mRNA_H-paniculata_contig134.2123.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig134.2123.1 vs. uniprot
Match: A0A6H5L503_9PHAE (ApbA_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L503_9PHAE) HSP 1 Score: 459 bits (1180), Expect = 1.510e-153 Identity = 241/403 (59.80%), Postives = 288/403 (71.46%), Query Frame = 3
Query: 30 LRKKPRVGIIHSTKSKITTAGKDLAVYLGVCLQLGGYSDVRIIGF--------SSEAAESKPADVS-----------PHGKFLVVPYESKDPISPNHCECFRDEWKSLGDCNMVLMCVDPPDTASCAQALASVMKPEADIAIISFDLGVRNHAAVQEHLANHGIGVLAGAVGICVVRDPVNGYLRCLGSGTLVVERLSKKQSKEGMKFINLLRSAGIPVRHCKNVTSYSHGAIAFNTVYAAAALAGLPLREFLRDRSARLLWAAMVREALQVLVLSARGGSWRPANPCCSLTLSQLELLLCLPTPLFGLLSRLVLRFAPTLAPPMQMDLTRGRETAVAWTLGEVVRIGDTYNTPVPACHAVYSAVTLAVRVGNGVPSKKPQSL-IAQAYGPEASMSARALRRK 1178
LRKKP V ++HS SK T+AG+DLA+YLGVCLQLGGYSDVRI+GF SS A+ DV G+FLVVPY P PNH ECFRD W+SL CN++L+CVDP DT++CA AL+S ++ +D AIISFDLG++NH AV+EHL NH + L GAVGI V R PV+G+LRCLG G+LV+ERLSK+QSK G+KF+NLLRS GIPV HCKNV SY+HG + FNTV+A AALAG LR+ +RDR ARLLWAAM+RE LQ L L+ARGG WR ANPCC +TL QLEL LCLPT LF L+S L+LRF P LAP MQ DL GR+T+VAWTL E+VRI D + PAC AV SAV V G+GVPS +P+ L S S+RAL RK
Sbjct: 3 LRKKPLVAVVHSASSKSTSAGEDLAIYLGVCLQLGGYSDVRIVGFDGAKRTPRSSNKADGGADDVGGVPPRQRQQRKQSGRFLVVPYAGDKPKYPNHAECFRDTWESLSKCNVILICVDPADTSACALALSSAVERGSDKAIISFDLGIKNHMAVEEHLGNHNLVFLGGAVGISVARSPVDGHLRCLGGGSLVLERLSKQQSKRGVKFVNLLRSGGIPVLHCKNVRSYTHGVVIFNTVHAPAALAGGSLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRIADKHKGSAPACGAVLSAVKKCVSEGDGVPSTRPRDLPFVSELLSGGSDSSRALNRK 405
BLAST of mRNA_H-paniculata_contig134.2123.1 vs. uniprot
Match: D7FJE1_ECTSI (2-dehydropantoate 2-reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJE1_ECTSI) HSP 1 Score: 272 bits (696), Expect = 1.110e-84 Identity = 135/194 (69.59%), Postives = 158/194 (81.44%), Query Frame = 3
Query: 432 AVQEHLANHGIGVLAGAVGICVVRDPVNGYLRCLGSGTLVVERLSKKQSKEGMKFINLLRSAGIPVRHCKNVTSYSHGAIAFNTVYAAAALAGLPLREFLRDRSARLLWAAMVREALQVLVLSARGGSWRPANPCCSLTLSQLELLLCLPTPLFGLLSRLVLRFAPTLAPPMQMDLTRGRETAVAWTLGEVVRI 1013
AV+EHL NH + L GAVGI V R PV+G+LRCLG G+LV+ERL+K+QSK G+KF+NLLRS GIPV HCKNV SY+HG + FNTV+AAAALAG PLR+ +RDR ARLLWAAM+RE LQ L L+ARGG WR ANPCC +TL QLEL LCLPT LF L+S L+LRF P LAP MQ DL GR+T+VAWTL E+VRI
Sbjct: 2 AVEEHLGNHNLVFLGGAVGISVARSPVDGHLRCLGGGSLVLERLTKQQSKRGVKFVNLLRSGGIPVLHCKNVRSYTHGVVIFNTVHAAAALAGGPLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRI 195
BLAST of mRNA_H-paniculata_contig134.2123.1 vs. uniprot
Match: A0A2G6KRZ4_9GAMM (2-dehydropantoate 2-reductase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2G6KRZ4_9GAMM) HSP 1 Score: 100 bits (250), Expect = 1.720e-19 Identity = 90/295 (30.51%), Postives = 140/295 (47.46%), Query Frame = 3
Query: 264 CEC----FRDEWKSLGDCNMVLMCVDPPDTASCAQALASVMKPEADIAIISFDLGVRNHAAVQEHLANHGIGVLAGAVGICVVRDPVNGYLRCLGSGTLVVERLSKKQSKEGMKFINLLRSAGIPVRHCKNVTSYSHGAIAFNTVYAAAALAGLPLREFLRDRSARLLWAAMVREALQVL----VLSARGGSWRPANPCCSLTLSQLELLLCLPTPLFGLLSRLVLRFAPTLAPPMQMDLTRGRETAVAWTLGEVVRIGDTYNTPVPACHAVYSAVTLAVRVGNGVPSKKPQSLI 1124
C C F D ++ D + +L+ V PDT A L +K A +A SF G+RN +++H+ ++ VL G V V NG C G L +E S++ ++ + + LL S+G+P + C + S G + N ALAG+PL E L R R + AA +REAL+VL + AR G P S + +L LP+ LF L++R +L+ P MQ DL GR+T V + GE++ +G+ P + + V + +G P + L+
Sbjct: 55 CACDRFTFSDRPEACRDADFILVTVKSPDTTDAAIQLGPHIKQGAVVA--SFQNGIRNADLLRKHIKDNP--VLTGMVSFNVSHTG-NGRFHCGTEGYLALE--SRQDIEKPL--VRLLDSSGLPCQACPEMKSVQWGKLIMNLNNPVNALAGIPLIEELEQRKYRKVLAASIREALEVLKQAGIKPARIGKVPP---------SLMPAILELPSWLFKLVARAMLKIDPQATSSMQEDLVSGRKTEVDYLNGEIITLGEKSGLQCPVNRKIVALVKESESGRSGSPKLSARRLL 331
BLAST of mRNA_H-paniculata_contig134.2123.1 vs. uniprot
Match: A0A1H1ZMK9_9BRAD (2-dehydropantoate 2-reductase n=1 Tax=Bradyrhizobium canariense TaxID=255045 RepID=A0A1H1ZMK9_9BRAD) HSP 1 Score: 91.3 bits (225), Expect = 2.520e-16 Identity = 85/276 (30.80%), Postives = 121/276 (43.84%), Query Frame = 3
Query: 294 LGDCNMVLMCVDPPDTASCAQALASVMKPEADIAIISFDLGVRNHAAVQEHLANHGIGVLAGAVGICVVRDPVNGYLRCLGSGTLVVERLSKKQSKEGMKFINLLRSAGIPVRHCKNVTSYSHGAIAFNTVYAAAALAGLPLREFLRDRSARLLWAAMVREALQVLVLSARGGSWRPANPCCSLTLSQLELLLCLPTPLFGLLSRLVLRFAPTLAPPMQMDLTRGRETAVAWTLGEVVRIGDTYNTPVPACHAVYSAVTLAVRVGNGVPSKKPQSL 1121
LG+ +VL+ V DTA A +A AD I+S GV N AA+++ L G VLAG V V+ P G SG +V+E+ + + L + G+ +R N+ G + N A ALAGLPLR+ L RS R L+A + E L + R RP +P + S LL LP +F L ++ P M DL R R T + + G + I D + PVP + + + A G G P P +
Sbjct: 73 LGNAGVVLVTVKSADTAEIADIIAE--HAPADAVIVSLQNGVGNTAALRQRLP--GRRVLAGMVPFNVIA-PGEGRFHRATSGDIVIEQDDARTAAG-------LAAPGLAMRATDNIAGVQWGKLLVNLNNALNALAGLPLRQQLAQRSWRRLFADQMTEGLAAI----RADGIRPVSPT-PIPPSWTPSLLRLPDVVFETLLGRTMKIDPEARSSMWEDLQRRRRTEIDYLQGVIAEIADRHGLPVPLSRRIVALIKRAEAEGKGSPGLTPDQI 331
BLAST of mRNA_H-paniculata_contig134.2123.1 vs. uniprot
Match: A0A533J2S8_9BRAD (2-dehydropantoate 2-reductase n=1 Tax=Bradyrhizobium icense TaxID=1274631 RepID=A0A533J2S8_9BRAD) HSP 1 Score: 89.7 bits (221), Expect = 8.260e-16 Identity = 86/276 (31.16%), Postives = 120/276 (43.48%), Query Frame = 3
Query: 294 LGDCNMVLMCVDPPDTASCAQALASVMKPEADIAIISFDLGVRNHAAVQEHLANHGIGVLAGAVGICVVRDPVNGYLRCLGSGTLVVERLSKKQSKEGMKFINLLRSAGIPVRHCKNVTSYSHGAIAFNTVYAAAALAGLPLREFLRDRSARLLWAAMVREALQVLVLSARGGSWRPANPCCSLTLSQLELLLCLPTPLFGLLSRLVLRFAPTLAPPMQMDLTRGRETAVAWTLGEVVRIGDTYNTPVPACHAVYSAVTLAVRVGNGVPSKKPQSL 1121
D +VL+ V DTA A +A AD I+S GV N A ++E L G VL G V V+ G SG +V+ER + ++ L G+ VR N+ G + FN A ALA LPLR+ L RS R L+A V EAL + R +P + L +S + LL LP LFG++ R ++ P M DL RGR T + + G + I + VP + + A G G P P+ +
Sbjct: 73 FADAAIVLVTVKSADTAGMADLIAR--HAPADAVIVSLQNGVGNAAVLREKLP--GRTVLGGMVPYNVIALG-EGRFHQATSGDIVIERDAADTAER-------LSVPGLQVRATDNIAGVQWGKLLFNLNNALNALADLPLRQQLAQRSWRKLYADQVAEALAAI----RADGIKPVSSA-PLPVSFMPPLLRLPDALFGIVLRRTMKIDPEARSSMWEDLQRGRRTEIDYLQGVITAIAERRGLAVPLSRRIVELIRKAEADGKGSPGLTPEQV 331
BLAST of mRNA_H-paniculata_contig134.2123.1 vs. uniprot
Match: M6D694_9LEPT (2-dehydropantoate 2-reductase n=14 Tax=Leptospira TaxID=171 RepID=M6D694_9LEPT) HSP 1 Score: 87.8 bits (216), Expect = 4.220e-15 Identity = 83/265 (31.32%), Postives = 124/265 (46.79%), Query Frame = 3
Query: 288 KSLGDCNMVLMCVDPPDTASCAQALASVMKPE--ADIAIISFDLGVRNHAAVQEHLANHGIGVLAGAVGICVVRDPVNGYLRCLGSGTLVVERLSKKQSKEGMKFINLLRSAGIPVRHCKNVTSYSHGAIAFNTVYAAAALAGLPLREFLRDRSARLLWAAMVREALQVLVLSARGGSWRPANPCCSLTLSQLELLLCLPTPLFGLLSRLVLRFAPTLAPPMQMDLTRGRETAVAWTLGEVVRIGDTYNTPVPACHAVYSAVTLA 1076
K D N+ L+ V DT +++ S+ PE + I IISF GVRN + L +AG V VV G SG LVV K ++ G K + LR AG+P KN+ G + FN + ALAG+PLRE L R+ R + A+M+ E L++L LS +PA+ + ++L LP LF ++ +++ P M DL GR T +++ GE++R+ D P + S + A
Sbjct: 71 KEAKDSNVFLITVKSKDTIEVGKSIRSLFSPEELSKIVIISFQNGVRNSKELASVLPELNDRNVAGMVPFNVVAKG-KGQFHQGTSGELVV-----KSNEFGNKIHSYLRKAGLPSIIHKNMEGVLWGKLLFNLNNSLNALAGIPLREELSQRTYRKILASMITEGLEILKLSGI----QPASVGKMIPWLA-PIILKLPDFLFFRVASSMVKIDPEARSSMWEDLHHGRTTEISFLNGEIIRLADEIGHKAPINRKIASLIAEA 324
BLAST of mRNA_H-paniculata_contig134.2123.1 vs. uniprot
Match: A0A5F1ZQL1_9LEPT (2-dehydropantoate 2-reductase n=2 Tax=Leptospira TaxID=171 RepID=A0A5F1ZQL1_9LEPT) HSP 1 Score: 86.3 bits (212), Expect = 1.370e-14 Identity = 96/342 (28.07%), Postives = 145/342 (42.40%), Query Frame = 3
Query: 63 STKSKITTAGKDLAVYLGVCLQLGGYSDVRIIGFSSEAAESKPADVSPHGKFLVVPYESKD-PISPNHCECFRDEWKSLGDCNMVLMCVDPPDTASCAQALASVMKPE--ADIAIISFDLGVRNHAAVQEHLANHGIGVLAGAVGICVVRDPVNGYLRCLGSGTLVVERLSKKQSKEGMKFINLLRSAGIPVRHCKNVTSYSHGAIAFNTVYAAAALAGLPLREFLRDRSARLLWAAMVREALQVLVLS----ARGGSWRPANPCCSLTLSQLELLLCLPTPLFGLLSRLVLRFAPTLAPPMQMDLTRGRETAVAWTLGEVVRIGDTYNTPVPACHAVYSAV 1067
S K I AG + Y+G CL GY V + E ++ G + Y K ++P+ D K D N+ L+ V DT +++ S+ PE + I I+SF G+RN + L L G V VV G SG LV+ + G + LR A +P + KN+ G + FN + ALAG+PLRE L R+ R + A+M+ E L++L LS A G P ++L LP LF ++ +++ P M DL GR+T +++ GE+VR+ D P + S +
Sbjct: 4 SPKFAILGAGS-IGTYIGACLVKAGYPVVFV------GRERLKQEIQLFG-LGISDYNGKSFTLAPSQIRYVTD-IKEAKDSNVFLVTVKSKDTKEIGKSIRSLFSPEELSKIVIVSFQNGIRNSKELASVLPELKDRNLPGMVPFNVVAKG-KGQFHQGTSGELVLP-----SNDYGKRIHYCLRKAALPSKVHKNMDGVLWGKLLFNLNNSLNALAGVPLREELSQRTYRKILASMITEGLEILSLSGIQPASAGKMIPWLA---------PIILNLPDFLFFKVASSMVKIDPEARSSMWEDLHYGRKTEISYLNGEIVRLADEIGHKAPINRKIVSLI 321
BLAST of mRNA_H-paniculata_contig134.2123.1 vs. uniprot
Match: UPI001BA4BF2F (2-dehydropantoate 2-reductase n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=UPI001BA4BF2F) HSP 1 Score: 84.7 bits (208), Expect = 3.880e-14 Identity = 86/277 (31.05%), Postives = 122/277 (44.04%), Query Frame = 3
Query: 291 SLGDCNMVLMCVDPPDTASCAQALASVMKPEADIAIISFDLGVRNHAAVQEHLANHGIGVLAGAVGICVVRDPVNGYLRCLGSGTLVVERLSKKQSKEGMKFINLLRSAGIPVRHCKNVTSYSHGAIAFNTVYAAAALAGLPLREFLRDRSARLLWAAMVREALQVLVLSARGGSWRPANPCCSLTLSQLELLLCLPTPLFGLLSRLVLRFAPTLAPPMQMDLTRGRETAVAWTLGEVVRIGDTYNTPVPACHAVYSAVTLAVRVGNGVPSKKPQSL 1121
+ D +VL+ V DTA+ A+ +A PE D I+S GV N A ++E L G VL G V V+ + R SG +V+ER + + L G+ +R N+T G + FN A ALA LPLR L RS R L+A V EAL + A G +P + L +S + LL LP LF ++ ++ P M DL RGR T + + G + I D P + + A G G P P+ +
Sbjct: 72 AFADAAVVLVTVKSADTAAMAEIIAG-HAPE-DAVIVSLQNGVSNLALLREKLP--GRRVLGGMVPYNVIALGAGRFHRAT-SGDIVIERDDADTAAK-------LSVPGLKLRATDNITGVQWGKLLFNLNNALNALANLPLRRQLAQRSWRRLYADQVAEALAAI--EAEG--IKPVSTA-PLPVSWMPPLLRLPDALFEVVLGRTMKIDPEARSSMWEDLQRGRRTEIDYLQGVITEIADRRGLAAPLSRRIVELIRKAEADGKGSPGLTPEQI 331
BLAST of mRNA_H-paniculata_contig134.2123.1 vs. uniprot
Match: A0A7S9CTR5_9BRAD (2-dehydropantoate 2-reductase n=1 Tax=Bradyrhizobium genosp. L TaxID=83637 RepID=A0A7S9CTR5_9BRAD) HSP 1 Score: 78.2 bits (191), Expect = 5.990e-12 Identity = 85/300 (28.33%), Postives = 123/300 (41.00%), Query Frame = 3
Query: 222 VVPYESKDPISPNHCECFRDEWKSLGDCNMVLMCVDPPDTASCAQALASVMKPEADIAIISFDLGVRNHAAVQEHLANHGIGVLAGAVGICVVRDPVNGYLRCLGSGTLVVERLSKKQSKEGMKFINLLRSAGIPVRHCKNVTSYSHGAIAFNTVYAAAALAGLPLREFLRDRSARLLWAAMVREALQVLVLSARGGSWRPANPCCSLTLSQLELLLCLPTPLFGLLSRLVLRFAPTLAPPMQMDLTRGRETAVAWTLGEVVRIGDTYNTPVPACHAVYSAVTLAVRVGNGVPSKKPQSL 1121
V ++ + I P D+ D VL+ V DT A +A P+ D ++S GV N ++EHLA G VL G V VV NG SG +V+ +++ L G+ V N+ G + N A ALA +PLR+ L RS R L+A + E L + R RP +P L S + LL LP LF +L ++ P M DL RGR T + + G + I D P + + + A G+G P P+ +
Sbjct: 48 VSSFDGSERIIPADRMTLSDDPAIFRDAQTVLVTVKSADTPEMADLVAR-HAPD-DAVVVSLQNGVGNVPRLREHLA--GRRVLGGMVPFNVVALG-NGRFHRSTSGDIVI-------AQDDAGTAARLAVQGLAVGATDNIDGVQWGKLIVNLNNALNALADIPLRQQLAQRSWRYLFADQMVEGLAAV----RAEGIRPVSPT-PLPSSWMPPLLRLPDALFDMLLGRTMKIDPEARSSMWEDLKRGRRTEIDYLQGVITEIADRCGLEAPLSRRIIALIRKAEASGDGSPGLTPEQI 330
BLAST of mRNA_H-paniculata_contig134.2123.1 vs. uniprot
Match: A0A0F7M1S4_9GAMM (2-dehydropantoate 2-reductase n=1 Tax=Spongiibacter sp. IMCC21906 TaxID=1620392 RepID=A0A0F7M1S4_9GAMM) HSP 1 Score: 72.8 bits (177), Expect = 3.560e-10 Identity = 76/273 (27.84%), Postives = 115/273 (42.12%), Query Frame = 3
Query: 273 FRDEWKSLGDCNMVLMCVDPPDTASCAQALASVMKPEADIAIISFDLGVRNHAAVQEHLANHGIGVLAGAVGICVVRDPVNGYLRCLGSGTLVVERLSKKQSKEGMKFINLLRSAGIPVRHCKNVTSYSHGAIAFNTVYAAAALAGLPLREFLRDRSARLLWAAMVREALQVLVLS--------ARGGSWRPANPCCSLTLSQLELLLCLPTPLFGLLSRLVLRFAPTLAPPMQMDLTRGRETAVAWTLGEVVRIGDTYNTPVPACHAVYSAV 1067
+R +L + V + V DT + QALA +KP+A ++S GV N ++ L NH VLAG V V++ G G + +E + + L R +G + N++ + N ALA +PL+E L+ RS R A + EAL+ L LS A W P +L LP+ LF L+++ +L P M DL RGR T + GEV+R+ T PA + + +
Sbjct: 64 YRCGLDALDEVTTVFVTVKCSDTEAVGQALAQQLKPDA--VVVSLQNGVGNGDILRACLPNHT--VLAGMVSFNVLQQG-QGRFHAGTQGNITIE-----DAPLSRELAPLFRVSGTQYQTSDNMSGVLWSKLLLNLNNPINALANIPLKEQLKQRSYRRSLAILQEEALRALALSDIDLPRLNALPPRWIPR-------------VLRLPSVLFRLIAQRMLAIDPLARSSMWEDLQRGRSTEIDALSGEVLRLAQRVGTAAPANRKIVALI 313 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig134.2123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig134.2123.1 >prot_H-paniculata_contig134.2123.1 ID=prot_H-paniculata_contig134.2123.1|Name=mRNA_H-paniculata_contig134.2123.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=396bp MATLRKKPRVGIIHSTKSKITTAGKDLAVYLGVCLQLGGYSDVRIIGFSSback to top mRNA from alignment at H-paniculata_contig134:13971..19277- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig134.2123.1 ID=mRNA_H-paniculata_contig134.2123.1|Name=mRNA_H-paniculata_contig134.2123.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5307bp|location=Sequence derived from alignment at H-paniculata_contig134:13971..19277- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig134:13971..19277- >mRNA_H-paniculata_contig134.2123.1 ID=mRNA_H-paniculata_contig134.2123.1|Name=mRNA_H-paniculata_contig134.2123.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2376bp|location=Sequence derived from alignment at H-paniculata_contig134:13971..19277- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |