mRNA_H-paniculata_contig13373.2110.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13373.2110.1 vs. uniprot
Match: UPI001F5D458B (E3 ubiquitin-protein ligase XB3-like n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D458B) HSP 1 Score: 57.4 bits (137), Expect = 3.330e-7 Identity = 41/121 (33.88%), Postives = 59/121 (48.76%), Query Frame = 1 Query: 25 DDQAPIHLAAMLGHEKTLSSLLMMGADVNAVDIYKISPLPLTACKGRLGAVKVLLEAGADV-RFKGIDGWPLFFRLAMHEFVDVVVKELMEYGVDVM--SW---------DDNGMTTLQIA 351 D +P+H+AA G + LS L GA +AVD +K +PL L A G++G V LL+AGA++ F ++ A + VD + L + SW DDNG T L +A Sbjct: 46 DRLSPLHIAAANGRLEALSMFLDRGAQPDAVDRHKQTPLMLAAMHGKIGCVLKLLQAGANILMFDSVNARTCLHHAAYYGHVDCLDAILCAAQTTAVADSWGYARFMNVRDDNGATPLHLA 166
BLAST of mRNA_H-paniculata_contig13373.2110.1 vs. uniprot
Match: T1MVB2_TRIUA (RING-type domain-containing protein n=1 Tax=Triticum urartu TaxID=4572 RepID=T1MVB2_TRIUA) HSP 1 Score: 55.1 bits (131), Expect = 2.010e-6 Identity = 40/121 (33.06%), Postives = 59/121 (48.76%), Query Frame = 1 Query: 25 DDQAPIHLAAMLGHEKTLSSLLMMGADVNAVDIYKISPLPLTACKGRLGAVKVLLEAGADV-RFKGIDGWPLFFRLAMHEFVDVVVKELMEYGVDVM--SW---------DDNGMTTLQIA 351 D +P+H+AA G + LS L GA ++AVD +K +PL L A G++G V LL+AGA++ F + A + VD + L + SW DD+G T L +A Sbjct: 38 DRLSPLHIAAANGRLEALSMFLDRGAQLDAVDRHKQTPLMLAAMHGKIGCVVKLLQAGANILMFDSVHARTCLHHAAYYGHVDCLDAILSTARTTPVAGSWGFARFVNVRDDHGATPLHLA 158
BLAST of mRNA_H-paniculata_contig13373.2110.1 vs. uniprot
Match: A0A5J9SGG2_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9SGG2_9POAL) HSP 1 Score: 55.1 bits (131), Expect = 2.150e-6 Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 1 Query: 4 PVDCEIEDDQAPIHLAAMLGHEKTLSSLLMMGADVNAV--DI-YKISPLPLTACKGRLGAVKVLLEAGADVRFKGIDGWPLFFRLAMHEFVDV 273 PVD I P+HLAA GH++ + LL GAD N V D + ++PL + C L VK+L++AGADV K ++G + F D+ Sbjct: 161 PVD-PINHRGTPLHLAAAKGHDQVVKILLEHGADPNRVINDFPHLLAPLMMACCGQSLKCVKLLVQAGADVNVKSMNGQTVLMSAIDDGFTDI 252
BLAST of mRNA_H-paniculata_contig13373.2110.1 vs. uniprot
Match: A0A3B5XTL1_WHEAT (RING-type domain-containing protein n=17 Tax=Triticeae TaxID=147389 RepID=A0A3B5XTL1_WHEAT) HSP 1 Score: 55.1 bits (131), Expect = 2.150e-6 Identity = 40/121 (33.06%), Postives = 59/121 (48.76%), Query Frame = 1 Query: 25 DDQAPIHLAAMLGHEKTLSSLLMMGADVNAVDIYKISPLPLTACKGRLGAVKVLLEAGADV-RFKGIDGWPLFFRLAMHEFVDVVVKELMEYGVDVM--SW---------DDNGMTTLQIA 351 D +P+H+AA G + LS L GA ++AVD +K +PL L A G++G V LL+AGA++ F + A + VD + L + SW DD+G T L +A Sbjct: 46 DRLSPLHIAAANGRLEALSMFLDRGAQLDAVDRHKQTPLMLAAMHGKIGCVVKLLQAGANILMFDSVHARTCLHHAAYYGHVDCLDAILSTARTTPVAGSWGFARFVNVRDDHGATPLHLA 166
BLAST of mRNA_H-paniculata_contig13373.2110.1 vs. uniprot
Match: A0A5J5DCB0_9PERO (SOCS box domain-containing protein n=2 Tax=Etheostoma spectabile TaxID=54343 RepID=A0A5J5DCB0_9PERO) HSP 1 Score: 55.1 bits (131), Expect = 2.430e-6 Identity = 36/93 (38.71%), Postives = 49/93 (52.69%), Query Frame = 1 Query: 28 DQAPIHLAAMLGHEKTLSSLLMMGADVNAVDIYKISPLPLTACKGRLGAVKVLLEAGADVRFKGIDGWPLFFRLAMHEFVDVVVKELMEYGVD 306 ++ +H +A LG E + LL GA+ NA DI K +PL L A G L V+VLL+ GA V + G LF A ++ L+EYG D Sbjct: 183 NRTALHESAFLGLENFVYLLLESGANPNACDIKKKTPLALAAQNGHLNVVEVLLQKGAHVWCESESGTILFDAAASGN--PDIISLLLEYGAD 273
BLAST of mRNA_H-paniculata_contig13373.2110.1 vs. uniprot
Match: A0A5Q4BHA3_9PEZI (Ankyrin-1 n=3 Tax=Colletotrichum destructivum species complex TaxID=2707350 RepID=A0A5Q4BHA3_9PEZI) HSP 1 Score: 54.7 bits (130), Expect = 3.270e-6 Identity = 35/109 (32.11%), Postives = 51/109 (46.79%), Query Frame = 1 Query: 16 EIEDDQAPIHLAAMLGHEKTLSSLLMMGADVNAVDIYKISPLPLTACKGRLGAVKVLLEAGADVRFKGIDGWPLFFRLAMHEFVDVVVKELMEYGVDVMSWDDNGMTTL 342 ++E P+H AAM+ + LL GAD N ++ +PL + +G L ++L+E GADV + IDG L A + LM G+D D G T L Sbjct: 1449 DLETSDTPLHGAAMVNCVDSARRLLDHGADPNLCNLNSFTPLTVAVRRGHLEMAQLLVERGADVHARDIDGMSLLNACADASEHPEMFIWLMSLGLDPCRPDGTGYTPL 1557
BLAST of mRNA_H-paniculata_contig13373.2110.1 vs. uniprot
Match: A0A1I8MD57_MUSDO (Uncharacterized protein n=1 Tax=Musca domestica TaxID=7370 RepID=A0A1I8MD57_MUSDO) HSP 1 Score: 54.3 bits (129), Expect = 3.600e-6 Identity = 29/109 (26.61%), Postives = 53/109 (48.62%), Query Frame = 1 Query: 25 DDQAPIHLAAMLGHEKTLSSLLMMGADVNAVDIYKISPLPLTACKGRLGAVKVLLEAGADVRFKGIDGWPLFFRLAMHEFVDVVVKELMEYGVDVMSWDDNGMTTLQIA 351 +++ P+H A G LL AD+ A D+Y ++P L + +K LE GA+ + GW L R + + ++K +M++G D+ + D +T + +A Sbjct: 177 NNRTPLHQAFYYGRVAVARMLLNKKADMEAKDMYGLTPCHLAVDANQGEILKFALENGANAESEDACGWTLLMRAVVMDSDFTILKLIMQFGADLENRDMRNLTCMDLA 285
BLAST of mRNA_H-paniculata_contig13373.2110.1 vs. uniprot
Match: A0A7S0W7K8_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W7K8_9CRYP) HSP 1 Score: 54.3 bits (129), Expect = 3.810e-6 Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 1 Query: 40 IHLAAMLGHEKTLSSLLMMGADVNAVDIYKISPLPLTACKGRLGAVKVLLEAGADVRFK----GIDGWPLFFRLAMHEFVDVVVKELMEYG 300 +HLAAM+GHE +S L + G D++ +P+ L A G G VK+L+ AG D+R K G L R + V+V+++EL G Sbjct: 269 VHLAAMMGHEDIVSFLALSGEDLDKQTEGGWTPMMLAAHAGLAGVVKILVNAGCDLRAKTNDEGHTALDLAERNGHKDIVEVILRELEMSG 359
BLAST of mRNA_H-paniculata_contig13373.2110.1 vs. uniprot
Match: A0A669ENG4_ORENI (SOCS box domain-containing protein n=13 Tax=Percomorphaceae TaxID=1489872 RepID=A0A669ENG4_ORENI) HSP 1 Score: 54.3 bits (129), Expect = 4.140e-6 Identity = 34/93 (36.56%), Postives = 49/93 (52.69%), Query Frame = 1 Query: 28 DQAPIHLAAMLGHEKTLSSLLMMGADVNAVDIYKISPLPLTACKGRLGAVKVLLEAGADVRFKGIDGWPLFFRLAMHEFVDVVVKELMEYGVD 306 ++ +H +A LG E + LL GA+ NA D+ K +PL L A G L V+VLL+ GA V + G LF A ++ L+E+G D Sbjct: 183 NRTALHESAFLGLENFVYLLLESGANPNACDVKKKTPLALAAQNGHLNVVEVLLQKGAQVWCESESGTILFDAAASGN--PDIISSLLEHGAD 273
BLAST of mRNA_H-paniculata_contig13373.2110.1 vs. uniprot
Match: A0A6P7N0V8_BETSP (dynein heavy chain 12, axonemal isoform X1 n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7N0V8_BETSP) HSP 1 Score: 53.9 bits (128), Expect = 5.650e-6 Identity = 35/89 (39.33%), Postives = 45/89 (50.56%), Query Frame = 1 Query: 40 IHLAAMLGHEKTLSSLLMMGADVNAVDIYKISPLPLTACKGRLGAVKVLLEAGADVRFKGIDGWPLFFRLAMHEFVDVVVKELMEYGVD 306 +H A LG E + LL GAD NA DI K +PL L A G L V+ LL+ GA V + G LF A ++ L+E+G D Sbjct: 187 LHECAFLGLENFVHLLLASGADPNACDIKKKTPLALAAQNGHLNVVEALLQKGAHVWCESESGTVLFEAAASGN--PDIISLLLEHGAD 273 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13373.2110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13373.2110.1 >prot_H-paniculata_contig13373.2110.1 ID=prot_H-paniculata_contig13373.2110.1|Name=mRNA_H-paniculata_contig13373.2110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp PPVDCEIEDDQAPIHLAAMLGHEKTLSSLLMMGADVNAVDIYKISPLPLTback to top mRNA from alignment at H-paniculata_contig13373:5286..5636- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13373.2110.1 ID=mRNA_H-paniculata_contig13373.2110.1|Name=mRNA_H-paniculata_contig13373.2110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=351bp|location=Sequence derived from alignment at H-paniculata_contig13373:5286..5636- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13373:5286..5636- >mRNA_H-paniculata_contig13373.2110.1 ID=mRNA_H-paniculata_contig13373.2110.1|Name=mRNA_H-paniculata_contig13373.2110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=702bp|location=Sequence derived from alignment at H-paniculata_contig13373:5286..5636- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |