mRNA_H-paniculata_contig134.2125.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig134.2125.1 vs. uniprot
Match: D8LCC9_ECTSI (DUF547 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC9_ECTSI) HSP 1 Score: 402 bits (1034), Expect = 3.130e-136 Identity = 198/304 (65.13%), Postives = 239/304 (78.62%), Query Frame = 1
Query: 58 SMLTRLQFLGVLTALAAEISVNSCTSRQGKAPLVMADRAAVTGPDYDAWGKVLQAHIKPTTLRGIAVNAVDYDGIRSDPNFDIFVQSLETAPTTG-GKAEEYALWINSYNALAIKTVIDNPCKKQLLGMKKTKIASIKDVGTVLHPVWKRPAGVVGGETLSLDDIENVKLRTPEGYPADPLLHACIVCASASCPDVALTVYKPETLEDDMAANMRDFLANKKKGLALDKGKGVITLSKVFQWFEGDFM-KAGHASVLDALMPFMPEDVCDYVRQNKESLRVAHFEYDWGLNGPSPGAPGKGGSC 963
+++TR F+G + ALAA +++ ++ K P A+ A + PDY AW V++AH+K + +RGI +N VDY G+R DPNF+ FV+SL+ APT+G GK EYALWIN+YNALAIK V DNPCKK+L K+ I SIKD+G+V+ PVWK+PAGVVGGETL+LDD+ENVKLR P+ YPADPLLHACIVCAS SCPDVALT YKPETL+ DM ANMR FL N KKGL+LDK KGVI LSK+FQWFEGDF K G SVLDAL+P+MPEDV YV +NK SL+V HFEYDWG+NG SPGAPGKGG C
Sbjct: 3 ALITRAHFVGRVAALAAAGALSVTSTSSPKHPC--AEMAGSSAPDYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGKDAEYALWINTYNALAIKMVTDNPCKKRLFRTKR--ITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLTNPKKGLSLDKAKGVIKLSKIFQWFEGDFTTKIGKDSVLDALLPYMPEDVRTYVSENKGSLKVDHFEYDWGVNGSSPGAPGKGGKC 302
BLAST of mRNA_H-paniculata_contig134.2125.1 vs. uniprot
Match: A0A7S1CNX3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNX3_9STRA) HSP 1 Score: 196 bits (497), Expect = 7.850e-56 Identity = 109/260 (41.92%), Postives = 149/260 (57.31%), Query Frame = 1
Query: 163 ADRAAVTGP--DYDAWGKVLQAHIKPTTLRGIAVNAVDYDGIRSDPNFDIFVQSLETAPTTGGKAEEYALWINSYNALAIKTVIDNPCKKQLLGMKKTKIASIKDVGTVLHPVWKRPAGVVGGETLSLDDIENVKLRTPEGYPADPLLHACIVCASASCPDVALTVYKPETLEDDMAANMRDFLANKKKGLALDKGKGVITLSKVFQWFEGDFMKAGHASVLDALMPFMPEDVCDYVRQNKESLRVAHFEYDWGLNGPSP 936
A A+V+GP DY W + +I L I + VDY G+ +D FD V SL TA T K E YAL++N+YN LA+ T+I N C + + G I+SI+D+G VW RPAGVV G SL IE+ LR P+ Y D LHACIVCAS SCPDV + + P ++ M A + F+AN KG ALD+G G I LS +F W+ DF+ VL + +P ++R + ++ V++F+YDW +NGP P
Sbjct: 17 ATAASVSGPGFDYAGWTALTTEYIHEGELANITEHVVDYKGLAADARFDAVVASLATAATPTTKNETYALFMNAYNVLAVNTIIKNACVRPV-GGGCHPISSIRDIGNASVSVWNRPAGVVAGRQFSLQQIEDF-LRDPKPYGEDARLHACIVCASISCPDVRIGAFTPADVDAQMDAAVAAFVANTGKGAALDEGAGAIQLSPIFLWYALDFI-VHEDGVLPFVAAHLPAAQGAWLRAHASAVSVSYFDYDWDVNGPVP 273
BLAST of mRNA_H-paniculata_contig134.2125.1 vs. uniprot
Match: A0A523NRH9_9BACT (DUF547 domain-containing protein n=2 Tax=Nitrospina sp. TaxID=2024844 RepID=A0A523NRH9_9BACT) HSP 1 Score: 182 bits (461), Expect = 1.310e-50 Identity = 94/253 (37.15%), Postives = 147/253 (58.10%), Query Frame = 1
Query: 172 AAVTGPDYDAWGKVLQAHIKPTTLRGIAVNAVDYDGIRSDPNFDIFVQSLETAPTTGGKA--EEYALWINSYNALAIKTVIDNPCKKQLLGMKKTKIASIKDVGTVLHPVWKRPAGVVGGETLSLDDIENVKLRTPEGYPADPLLHACIVCASASCPDVALTVYKPETLEDDMAANMRDFLANKKKGLALDKGKGVITLSKVFQWFEGDFMKAGHASVLDALMPFMPEDVCDYVRQNKESLRVAHFEYDWGLN 924
AA D+ W +L+ H++PTTL G+ +NA+DY +R+DP F V +L++ P K ++ A WIN YN +A+K V+D+ + IKD G++ VW++PAG VGG+ +SL+DIE+ LR + +P +H IVCAS SCPD+ Y+ ETL+ + + FL N KG+ LD + + LSK+F WFEGDF G VL+ + + P + +++ K L++++ +Y+W LN
Sbjct: 36 AAAQAFDFSGWDALLKKHVRPTTLEGVRLNALDYARVRTDPEFKKIVSALKSFPPARLKTRNQKLAFWINVYNIMAVKMVLDH-----------YPVKGIKDAGSLFQSVWEQPAGQVGGKKISLNDIEHKILRKMD----EPRMHVAIVCASVSCPDLRREAYRAETLDVQLTDQTQRFLQNWGKGMRLDSEENRLYLSKIFSWFEGDFETQG--GVLEFITTYAPASIQKDLKRGK--LKISYLDYNWNLN 269
BLAST of mRNA_H-paniculata_contig134.2125.1 vs. uniprot
Match: A0A0J6YZB7_9BACT (DUF547 domain-containing protein n=1 Tax=Candidatus Nitromaritima sp. SCGC AAA799-A02 TaxID=1628278 RepID=A0A0J6YZB7_9BACT) HSP 1 Score: 177 bits (449), Expect = 3.810e-49 Identity = 96/252 (38.10%), Postives = 143/252 (56.75%), Query Frame = 1
Query: 190 DYDAWGKVLQAHIKPTTLRGIAVNAVDYDGIRSDPNFDIFVQSLETAPTTGGKA--EEYALWINSYNALAIKTVIDN-PCKKQLLGMKKTKIASIKDVGTVLHPVWKRPAGVVGGETLSLDDIENVKLRTPEGYPADPLLHACIVCASASCPDVALTVYKPETLEDDMAANMRDFLANKKKGLALDKGKGVITLSKVFQWFEGDFMKAGHASVLDALMPFMPEDVCDYVRQNKESLRVAHFEYDWGLNGPSP 936
D+ W +L+ ++ P T+ GI +NAVDY +++DP F V L+ G K+ E+ A WIN YN A+K V+D+ P K SI+DVG++ VWKRPAG++GG +L +IE+ LR +P +HA IVCAS SCPD+ L + LE+ + M+ FL N KG+ +D G+G +TLS +F WFEGDF G VL + P++ + K +RV++ +Y+W +N +P
Sbjct: 16 DFTEWDILLKKYVSPRTIDGIRLNAVDYGKLKTDPGFSRLVGGLKKFSPAGLKSREEKLAFWINIYNVFAVKMVVDHYPLK------------SIRDVGSLFRSVWKRPAGIIGGREYTLHEIEHGILRKM----GEPRIHAAIVCASVSCPDLLLESFSAGKLEEQLDNQMKTFLGNPGKGMQVDAGRGRVTLSSIFDWFEGDFEPRG--GVLAFIKPYVSATARKVL--GKPGVRVSYMDYNWKVNESAP 247
BLAST of mRNA_H-paniculata_contig134.2125.1 vs. uniprot
Match: A0A3M1DNF8_9GAMM (DUF547 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DNF8_9GAMM) HSP 1 Score: 171 bits (433), Expect = 8.570e-47 Identity = 108/272 (39.71%), Postives = 147/272 (54.04%), Query Frame = 1
Query: 139 QGKAPLVMADRAAVTG-----PDYDAWGKVLQAHIKPTTLRGIAVNAVDYDGIRSDPNFDIFVQSLE--TAPTTGGKAEEYALWINSYNALAIKTVIDNPCKKQLLGMKKTKIASIKDVGTVLHPVWKRPAGVVGGETLSLDDIENVKLRTPEGYPADPLLHACIVCASASCPDVALTVYKPETLEDDMAANMRDFLANKKKGLALDKGKGVITLSKVFQWFEGDFMKAGHA-SVLDALMPFMPEDVCDYVRQNKESLRV-AHFEYDWGLNG 927
+GK L +A A TG PD+ A+ ++LQAH+ P TL+G+ +N VDY +R DP+F + +LE G+ E A WIN+YN LA+K V+D+ +ASIK+VG L PVWKR AG VGG+ ++LD IEN LR P G +P +H IVCAS CPD+ Y L+ + R +LAN KGL L+ G V +SK+F WF+ DF K G + L P P+ + R+ A Y+W LNG
Sbjct: 2 RGKINLFLALLLAATGALAREPDWSAYVRLLQAHVHPGTLQGVHLNRVDYSALRRDPDFTAAIATLEGFDPKQLSGRKERLAFWINAYNLLAMKVVLDH-----------WPVASIKEVGNFLFPVWKRDAGKVGGKAVTLDGIENEVLR-PLG---EPRVHMAIVCASIGCPDLRREPYTAAALDGQLDDQARAYLANPDKGLRLEAG--VAHVSKIFDWFDQDFDKVGGVPAFLARYAPHWPDP----------APRIEADIPYNWSLNG 246
BLAST of mRNA_H-paniculata_contig134.2125.1 vs. uniprot
Match: A0A7T0G4N3_9BACT (DUF547 domain-containing protein n=1 Tax=Candidatus Nitrohelix vancouverensis TaxID=2705534 RepID=A0A7T0G4N3_9BACT) HSP 1 Score: 171 bits (433), Expect = 1.180e-46 Identity = 88/248 (35.48%), Postives = 145/248 (58.47%), Query Frame = 1
Query: 190 DYDAWGKVLQAHIKPTTLRGIAVNAVDYDGIRSDPNFDIFVQSLETAPTTGGKAEEYAL--WINSYNALAIKTVIDNPCKKQLLGMKKTKIASIKDVGTVLHPVWKRPAGVVGGETLSLDDIENVKLRTPEGYPADPLLHACIVCASASCPDVALTVYKPETLEDDMAANMRDFLANKKKGLALDKGKGVITLSKVFQWFEGDF-MKAGHASVLDALMPFMPEDVCDYVRQNKESLRVAHFEYDWGLN 924
D+ W ++L+ +KP ++RGI++ VDY G++ D F+ + L+TA + K + AL WIN YN LA+K ++D+ + SI+D+G++ VW RPAG+VGG+ +L+D+E+ LR +P +H IVCAS SCPD+A+ Y E+L + FL N+KKGL +D+ + I +S +F+WFE DF K G + + A ++P ++ N++ + + + +YDWG+N
Sbjct: 29 DFSDWDQILKQRVKPGSIRGISLYTVDYGGLKGDEKFEQLLSRLKTANLSSIKQGDPALAFWINVYNILAVKMIVDHH-----------PLDSIRDIGSIFKSVWNRPAGIVGGKEYTLNDVEHEILRKM----GEPRIHVAIVCASVSCPDLAMEAYTAESLNQQLERQTALFLGNEKKGLKIDRKQRKIYVSSIFKWFEEDFDAKGGVRAFIGA---YLPPKERSFI--NQKDVSIDYLDYDWGVN 256
BLAST of mRNA_H-paniculata_contig134.2125.1 vs. uniprot
Match: A0A523N030_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospina sp. TaxID=2024844 RepID=A0A523N030_9BACT) HSP 1 Score: 169 bits (428), Expect = 9.970e-46 Identity = 93/247 (37.65%), Postives = 136/247 (55.06%), Query Frame = 1
Query: 190 DYDAWGKVLQAHIKPTTLRGIAVNAVDYDGIRSDPNFDIFVQSLET-APTT-GGKAEEYALWINSYNALAIKTVIDNPCKKQLLGMKKTKIASIKDVGTVLHPVWKRPAGVVGGETLSLDDIENVKLRTPEGYPADPLLHACIVCASASCPDVALTVYKPETLEDDMAANMRDFLANKKKGLALDKGKGVITLSKVFQWFEGDFMKAGHASVLDALMPFMPEDVCDYVRQNKESLRVAHFEYDWGLN 924
D+ W +L+ H+ P T+ G+ + VDY G++ DP + + L+T +P T E+ A WIN YN +A+K V D+ + SIKD G + VWK+ AGVVGG+ ++L +IE+ LR DP +H IVCAS SCPD+ Y E L+ + ++ FLAN KGL +D+ +G+ITLSK+F WFE DF G VL L + PE ++ V++ +Y+W LN
Sbjct: 45 DFSGWDGLLKRHVGPATIAGVRLAGVDYPGVKKDPAYSKLIGELKTFSPATLNTLKEKLAFWINVYNIMAVKMVADH-----------YPVDSIKDAGNLFGSVWKKTAGVVGGKEVTLHEIEHEILRKM----GDPRIHIAIVCASVSCPDLRKEAYTKERLDQQLDDQLQRFLANPGKGLKVDRARGLITLSKIFDWFEDDFETKG--GVLPFLARYAPEPDRSLLKNGDAD--VSYLDYNWDLN 272
BLAST of mRNA_H-paniculata_contig134.2125.1 vs. uniprot
Match: A0A845JWW4_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A845JWW4_9BACT) HSP 1 Score: 166 bits (421), Expect = 8.420e-45 Identity = 85/247 (34.41%), Postives = 142/247 (57.49%), Query Frame = 1
Query: 190 DYDAWGKVLQAHIKPTTLRGIAVNAVDYDGIRSDPNFDIFVQSLETAPTTGGKAEEYAL--WINSYNALAIKTVIDNPCKKQLLGMKKTKIASIKDVGTVLHPVWKRPAGVVGGETLSLDDIENVKLRTPEGYPADPLLHACIVCASASCPDVALTVYKPETLEDDMAANMRDFLANKKKGLALDKGKGVITLSKVFQWFEGDFMKAGHASVLDALMPFMPEDVCDYVRQNKESLRVAHFEYDWGLN 924
D+ W +++ H++P T+ GI +NAVDY ++ DP F+ + L +A K ++ L WIN+YN A K V D+ I SIKD G++ VWK+PAG+VGG+ +L++IE+ LR + +P +H IVCAS SCPD+ L Y+ + L + + M+ FL + KKG+ ++ + LS +F+WFE DF G VL + ++ ++ +R++ +++++ +Y+WGLN
Sbjct: 38 DFSGWDALVKKHVRPKTVDGILINAVDYKSLKDDPGFNNLIAGLNSARLNSLKTKQDKLVFWINTYNIFAAKMVTDH-----------YPIKSIKDAGSLFSRVWKKPAGLVGGKERTLNEIEHEILRKMD----EPRIHVAIVCASVSCPDLRLEAYRVDRLNEQLDDQMKKFLKSSKKGMRIEGRGNRVYLSAIFKWFEEDFESRG--GVLKFIGNYVSPEIAKELRRS--GIKISYLDYNWGLN 265
BLAST of mRNA_H-paniculata_contig134.2125.1 vs. uniprot
Match: A0A2H0MVD3_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_45_15 TaxID=1974048 RepID=A0A2H0MVD3_9BACT) HSP 1 Score: 164 bits (416), Expect = 4.790e-44 Identity = 94/283 (33.22%), Postives = 148/283 (52.30%), Query Frame = 1
Query: 82 LGVLTALAAEISVNSCTSRQGKAPLVMADRAAVTGPDYDAWGKVLQAHIKPTTLRGIAVNAVDYDGIRSDPNFDIFVQSLETAPTTGGKAEE--YALWINSYNALAIKTVIDNPCKKQLLGMKKTKIASIKDVGTVLHPVWKRPAGVVGGETLSLDDIENVKLRTPEGYPADPLLHACIVCASASCPDVALTVYKPETLEDDMAANMRDFLANKKKGLALDKGKGVITLSKVFQWFEGDFMKAGHASVLDALMPFMPEDVCDYVRQNKESLRVAHFEYDWGLN 924
L ++ L + +VNS ++ G D+ W +L+ ++ +R I +N +DY ++ + +Q LE + K E A WIN YN LA+K V+D+ + SIKD+G++ VWKRPAG V GE +L+DIE+ LR +P +HA IVCAS SCPD++ TV+ PETL+ + M+ F+ N KGL +D+ + LS +F+WF DF G VL + ++ + ++ N+ +++F+YDWGLN
Sbjct: 18 LAIMILLVSSFTVNSVQAK---------------GFDFSEWDSILKENVSTKIIREIPLNVLDYKKLKYNSQLKNLLQRLENTDISNLKKREEVLAFWINVYNILAVKMVLDH-----------YPVKSIKDIGSIFRSVWKRPAGKVAGEERTLNDIEHEILRKM----GEPRIHAAIVCASVSCPDLSKTVFVPETLDAQLDWQMKVFVHNSAKGLVIDREGKRVQLSAIFKWFAEDFKSKG--GVLSFVGAYLSPEDNKFI--NRPDTEISYFDYDWGLN 266
BLAST of mRNA_H-paniculata_contig134.2125.1 vs. uniprot
Match: A0A382J5A4_9ZZZZ (DUF547 domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382J5A4_9ZZZZ) HSP 1 Score: 162 bits (411), Expect = 2.060e-43 Identity = 92/252 (36.51%), Postives = 139/252 (55.16%), Query Frame = 1
Query: 190 DYDAWGKVLQAHIKPTTLRGIAVNAVDYDGIRSDPNFDIFVQSLE--TAPTTGGKAEEYALWINSYNALAIKTVIDNPCKKQLLGMKKTKIASIKDVGTVLHPVWKRPAGVVGGETLSLDDIENVKLRTPEGYPADPLLHACIVCASASCPDVALTVYKPETLEDDMAANMRDFLANKKKGLALDKGKGV--ITLSKVFQWFEGDFMKAGHASVLDALMPFMPEDVCDYVRQNKESLRVAHFEYDWGLNGPS 933
D+ W K+L+ H+KP+ L GI++N VDY+ ++SD F + L + + E+ WIN YN A+K V DN + SIK+VG + VWK AG VGG+ SLD+IE+ LR DP +HA IVCAS SCP++++T Y+ E + + M+DFLAN KG+ +D I LS +F WFE DF +G VL+ + P++ Y+ +N + +++ +Y+W +N S
Sbjct: 27 DFTDWDKILKKHVKPSQLSGISLNTVDYEKLKSDSIFYRLQKKLNLFSPSDLNTEKEKLTFWINVYNIFAVKVVTDN-----------YPLRSIKEVGGLFTSVWKIKAGTVGGKKYSLDEIEHKILRKM----GDPRIHAAIVCASISCPNLSVTAYQSEMINKQLDVQMKDFLANANKGMRIDSTAKPTKIILSPIFNWFEDDFKSSG--GVLNFIKPYVLSKY-KYILENAK-YSISYMDYNWSINDSS 259 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig134.2125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig134.2125.1 >prot_H-paniculata_contig134.2125.1 ID=prot_H-paniculata_contig134.2125.1|Name=mRNA_H-paniculata_contig134.2125.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=302bp MLTRLQFLGVLTALAAEISVNSCTSRQGKAPLVMADRAAVTGPDYDAWGKback to top mRNA from alignment at H-paniculata_contig134:35436..42250- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig134.2125.1 ID=mRNA_H-paniculata_contig134.2125.1|Name=mRNA_H-paniculata_contig134.2125.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6815bp|location=Sequence derived from alignment at H-paniculata_contig134:35436..42250- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig134:35436..42250- >mRNA_H-paniculata_contig134.2125.1 ID=mRNA_H-paniculata_contig134.2125.1|Name=mRNA_H-paniculata_contig134.2125.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1812bp|location=Sequence derived from alignment at H-paniculata_contig134:35436..42250- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |