prot_H-paniculata_contig134.2122.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig134.2122.1
Unique Nameprot_H-paniculata_contig134.2122.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length43
Homology
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BLAST of mRNA_H-paniculata_contig134.2122.1 vs. uniprot
Match: D7FJD4_ECTSI (Homeobox domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FJD4_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 5.090e-12
Identity = 31/43 (72.09%), Postives = 38/43 (88.37%), Query Frame = 0 
Query:    1 QFLEEREAGNSTSLVPPPSLQRFIGAEGFAAFVGD-RANKRQR 42
            +FLEER+ G+ ++LVPPPSLQRFIGA+GFAAF GD RA+KR R
Sbjct:  314 KFLEERQMGHGSTLVPPPSLQRFIGAQGFAAFAGDGRASKRSR 356
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig134.2122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJD4_ECTSI5.090e-1272.09Homeobox domain-containing protein n=3 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig134contigH-paniculata_contig134:310..438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig134.2122.1mRNA_H-paniculata_contig134.2122.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig134 310..438 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig134.2122.1 ID=prot_H-paniculata_contig134.2122.1|Name=mRNA_H-paniculata_contig134.2122.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=43bp
QFLEEREAGNSTSLVPPPSLQRFIGAEGFAAFVGDRANKRQR*
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