prot_H-paniculata_contig13351.2097.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13351.2097.1
Unique Nameprot_H-paniculata_contig13351.2097.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length193
Homology
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BLAST of mRNA_H-paniculata_contig13351.2097.1 vs. uniprot
Match: D8LB83_ECTSI (WD-40 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB83_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 9.820e-29
Identity = 94/199 (47.24%), Postives = 107/199 (53.77%), Query Frame = 0 
Query:    1 MTDTKYPFREFCAPFTSFILAPDLT-------WQEYCEESYVPFMSVVIDTQAFKYLLETQDLPALRPFHDMLNKARRDASKKGNRHETRDA--GAHSADEAGSTAAFNGPFPMGVAKDDFAPSL--SVVVGNGLDGASRLAAARGGAAVRRSGDGDYAPPAFAIPAPALKSFVLRASAK------DEQEEALNASRGK 182
            M D  Y F E C     F L PD          QEYCEESYVPFMSVVIDT AFKYLLETQD P LRPFHD+L+KARRDA +KG  H            DE  +  AF+GPFP+    D+   S   S        GA+   AARG  A R  G     PPAFAIP+P L+SF             +E+E  L+ASRGK
Sbjct:  860 MADMLYGFTE-CL----FFLHPDRPIFNGARFLQEYCEESYVPFMSVVIDTLAFKYLLETQDTPPLRPFHDLLDKARRDALRKGGDHRKHQMILAPQVPDEPPTAGAFDGPFPVVHGFDEVVVSRPKSSDAPAAAAGAAGTDAARG--AARLVGGTALPPPAFAIPSPPLRSFAQHGGXXXXXXRGEEEEVDLSASRGK 1051
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BLAST of mRNA_H-paniculata_contig13351.2097.1 vs. uniprot
Match: A0A6H5KB05_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB05_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 7.400e-27
Identity = 84/175 (48.00%), Postives = 93/175 (53.14%), Query Frame = 0 
Query:    1 MTDTKYPFREFCAPFTSFILAPDLT-------WQEYCEESYVPFMSVVIDTQAFKYLLETQDLPALRPFHDMLNKARRDASKKGNRHETRDA--GAHSADEAGSTAAFNGPFPMGVAKDDFA---PSLSVVVGNGLDGASRLAAARGGAAVRRSGDGDYAPPAFAIPAPALKSFV 163
            M D  Y F E C     F L PD          QEYCEESYVPFMSVVIDT AFKYLLETQD P LRPFHD+L+KARRDA +KG  H            DE  +  AF+GPFP+    D+     P  S        GA+   AA  G   R  G     PPAFAIP+P L SF 
Sbjct:  898 MADMLYGFTE-CL----FFLHPDRPIFNGARFLQEYCEESYVPFMSVVIDTLAFKYLLETQDTPPLRPFHDLLDKARRDALRKGGDHRKHQMILAPQVPDEPPTAGAFDGPFPVVNGFDEAVVSRPKSSDAPTAAAAGAAGTDAATLGGEARLVGGATLPPPAFAIPSPPLSSFA 1067
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13351.2097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB83_ECTSI9.820e-2947.24WD-40 repeat protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KB05_9PHAE7.400e-2748.00UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13351contigH-paniculata_contig13351:4035..6680 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13351.2097.1mRNA_H-paniculata_contig13351.2097.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13351 4035..6736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13351.2097.1 ID=prot_H-paniculata_contig13351.2097.1|Name=mRNA_H-paniculata_contig13351.2097.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp
MTDTKYPFREFCAPFTSFILAPDLTWQEYCEESYVPFMSVVIDTQAFKYL
LETQDLPALRPFHDMLNKARRDASKKGNRHETRDAGAHSADEAGSTAAFN
GPFPMGVAKDDFAPSLSVVVGNGLDGASRLAAARGGAAVRRSGDGDYAPP
AFAIPAPALKSFVLRASAKDEQEEALNASRGKFDGLPGESDSA
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