGACGCGT CTACCACGACCATCTCCCAGTCGTCGGATGTCTCCTACACATTCCAGGTG GGCGAATTTGTGTTCAAGTAGAGCTAGTCGGGATCAGATGAAACTTGCGG GTGTGCAGAGAGATGGCCGTTTATCTTTCGAGAGATCAAGTGGGCCACCG TTGAGATATGATAAGTTGGTGGGCTCGTTCTCCACAACATGGTCGTGGAC GGCATACACCCTCATGATTGGGAACATGTACGTTGCGGCATGTAGATACA TGGATGTCATTATCCGCAAATCAGCGCAGGCAGGCGAACCAACGGGTTTC ATACAAAAACCCTAGTGAAGTTACCTTCAGAGGTTGGAGCGTAATGATCG CCACCCTTCACCCCACGAGCTCACCGCCATGAAAAGTCTTTCAACGTAAT CGGCGTCGGTGGTCAAATGCTACAGTCGGGCTGCCATATTTCCGAAAAGA GTGAACCAAACGAGGTCAGATATTGAAAGTCCAAATGAGATCTCCACGCC AGCGCATAAAATGTAGTGAAAAAAGAGTTGTTAAGCCGACCGTCCGTACG TCTAGCCTTATTTTTGTCCTTGATCACATTAACGTGTAAGGACTTGGACG TAGTGCGTTGTTTTGTGAGCAGCTCGTGAAGGGGATGACGTCTGATTGAG AAGATATAACTCAAGTATGCCGTCTGCTCCAGCATAGCTTCTTAGTATGC GGACAAACTCCATGCTTGAGTGCGACATCATCCTTTGTCTTGATTCAGAG TTCTGCATTTTGACGGCTACCTGACGCCTGCCTGGTTGCGCTCCACCAAC GGACGCTACGCCCGGGTTTGGGAAATCGGGATAAGGTTAGCGTTGGGAAC CGGTTTGGGTCTTCGCCCTAATCGAGGCATCACGCAGCCGACATTCCTCC ACCAAGCAAGCTGCAACTTTGTGTGTTGATATTCGTCAACTAGCTGTTGG CGAGCTCGCCTCGTTTGCTTGTTGATATTTGGCGGCACGACAGTGATTAT ATTATTGGTGATGAGAGGATCATGACTTTGTTCCGAAAGCGCGTGCTCCG AAAGTGAAATTAATCTGGTAATCGTGGTGGTTCAAGTAGTAGAAGCCGGC GGTCATCTGCTTATACGTTGTGCACTTCAGCTTTTACTGTTAAAGTTGGC CTCAAACGAGTGTCTCGAAGTTCTATTCCCGCTGGCATTAGGCAATGTTC GACATACATGGACCAATATTCCACCCCGCTTGGATGTGGAAAATTTGCCT CAGATTATTGTTTGTTGTTTGTGGTGATGTTGGTATGAACTATCCTGAGC AAGTCCAGGTTGCCGTCTTCATGAGATCAAAGGGCAGCATTACGCGCATG ATTACGTTATTAATGAGCTCACTTTCCCGGCCTGGACAACGATCAGGTGA CGTGGTCACCTCACATGCCGTATTGCTGTACCTTTCAGGGAGAGGAAGAT GTATGGTGCACGATGTCGAGCAACCCGTCTGCTCTCGCATACTGTATGAA CTGAACAATTACAGGTGAACGCAAATGCTGGTCTGGAGCTGCGCGCCACC CTTTGCTGGCTAGACTCCGCCACTTTGGCCATGTCTAAGAATCAGCTACA GCATGATCTCGACCTCACCGTTTCATCTCCTTCCGGTGCCGTGTTCACAA TGTGGGGTTCTAACATCGTCGACACTGTCAACGTGAACGAGCGCGTCATT GTGCCCGTCGATATGCTGGAGAGCGGTGTGTGGACCGTGACCGTCTTGTC TAAATCTCTACTGACAGACCGTCAAAGCTACTCGTTGGTGGTGACGGGAG CCATATCCAATGCGGTCACAGGATAAACGAGAATCACTGAAGAATGAGTA TATCGCTGTGTGTCAACTCGGCCACGATCCGACACAAGCCTGGACTCCAA GGACCAGAGCACGATGACGTTAATATGGCAATAAAACCATGTTTAGGTGG TTGGTTGTTTGTGCTGGACGTTTTGTATTTTGTGGATACCTTAGATTCTT TGCATGGTGGTTGAAGCCTCGTTATCTATTTTATTCAGAACTTGACAGGA CGGTGGACTACGGGCGAGAAGAGTACGTTGTAACTCCTTTTTTCAGTAGA AGCCAGGATAGAGCTATAATTTGTTTAAGTGATATTACAGCGTGGTGCGT GTGAATCGCAACATCCAAATCTGTATGTTGTCGAGGTGTCAACATAATAC AGAGGCGAACGTTGAACACTACCGGCGGGAGGGGGGAGGTCAGTCAATCC CCTCCCCCCAGCATCTCTGTGCAGCAGTCTATTGTTCGCCTCCATCGTCG AGCTTTATCTAGTAGGATTGTTCGACCTCTGTACTGTATGGATACCACCA ATAAGTCTAGGATAACGTTCAGTTCTAGAAGCAAATCATGTAGATATTGA TGGCACTCTCCAACCCATAAATGCGTGTATCTTTGCATACAACGAGAAGT TCGGAACACAGACTGACGTATGTATCCATGCGCGTGAAATAAAAGGCACC ATCCTAGAGTACTTGTATGTGGAACGGGTATAAATGGATATCGTTGGGTT CTTGGTCTTGTTTTTTTCTCTTGTAACTACATGGAGAGCGATGTGGGGAG CATGTACATTTTCCTCTTTTCGTTAGTTACGTATCTCGATAGCTAGCTAT TGCGGATGTGTCTTCTTCCTATTGCCTTGCGATACACTCGGCTGAGAATT ACCTTTAGCTTGCTGGGGTGGCACGGGTAGACAGATGCCAACTGAAACGA CTTGTTAAGTGCCTTGAGATTCCAATCATTGTGGCACTAAATTTTCTTGA TTGGCGGAGCCATAATGTTGCTTTCGCGGGACGTTGTGACACAACTGTAA CAAAGTTGCCGGTTAACAGAATGGGTCAAAACCCAAAAGATGTAGCTACC ACGAACATGAGCGGTGGTTAAGACCGAGTGAACTCCTGAAGTAGTCATCT TCAATAGAATAGTAAATTACGACTGAGTAGAATGAATGGAAATGATGAAA GGGGGCCTCACACGACGGTGCTTTCTAAACGTAGACATCTTCTGAGTCCG AAGGAAGCTACGACCCCAGCTAGTATCCCCAGAATGAAGCCTTAAGGCGT GACTACATTCAGATAGCCACAAACAAATCTTGCAGTGTGTAGGTAGCCGT CCGTACCTGTTTATTGGACACATAAGTTCTGTTTGAATTTGTGTCGAAAG TGCTGATCTAAGAACCGCTAAATGCCTTCGTGTGTACCGCTGCGGTATAG TGTGGGTTAGTTGAACCCAAAATTAGCGCTTCTCAAGCAGCTAACCCGAC GTTGAACTTTGCCTATTCTATCGTTGCTACCTCCTGCGTGCAATAACTAG CCGGTAAAGCGTTTCACAAGTAAAGGAATATAGGAAATGCAGACACTCAG TAATCTTCCGAAGAGTGGAAGCAGCGGAAAGGGTTTTGCCTTAGCCTTCC GGGGGTT
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Coding sequence (CDS) from alignment at H-paniculata_contig13404:1753..6909+

>mRNA_H-paniculata_contig13404.2127.1 ID=mRNA_H-paniculata_contig13404.2127.1|Name=mRNA_H-paniculata_contig13404.2127.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1302bp|location=Sequence derived from alignment at H-paniculata_contig13404:1753..6909+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCCACTCCGATCGTAGCTGGGGCAGCCGCTCTGATGTCCACTCCGAT
CGTAGCTGGGGCAGCCGCTCTGGTTCGCCAGTACTTTACTGATTCGTCCT
TCTACGTCGACGACGTGAAGAGGAGAAGACTATGTGCAGGGGGGCAGTTC
GCGTGTGACGCTTTCGCACCGTACTCTGCTACAGTCAAGGTTCGCCAGTA
CTTTACTGATTCGTCCTTCTACGTCGACGACGTGAAGAGGAGAAGACTAT
GTGCAGGGGGGCAGTTCGCGTGTGACGCTTTCGCACCGTACTCTGCTACA
GTCAAGGCCATGCTGATCAACAGCGCGAACCTCATGGGCGGTAGCGCGCA
ACCGGATGGCGTTCGAGGATTCGGCCGTGTACATCTGGAAGCGGGCATGC
CTCTCCAAGGTAAAGGGGAACTCGCCCTGTTCGTAGCCGACGCGTCTACC
ACGACCATCTCCCAGTCGTCGGATGTCTCCTACACATTCCAGGCCATGCT
GATCAACAGCGCGAACCTCATGGGCGGTAGCGCGCAACCGGATGGCGTTC
GAGGATTCGGCCGTGTACATCTGGAAGCGGGCATGCCTCTCCAAGGTAAA
GGGGAACTCGCCCTGTTCGTAGCCGACGCGTCTACCACGACCATCTCCCA
GTCGTCGGATGTCTCCTACACATTCCAGGTGAACGCAAATGCTGGTCTGG
AGCTGCGCGCCACCCTTTGCTGGCTAGACTCCGCCACTTTGGCCATGTCT
AAGAATCAGCTACAGCATGATCTCGACCTCACCGTTTCATCTCCTTCCGG
TGCCGTGTTCACAATGTGGGGTTCTAACATCGTCGACACTGTCAACGTGA
ACGAGCGCGTCATTGTGCCCGTCGATATGCTGGAGAGCGGTGTGTGGACC
GTGACCGTCTTGTCTAAATCTCTACTGACAGACCGTCAAAGCTACTCGTT
GGTGGTGACGGGAGCCATATCCAATGCGGTCACAGGATAAGTGAACGCAA
ATGCTGGTCTGGAGCTGCGCGCCACCCTTTGCTGGCTAGACTCCGCCACT
TTGGCCATGTCTAAGAATCAGCTACAGCATGATCTCGACCTCACCGTTTC
ATCTCCTTCCGGTGCCGTGTTCACAATGTGGGGTTCTAACATCGTCGACA
CTGTCAACGTGAACGAGCGCGTCATTGTGCCCGTCGATATGCTGGAGAGC
GGTGTGTGGACCGTGACCGTCTTGTCTAAATCTCTACTGACAGACCGTCA
AAGCTACTCGTTGGTGGTGACGGGAGCCATATCCAATGCGGTCACAGGAT
AA
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