mRNA_H-paniculata_contig13354.2098.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13354.2098.1 vs. uniprot
Match: D7G289_ECTSI (zf-LYAR domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G289_ECTSI) HSP 1 Score: 173 bits (438), Expect = 3.620e-50 Identity = 85/120 (70.83%), Postives = 99/120 (82.50%), Query Frame = 1 Query: 1 FLQHTSCLSEDQKYQGALFKAPKTKVKNRGVNEIWTDAVMRAAEAAAKGTAPKAISGHLVRMGDLGNVPRQEKKFKNFAKNSLRVFDDGAVAKLWEYLDGVKNDITKEEQASSDAVAAAA 360 F HTSC+SEDQKYQGALFKAPK K KNRGVNEIW D+V+ AA A+ G APK + HLVRMGDLGNVPRQEKKFKNF KNSLRVFD+ +V+KLW Y+DGVKND+T +E+ ++ AAAA Sbjct: 105 FRAHTSCVSEDQKYQGALFKAPKAKQKNRGVNEIWADSVLLAASNASSGVAPKPLCAHLVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVSKLWAYVDGVKNDLTAKEKEATATPAAAA 224
BLAST of mRNA_H-paniculata_contig13354.2098.1 vs. uniprot
Match: A0A7S4DDA0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDA0_HETAK) HSP 1 Score: 102 bits (253), Expect = 1.090e-23 Identity = 50/110 (45.45%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 1 FLQHTSCLSEDQKYQGALFKAPKTKVKNRGVNEIWTDAVMRAAEAAAKGTAPKAISGHLVRMGDLGNVPRQEKKFKNFAKNSLRVFDDGAVAKLWEYLDGVKNDITKEEQ 330 + QH +C+SE +KYQG L++APK K + E W + V+ +A A P + +L RM DLGNVPRQ KKF NF KNSL + D VA+LW++LDG++ + EQ Sbjct: 45 YKQHMTCISEAEKYQGNLYQAPKKKAGKQNPQEAWMELVVNSANQPA----PAGLKSYLQRMADLGNVPRQRKKFGNFVKNSLALRSDAVVAQLWDHLDGLREAAKQREQ 150
BLAST of mRNA_H-paniculata_contig13354.2098.1 vs. uniprot
Match: A0A835Z9A3_9STRA (zf-LYAR domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A3_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 6.060e-21 Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 1 Query: 1 FLQHTSCLSEDQKYQGALFKAPKTKVKNRGVNEIWTDAVMRAAEAAAKGTAPKAISGHLVRMGDLGNVPRQEKKFKNFAKNSLRVFDDGAVAKLWEYLDGVK 306 + HT+C+SE +KY+ ++K K K + + W D V EAAA P A+ HL RM D GNVPRQEKKF+NF +NSL+++D GA+ +W +L+ ++ Sbjct: 47 YATHTTCISEAEKYEKTVYKGNKGKPVKKNPQDAWMDLVT---EAAASAATPPAVRAHLQRMADFGNVPRQEKKFRNFLQNSLKLWDAGAIDAIWRHLEALR 145
BLAST of mRNA_H-paniculata_contig13354.2098.1 vs. uniprot
Match: A0A7R9UG70_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG70_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.270e-17 Identity = 46/110 (41.82%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 1 FLQHTSCLSEDQKYQGALFKAPKTKVKNRGVNEIWTDAVMRAAEAAAKGTAPKAISGHLVRMGDLGNVPRQEKKFKNFAKNSLRVFDDGAVAKLWEYLDGVKNDITKEEQ 330 + HTSC+SE +KY+ + PKT K +G +E+W + V A++ A AP I G L ++ LGNVPR E+KF+NF NSLR+ D+ V ++W+YL +K+ E+Q Sbjct: 62 YRSHTSCISEAEKYEKSTRAVPKT--KKQGPHEVWMEVVETASKNVAD--APPRIQGWLPKIQSLGNVPRVERKFRNFLGNSLRLRDETIVTEIWQYLSELKSRQKAEKQ 167
BLAST of mRNA_H-paniculata_contig13354.2098.1 vs. uniprot
Match: A0A7S2SQW7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQW7_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.510e-17 Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 1 FLQHTSCLSEDQKYQGALFKAPKT-----KVKNRGVNEIWTDAVMRAAEAAAKGTAPKAISGHLVRMGDLGNVPRQEKKFKNFAKNSLRVFDDGAVAKLWEYL 294 + QHTSC+SE QKY+GAL++ PK K +G EIW + V +AA A AP I + + GNVPR + KF NF KNSLRV + + ++WE+L Sbjct: 45 YRQHTSCISEAQKYEGALYRGPKKGGETGSKKKKGPQEIWMEVVEQAA--AESQQAPANIRSMISNLSGFGNVPRNQNKFCNFVKNSLRVRSEPMIKQIWEFL 145
BLAST of mRNA_H-paniculata_contig13354.2098.1 vs. uniprot
Match: W7TWJ6_9STRA (Zinc finger, C2H2, LYAR-type n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWJ6_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 7.080e-17 Identity = 49/121 (40.50%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 10 HTSCLSEDQKYQGALFKAPKT-----KVKNRGVNEIWTDAVMRAA-EAAAKGTAPKAISGHLVRMGDLGNVPRQEKKFKNFAKNSLRVFDDGAVAKLWEYLDGVKNDITKEEQASSDAVAA 354 HTSC+SE +KY+ +L+K PK K K R E W + + A + + G + HL RM +LGNVPR EKKFKNF NSLR+ +LW+YL G ++ +A S V A Sbjct: 49 HTSCISEAEKYEKSLYKGPKAGNKGGKGKKRNPQEEWMEMIASVACDNSETGGVNSILRRHLSRMAELGNVPRNEKKFKNFLNNSLRINRSNEQDELWKYLKGKMDENKPAAEAPSGQVMA 169
BLAST of mRNA_H-paniculata_contig13354.2098.1 vs. uniprot
Match: A0A7S3HA97_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HA97_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.360e-15 Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 1 FLQHTSCLSEDQKYQGALFKAPKTKVKNRGVNEIWTDAVMRAAEAAAKGTAPKAISGHLVRMGDLGNVPRQEKKFKNFAKNSLRVFDDGAVAKLWEYLD 297 + +H +C+SE +KY+ L+KA K+ + W + A A TAP + +L R+G+L NVPR +KKF NFAKNSLR++ D + LW YLD Sbjct: 45 YAEHITCVSEAEKYEKTLYKAKAVKLNPQ---YAWNAQIETATSKAE--TAPAIVRPYLQRLGELNNVPRNKKKFINFAKNSLRLYSDNVLEALWNYLD 138
BLAST of mRNA_H-paniculata_contig13354.2098.1 vs. uniprot
Match: T2M4U2_HYDVU (Cell growth-regulating nucleolar protein n=3 Tax=Hydra vulgaris TaxID=6087 RepID=T2M4U2_HYDVU) HSP 1 Score: 77.4 bits (189), Expect = 2.940e-14 Identity = 43/111 (38.74%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 1 FLQHTSCLSEDQKYQGALFKAPKTKVKNRGVNEIWTDAVMRAAEAAAKGTAPKAISGHLVRMGDLGNVPRQEKKFKNFAKNSLRVFDDGAVAKLWEYLDG--VKNDITKEE 327 + H SC+SE +KYQG L++A + K + W V A E+ PK + L R+ + NVPR+EKKF+NF KNSLR++D+ +++LW+ G VK T +E Sbjct: 46 YATHNSCISEAEKYQGHLYQASNKENKGENKQKEWIKQVQIATESVVN---PK-LKSLLQRVSEYSNVPRKEKKFQNFCKNSLRIYDELTLSQLWDAFSGATVKESKTLQE 152
BLAST of mRNA_H-paniculata_contig13354.2098.1 vs. uniprot
Match: A0A7S1ADK3_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ADK3_NOCSC) HSP 1 Score: 74.3 bits (181), Expect = 1.400e-13 Identity = 36/96 (37.50%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 7 QHTSCLSEDQKYQGALFKAPKTKVKNRGVNEIWTDAVMRAAEAAAKGTAPKAISGHLVRMGDLGNVPRQEKKFKNFAKNSLRVFDDGAVAKLWEYL 294 +HT+C+SE QKYQG LF A + + K + E W + VM EA +P+ HL ++ N+PR++K F NF KNSL +++D + +W+ + Sbjct: 55 KHTTCISEAQKYQGNLFVAKENQNKGKKKQENWIENVMNKIEAPDTKISPQ-TKAHLTKLLGFSNIPRKQKPFTNFVKNSLNLWNDKQINDIWDVI 149
BLAST of mRNA_H-paniculata_contig13354.2098.1 vs. uniprot
Match: A0A7S1LZS8_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1LZS8_ALECA) HSP 1 Score: 72.0 bits (175), Expect = 1.680e-13 Identity = 35/92 (38.04%), Postives = 55/92 (59.78%), Query Frame = 1 Query: 10 HTSCLSEDQKYQGALFKAPKTKVKNRGVNEIWTDAVMRAAEAAAKGTAPKAISGHLVRMGDLGNVPRQEKKFKNFAKNSLRVFDDGAVAKLW 285 HTSC+SE QKYQG L++ ++ K + + W V R E A +P+ L ++ N+PR++K F NF KNSL+++D+G + +LW Sbjct: 50 HTSCVSEAQKYQGNLYQPKESSNKGQQKQDAWVGNVERFIEDPASKVSPQ-TKALLQKLLGFSNIPRKQKPFANFVKNSLKIWDEGKIGELW 140 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13354.2098.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13354.2098.1 >prot_H-paniculata_contig13354.2098.1 ID=prot_H-paniculata_contig13354.2098.1|Name=mRNA_H-paniculata_contig13354.2098.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp FLQHTSCLSEDQKYQGALFKAPKTKVKNRGVNEIWTDAVMRAAEAAAKGTback to top mRNA from alignment at H-paniculata_contig13354:4996..6950- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13354.2098.1 ID=mRNA_H-paniculata_contig13354.2098.1|Name=mRNA_H-paniculata_contig13354.2098.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1955bp|location=Sequence derived from alignment at H-paniculata_contig13354:4996..6950- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13354:4996..6950- >mRNA_H-paniculata_contig13354.2098.1 ID=mRNA_H-paniculata_contig13354.2098.1|Name=mRNA_H-paniculata_contig13354.2098.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=756bp|location=Sequence derived from alignment at H-paniculata_contig13354:4996..6950- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |