prot_H-paniculata_contig13391.2120.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13391.2120.1
Unique Nameprot_H-paniculata_contig13391.2120.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length107
Homology
BLAST of mRNA_H-paniculata_contig13391.2120.1 vs. uniprot
Match: D8LSW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW6_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 1.580e-35
Identity = 73/85 (85.88%), Postives = 77/85 (90.59%), Query Frame = 0
Query:   20 VPERVTELTDERLKLTNQAVTGARLMKINAWEPALEKEIRRVRAEEIRVLLKATLLRVINKAMFFVQPTVVGFLVFGTYHLLDNV 104
            V +RVT LTDER+KLTNQAVTGARLMKINAWEPALEKEIRRVRAEEIRVLLKATLLR IN+AMFFVQP V+  LVF TYHLL NV
Sbjct:  259 VRQRVTVLTDERVKLTNQAVTGARLMKINAWEPALEKEIRRVRAEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNV 343          
BLAST of mRNA_H-paniculata_contig13391.2120.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 1.580e-35
Identity = 75/101 (74.26%), Postives = 81/101 (80.20%), Query Frame = 0
Query:    8 IPCTGSVFTEVS-VPERVTELTDERLKLTNQAVTGARLMKINAWEPALEKEIRRVRAEEIRVLLKATLLRVINKAMFFVQPTVVGFLVFGTYHLLDNVRVP 107
            +P  G+     S V +RVT LTDER+ LTNQAV GARLMKINAWEPALEKEIRRVRAEEIRVLLKATLLR IN+AMFFVQP V+  LVF TYHLL NV  P
Sbjct:  193 VPMQGAFSRRFSQVRQRVTVLTDERVNLTNQAVAGARLMKINAWEPALEKEIRRVRAEEIRVLLKATLLRAINEAMFFVQPAVISCLVFATYHLLGNVLAP 293          
BLAST of mRNA_H-paniculata_contig13391.2120.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 2.950e-35
Identity = 73/101 (72.28%), Postives = 81/101 (80.20%), Query Frame = 0
Query:    8 IPCTGSVFTEVS-VPERVTELTDERLKLTNQAVTGARLMKINAWEPALEKEIRRVRAEEIRVLLKATLLRVINKAMFFVQPTVVGFLVFGTYHLLDNVRVP 107
            +P  G+     S V +RVT LTDER+KLTNQAV GARLMKINAWEPALEKEIRRVRAEEIRVLL ATLLR +N+AMFF+QP V+  LVF TYHLL NV  P
Sbjct:  146 VPAQGAFSRRFSQVRQRVTVLTDERVKLTNQAVAGARLMKINAWEPALEKEIRRVRAEEIRVLLTATLLRAVNEAMFFIQPAVISCLVFATYHLLGNVLAP 246          
BLAST of mRNA_H-paniculata_contig13391.2120.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 3.150e-16
Identity = 50/95 (52.63%), Postives = 57/95 (60.00%), Query Frame = 0
Query:   13 SVFTEVSVPERVTELTDERLKLTNQAVTGARLMKINAWEPALEKEIRRVRAEEIRVLLKATLLRVINKAMFFVQPTVVGFLVFGTYHLLDNVRVP 107
            ++   + V +RVT LTDER+ LTNQAV                       AEEIRVLLKATLLR IN+AMFFVQP V+  LVF TYHLL NV  P
Sbjct:   85 ALIVPMQVRQRVTVLTDERVNLTNQAV-----------------------AEEIRVLLKATLLRAINEAMFFVQPAVISCLVFATYHLLGNVLAP 156          
BLAST of mRNA_H-paniculata_contig13391.2120.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 2.620e-12
Identity = 37/48 (77.08%), Postives = 40/48 (83.33%), Query Frame = 0
Query:   60 RVRAEEIRVLLKATLLRVINKAMFFVQPTVVGFLVFGTYHLLDNVRVP 107
            +VRAEEIRVLLKATLLR IN+AMFFVQP V+  LVF TYHLL NV  P
Sbjct:  112 KVRAEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNVLTP 159          
BLAST of mRNA_H-paniculata_contig13391.2120.1 vs. uniprot
Match: A0A835YMC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC7_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.630e-12
Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 0
Query:   37 QAVTGARLMKINAWEPALEKEIRRVRAEEIRVLLKATLLRVINKAMFFVQPTVVGFLVFGTY 98
            QAVTGA L+K++AWEPAL +EI + R+ E++VL  A  LR  N+++FFVQPTV+  LVFG +
Sbjct:  338 QAVTGAHLVKMSAWEPALLREIGKARSAEVKVLRSAAELRAANESLFFVQPTVLALLVFGVH 399          
BLAST of mRNA_H-paniculata_contig13391.2120.1 vs. uniprot
Match: A0A4D9D5Z4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5Z4_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.580e-12
Identity = 35/76 (46.05%), Postives = 55/76 (72.37%), Query Frame = 0
Query:   22 ERVTELTDERLKLTNQAVTGARLMKINAWEPALEKEIRRVRAEEIRVLLKATLLRVINKAMFFVQPTVVGFLVFGT 97
            +R ++LTD+R++LT QA+ GAR +K++ WE  LEK I+  RA E+RVL+ A L+R I++ ++F  P +VG + F T
Sbjct:  356 KRASQLTDQRVRLTKQAIQGARTIKMSGWEVLLEKRIKEARAVEMRVLIAAGLVRGIHEGIYFFSPVLVGAVTFLT 431          
BLAST of mRNA_H-paniculata_contig13391.2120.1 vs. uniprot
Match: K8YYX2_NANGC (Multidrug resistance-associated protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YYX2_NANGC)

HSP 1 Score: 70.5 bits (171), Expect = 5.750e-12
Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = 0
Query:   22 ERVTELTDERLKLTNQAVTGARLMKINAWEPALEKEIRRVRAEEIRVLLKATLLRVINKAMFFVQPTVVGFLVFGTYHLLDN 103
            +  ++LTD+R++LT QA+ GAR +K++ WE  LEK I   RA E+RVL+ A LLR I++ + F  P +VG + F TY  L  
Sbjct:  297 KHASQLTDQRVRLTKQAIQGARTIKMSGWEVLLEKRIMEARAVEMRVLIAAGLLRGIHEGISFFSPVLVGAVTFLTYWSLGR 378          
BLAST of mRNA_H-paniculata_contig13391.2120.1 vs. uniprot
Match: A0A4D9D1H5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1H5_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.240e-11
Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = 0
Query:   22 ERVTELTDERLKLTNQAVTGARLMKINAWEPALEKEIRRVRAEEIRVLLKATLLRVINKAMFFVQPTVVGFLVFGTYHLLDN 103
            +  ++LTD+R++LT QA+ GAR +K++ WE  LEK I+  RA E+RVL  A LLR I++ + F  P +VG + F TY  L  
Sbjct:  229 KHASQLTDQRVRLTKQAIQGARTIKMSGWEVLLEKRIKEARAVEMRVLNAAGLLRGIHEGISFFSPVLVGAVTFLTYWSLGR 310          
BLAST of mRNA_H-paniculata_contig13391.2120.1 vs. uniprot
Match: A0A6B0SGP7_9CETA (ABC transmembrane type-1 domain-containing protein n=1 Tax=Bos mutus TaxID=72004 RepID=A0A6B0SGP7_9CETA)

HSP 1 Score: 68.9 bits (167), Expect = 2.060e-11
Identity = 36/94 (38.30%), Postives = 60/94 (63.83%), Query Frame = 0
Query:   10 CTGSVFTEVSVPERVTELTDERLKLTNQAVTGARLMKINAWEPALEKEIRRVRAEEIRVLLKATLLRVINKAMFFVQPTVVGFLVFGTYHLLDN 103
            CTG+ F+  S+  +   LTD+R+++ ++ +TG + +K+NAWE +    I R+R +EI  +LK++ LR +N A FF    ++ F+ F T  LLDN
Sbjct:  250 CTGNSFS--SLRSKTAALTDDRIRIMSEVITGIKTIKMNAWEKSFIDLITRLRRKEISKILKSSYLRAMNLASFFAVSKIMIFVTFITNELLDN 341          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13391.2120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSW6_ECTSI1.580e-3585.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSW4_ECTSI1.580e-3574.26Multidrug resistance-associated protein-like prote... [more]
D8LSW3_ECTSI2.950e-3572.28Multidrug resistance-associated protein-like prote... [more]
A0A6H5JDL0_9PHAE3.150e-1652.63ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5JDN6_9PHAE2.620e-1277.08ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835YMC7_9STRA2.630e-1256.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D5Z4_9STRA3.580e-1246.05Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
K8YYX2_NANGC5.750e-1245.12Multidrug resistance-associated protein (Fragment)... [more]
A0A4D9D1H5_9STRA1.240e-1145.12Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6B0SGP7_9CETA2.060e-1138.30ABC transmembrane type-1 domain-containing protein... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR24223FAMILY NOT NAMEDcoord: 22..102
NoneNo IPR availablePANTHERPTHR24223:SF346ATP-BINDING CASSETTE SUB-FAMILY C MEMBER SURcoord: 22..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..80
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..107
NoneNo IPR availableTMHMMTMhelixcoord: 81..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13391contigH-paniculata_contig13391:4721..6526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13391.2120.1mRNA_H-paniculata_contig13391.2120.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13391 4721..6526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13391.2120.1 ID=prot_H-paniculata_contig13391.2120.1|Name=mRNA_H-paniculata_contig13391.2120.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
MTICTADIPCTGSVFTEVSVPERVTELTDERLKLTNQAVTGARLMKINAW
EPALEKEIRRVRAEEIRVLLKATLLRVINKAMFFVQPTVVGFLVFGTYHL
LDNVRVP
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