mRNA_H-paniculata_contig13347.2093.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13347.2093.1 vs. uniprot
Match: D7G1F6_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F6_ECTSI) HSP 1 Score: 55.8 bits (133), Expect = 5.460e-7 Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 1 Query: 28 QEFDNMKVIELKAELRMRGLMVSGVKSVLIQRLQDYEDGL---RANKDTQNPTVEAATAEGQETEVAGE 225 Q F++M+V+ELK EL+ RGL VSG+K+VLIQRL D+++ L A + PT +++G E++ E Sbjct: 4 QAFEDMRVVELKVELKARGLPVSGLKAVLIQRLHDHDNSLVEKLAQAKDEEPTAAVKSSDGAGAELSPE 72
BLAST of mRNA_H-paniculata_contig13347.2093.1 vs. uniprot
Match: A0A5C6NSK6_9TELE (Myocardin (Fragment) n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6NSK6_9TELE) HSP 1 Score: 54.3 bits (129), Expect = 1.830e-6 Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 1 Query: 4 VPSQNG-VLQEFDNMKVIELKAELRMRGLMVSGVKSVLIQRLQDYEDGLRANKDTQNPTVEAATAEGQE 207 VP + G +L D+M+V+ELK+EL+ RGL VSG K+ L++RL+ Y+D + +T + T T G E Sbjct: 263 VPGKPGNLLPNLDDMRVVELKSELKQRGLTVSGSKNELVERLRSYQDLKKGCGNTSSLTAGGTTGSGAE 331
BLAST of mRNA_H-paniculata_contig13347.2093.1 vs. uniprot
Match: A0A668RGB7_OREAU (SAP domain-containing protein n=31 Tax=Pseudocrenilabrinae TaxID=318546 RepID=A0A668RGB7_OREAU) HSP 1 Score: 52.8 bits (125), Expect = 6.850e-6 Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 1 Query: 37 DNMKVIELKAELRMRGLMVSGVKSVLIQRLQDYEDGLRANKDTQNPTVEAATAEGQE 207 D MKV ELK+EL++R L VSG K+ LI+RL+ Y++ R + T +PT T G E Sbjct: 370 DEMKVAELKSELKLRNLPVSGTKNDLIERLRTYQELSRGSDTTSSPTAGCTTGPGAE 426
BLAST of mRNA_H-paniculata_contig13347.2093.1 vs. uniprot
Match: UPI0008540F4E (MKL/myocardin-like protein 2 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI0008540F4E) HSP 1 Score: 51.6 bits (122), Expect = 1.740e-5 Identity = 31/69 (44.93%), Postives = 39/69 (56.52%), Query Frame = 1 Query: 13 QNGVL--------QEFDNMKVIELKAELRMRGLMVSGVKSVLIQRLQDYEDGLRANKDTQNPTVEAATA 195 QNGV D+MKV ELK EL++RGL VSG K+ LI+RL+ Y+D + N T A TA Sbjct: 378 QNGVQFKKAGPLPSNLDDMKVAELKMELKLRGLPVSGTKTELIERLKPYQDLNNNGVNANNATAVATTA 446
BLAST of mRNA_H-paniculata_contig13347.2093.1 vs. uniprot
Match: A0A484CL68_PERFV (SAP domain-containing protein n=11 Tax=Percidae TaxID=8165 RepID=A0A484CL68_PERFV) HSP 1 Score: 51.6 bits (122), Expect = 1.750e-5 Identity = 28/67 (41.79%), Postives = 39/67 (58.21%), Query Frame = 1 Query: 7 PSQNGVLQEFDNMKVIELKAELRMRGLMVSGVKSVLIQRLQDYEDGLRANKDTQNPTVEAATAEGQE 207 P + D MKV ELK+EL++R L VSG K+ LI+RL+ Y++ + T +PT AT G E Sbjct: 421 PKPTFLPPNLDEMKVAELKSELKLRSLPVSGTKNDLIERLRTYQELNGVSDTTSSPTAGGATGPGAE 487
BLAST of mRNA_H-paniculata_contig13347.2093.1 vs. uniprot
Match: A0A7M4FT48_CROPO (Myocardin related transcription factor B n=6 Tax=Longirostres TaxID=1298654 RepID=A0A7M4FT48_CROPO) HSP 1 Score: 51.2 bits (121), Expect = 2.380e-5 Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 1 Query: 37 DNMKVIELKAELRMRGLMVSGVKSVLIQRLQDYEDGLRANKDTQNPTVEAATAEGQET 210 D++KV ELK EL++RGL VSG K+ LI+RL+ Y+D L N T + T AT+ G+ T Sbjct: 408 DDLKVAELKMELKLRGLPVSGTKTDLIERLKPYQD-LNNNGVTTSNTTTTATSTGEVT 464
BLAST of mRNA_H-paniculata_contig13347.2093.1 vs. uniprot
Match: UPI00097D00E6 (MKL/myocardin-like protein 2 isoform X1 n=6 Tax=Pleuronectoidei TaxID=30942 RepID=UPI00097D00E6) HSP 1 Score: 51.2 bits (121), Expect = 2.380e-5 Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 19 GVLQ-EFDNMKVIELKAELRMRGLMVSGVKSVLIQRLQDYEDGLRANKDTQNPTVEAATA 195 GVL + MKV ELK EL++RGL VSG K+ LI+RL+ ++D LR + T P T+ Sbjct: 403 GVLPANLEEMKVAELKLELKLRGLPVSGTKTDLIERLKPFQDNLRTSAPTSIPQPTTTTS 462
BLAST of mRNA_H-paniculata_contig13347.2093.1 vs. uniprot
Match: A0A151N1K1_ALLMI (MKL/myocardin-like protein 2 isoform A n=9 Tax=Crocodylia TaxID=1294634 RepID=A0A151N1K1_ALLMI) HSP 1 Score: 51.2 bits (121), Expect = 2.380e-5 Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 1 Query: 37 DNMKVIELKAELRMRGLMVSGVKSVLIQRLQDYEDGLRANKDTQNPTVEAATAEGQET 210 D++KV ELK EL++RGL VSG K+ LI+RL+ Y+D L N T + T AT+ G+ T Sbjct: 411 DDLKVAELKMELKLRGLPVSGTKTDLIERLKPYQD-LNNNGVTTSNTTTTATSTGEVT 467
BLAST of mRNA_H-paniculata_contig13347.2093.1 vs. uniprot
Match: A0A6P8SYM2_GEOSA (myocardin-related transcription factor B isoform X2 n=1 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8SYM2_GEOSA) HSP 1 Score: 51.2 bits (121), Expect = 2.380e-5 Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 1 Query: 37 DNMKVIELKAELRMRGLMVSGVKSVLIQRLQDYEDGLRANKDTQNPTVEAATAEGQETEVAGE 225 D+MKV ELK EL++RGL VSG K+ LI+RL+ Y+D + T N T A TA T AGE Sbjct: 401 DDMKVAELKMELKLRGLPVSGTKTDLIERLKPYQDCHNNSATTGNAT--ATTASTVATSCAGE 461
BLAST of mRNA_H-paniculata_contig13347.2093.1 vs. uniprot
Match: UPI00155E5BAE (myocardin-related transcription factor A-like isoform X1 n=2 Tax=Etheostoma cragini TaxID=417921 RepID=UPI00155E5BAE) HSP 1 Score: 51.2 bits (121), Expect = 2.390e-5 Identity = 30/70 (42.86%), Postives = 40/70 (57.14%), Query Frame = 1 Query: 37 DNMKVIELKAELRMRGLMVSGVKSVLIQRLQDYEDGLRANKDTQNPTVEAATAEGQETEVAGEQHPAKIT 246 D MKV ELK+EL++R L VSG K LI+RL+ Y++ + T +PT AT G E + A IT Sbjct: 406 DEMKVAELKSELKLRSLPVSGTKIDLIERLRTYQELNGGSDTTSSPTAGGATGPGAEGTAKSSKSAASIT 475 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13347.2093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13347.2093.1 >prot_H-paniculata_contig13347.2093.1 ID=prot_H-paniculata_contig13347.2093.1|Name=mRNA_H-paniculata_contig13347.2093.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=94bp HVPSQNGVLQEFDNMKVIELKAELRMRGLMVSGVKSVLIQRLQDYEDGLRback to top mRNA from alignment at H-paniculata_contig13347:396..677+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13347.2093.1 ID=mRNA_H-paniculata_contig13347.2093.1|Name=mRNA_H-paniculata_contig13347.2093.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=282bp|location=Sequence derived from alignment at H-paniculata_contig13347:396..677+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13347:396..677+ >mRNA_H-paniculata_contig13347.2093.1 ID=mRNA_H-paniculata_contig13347.2093.1|Name=mRNA_H-paniculata_contig13347.2093.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=564bp|location=Sequence derived from alignment at H-paniculata_contig13347:396..677+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |