mRNA_H-paniculata_contig13345.2092.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13345.2092.1
Unique NamemRNA_H-paniculata_contig13345.2092.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig13345.2092.1 vs. uniprot
Match: A0A6H5JRK8_9PHAE (Origin recognition complex subunit 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK8_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 5.590e-83
Identity = 135/178 (75.84%), Postives = 150/178 (84.27%), Query Frame = 1 
Query:    1 GGLGDALFIAGTPGTGKTAIAMEVMRLLREQQARGGLPEFKLVTLNGMRLVRPHQAYTELWMALEGEMLSPKRALSKLEHYFSDRDPNRQFVVLLVDELDYMTTPKQTVLYNLFEWPSGVNARLVMMGVANTMDLPERCPPRISSRITSRLMFPAYNKNQLVVILQQRLVEANALAGK 534
            GGLG+ALF+AG PGTGKTA A EV+R+L+ QQARG LP FKLV LNGMRL  PHQAY +LWMAL GEMLSPKRAL KLE YFS  DP+R+FVVLLVDELDYMTT KQTVLYNLFEWPS  NARLV++G+ANT+DLPERC PR+SSR+TSRL F  Y K QL  ILQ RLVEANA+ GK
Sbjct:  218 GGLGNALFVAGMPGTGKTATAHEVVRILKGQQARGLLPRFKLVELNGMRLTEPHQAYPQLWMALSGEMLSPKRALYKLEKYFSRGDPSREFVVLLVDELDYMTTRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRVTSRLTFGPYTKLQLAEILQARLVEANAIGGK 395
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BLAST of mRNA_H-paniculata_contig13345.2092.1 vs. uniprot
Match: D7FYY4_ECTSI (Origin recognition complex subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY4_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 1.400e-80
Identity = 135/178 (75.84%), Postives = 150/178 (84.27%), Query Frame = 1 
Query:    1 GGLGDALFIAGTPGTGKTAIAMEVMRLLREQQARGGLPEFKLVTLNGMRLVRPHQAYTELWMALEGEMLSPKRALSKLEHYFSDRDPNRQFVVLLVDELDYMTTPKQTVLYNLFEWPSGVNARLVMMGVANTMDLPERCPPRISSRITSRLMFPAYNKNQLVVILQQRLVEANALAGK 534
            GGLG+ALF+AG PGTGKTA A EV+R+L+ QQARG LP FKLV LNGMRL  PHQAY +LWMAL GEMLSPKRAL KLE YFS  DP+R+FVVLLVDELDYMTT KQTVLYNLFEWPS  NARLV++G+ANT+DLPERC PR+SSR+TSRL F  Y K QL  ILQ RLVEANA+ GK
Sbjct:  503 GGLGNALFVAGMPGTGKTATAHEVVRILKGQQARGLLPRFKLVELNGMRLTEPHQAYPQLWMALSGEMLSPKRALYKLEKYFSRGDPSREFVVLLVDELDYMTTRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRVTSRLTFGPYTKLQLAEILQARLVEANAIGGK 680
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BLAST of mRNA_H-paniculata_contig13345.2092.1 vs. uniprot
Match: A0A482RR89_9ARCH (AAA family ATPase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RR89_9ARCH)

HSP 1 Score: 164 bits (416), Expect = 1.530e-45
Identity = 84/177 (47.46%), Postives = 118/177 (66.67%), Query Frame = 1 
Query:    1 GGLGDALFIAGTPGTGKTAIAMEVMRLLREQQARGGLPEFKLVTLNGMRLVRPHQAYTELWMALEGEMLSPKRALSKLEHYFSDRDPNRQFVVLLVDELDYMTTPKQTVLYNLFEWPSGVNARLVMMGVANTMDLPERCPPRISSRITS-RLMFPAYNKNQLVVILQQRLVEANALA 528
            GGLG AL+I+G PGTGKT++ ME++R L  +   G LP FK V LN M+L  PH AY++L   L G   +  RA S L+ +F   +  R   VLLVDELD++ T +QTV+YNLF WP   N++L+++ +ANTMDLPER  P+++SR++  RL+F  Y + QLV I+  RL ++   A
Sbjct:   78 GGLGSALYISGMPGTGKTSLVMEIIRTLSAEAEAGTLPAFKFVELNAMKLATPHDAYSQLASELLGVYAAATRAASLLDTHFRTANKQRLATVLLVDELDFLMTRQQTVIYNLFNWPQYANSKLIIVSLANTMDLPERLLPKVASRLSPLRLVFQPYTREQLVTIMAARLTDSKTQA 254
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BLAST of mRNA_H-paniculata_contig13345.2092.1 vs. uniprot
Match: A0A2R5GRB9_9STRA (Origin recognition complex subunit 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRB9_9STRA)

HSP 1 Score: 164 bits (415), Expect = 6.060e-44
Identity = 93/182 (51.10%), Postives = 118/182 (64.84%), Query Frame = 1 
Query:    1 GGLGDALFIAGTPGTGKTAIAMEVMRLLREQQARGGLPEFKLVTLNGMRLVRPHQAYTELWMALEGEMLSPKRALSKLEHYF------------SDRDPNRQFVVLLVDELDYMTTPKQTVLYNLFEWPSGVNARLVMMGVANTMDLPERCPPRISSRI-TSRLMFPAYNKNQLVVILQQRL 507
            GG G AL+I+G PGTGKTA   EV+R L+ +   G L +F  V +NGMRL  P+QAYTEL  AL G+  S  RA   LE  F            S    + +  VLLVDELDYM T KQTVLYNLF+WP+  N  LV++G+ANTMDLPER  PRI+SR+  SR++F +Y ++QL  I++ RL
Sbjct:  311 GGAGGALYISGMPGTGKTATVHEVVRSLQREARNGSLADFDFVEINGMRLPHPYQAYTELHKALTGQNASQTRAAQLLEQRFAGSSTRASSAQASSTTDSPRTCVLLVDELDYMVTRKQTVLYNLFDWPTRPNVHLVVVGIANTMDLPERLLPRIASRLGMSRVVFQSYTRDQLERIIRARL 492
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BLAST of mRNA_H-paniculata_contig13345.2092.1 vs. uniprot
Match: A0A1Y1W9H7_9FUNG (Origin recognition complex subunit 1 n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W9H7_9FUNG)

HSP 1 Score: 156 bits (394), Expect = 7.410e-43
Identity = 76/165 (46.06%), Postives = 110/165 (66.67%), Query Frame = 1 
Query:   19 LFIAGTPGTGKTAIAMEVMRLLREQQARGGLPEFKLVTLNGMRLVRPHQAYTELWMALEGEMLSPKRALSKLEHYFSDRDPNRQFVVLLVDELDYMTTPKQTVLYNLFEWPSGVNARLVMMGVANTMDLPERC-PPRISSRI-TSRLMFPAYNKNQLVVILQQRL 507
            ++I+G PGTGKTA   E +R L+E    G LP+F+ V LNGM++  P QAYT+LW A+ G  ++PK A   LE +FS   P R   V+L+DELD + T  Q+V+YN F+WP   +A+L+++ +ANTMDLPER    ++SSR+  +R+ F  Y+  QL  I++ RL
Sbjct:   44 MYISGVPGTGKTATVREAIRTLQESAEEGDLPQFQFVELNGMKMTEPQQAYTQLWQAITGSKVTPKHAAQLLESHFSTPSPRRHAYVVLMDELDLLVTKSQSVMYNFFDWPHRAHAKLIVIAIANTMDLPERMLHHKVSSRLGLTRINFQPYSHTQLFTIVESRL 208
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BLAST of mRNA_H-paniculata_contig13345.2092.1 vs. uniprot
Match: A0A010RVV9_9PEZI (Origin recognition complex subunit 1 n=5 Tax=Colletotrichum acutatum species complex TaxID=2707335 RepID=A0A010RVV9_9PEZI)

HSP 1 Score: 160 bits (405), Expect = 1.930e-42
Identity = 88/183 (48.09%), Postives = 119/183 (65.03%), Query Frame = 1 
Query:    4 GLGDALFIAGTPGTGKTAIAMEVMRLLREQQARGGLPEFKLVTLNGMRLVRPHQAYTELWMALEGEMLSPKRALSKLEHYFSDRDPNRQFVVLLVDELDYMTTPKQTVLYNLFEWPSGVNARLVMMGVANTMDLPERC-PPRISSRI-TSRLMFPAYNKNQLVVILQQRL-------VEANAL 525
            G G  ++IAGTPGTGKTA   EV+  L +      L +F  V +NGM++  PHQ+YT LW AL+GE +SP +A+  LE  FS+  P R   V+L+DELD + T  Q+V+YN F WP   ++RL+++ VANTMDLPER    +ISSRI  +R+ FP YN  QL+ I+Q RL       VEA+A+
Sbjct:  350 GSGSCIYIAGTPGTGKTATVREVISRLEDSVTADELDDFIFVEINGMKITDPHQSYTLLWEALKGERVSPTQAIDLLEREFSNPSPRRTPCVVLMDELDQLVTKNQSVMYNFFNWPGLRHSRLIVLAVANTMDLPERTLSNKISSRIGLTRITFPGYNHEQLMKIIQSRLECVPGSIVEADAI 532
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BLAST of mRNA_H-paniculata_contig13345.2092.1 vs. uniprot
Match: W7LI54_GIBM7 (Origin recognition complex subunit 1 n=71 Tax=Fusarium TaxID=5506 RepID=W7LI54_GIBM7)

HSP 1 Score: 159 bits (401), Expect = 6.130e-42
Identity = 84/170 (49.41%), Postives = 113/170 (66.47%), Query Frame = 1 
Query:    4 GLGDALFIAGTPGTGKTAIAMEVMRLLREQQARGGLPEFKLVTLNGMRLVRPHQAYTELWMALEGEMLSPKRALSKLEHYFSDRDPNRQFVVLLVDELDYMTTPKQTVLYNLFEWPSGVNARLVMMGVANTMDLPERC-PPRISSRI-TSRLMFPAYNKNQLVVILQQRL 507
            G G+ ++I+GTPGTGKTA   EV+  L E      L +F  V +NGM++  PHQ+YT LW AL+GE  SP +AL  LE  FS+  P R   V+L+DELD + T  Q V+YN F WP+  ++RL+++ VANTMDLPER    +ISSR+  +R+ FP YN  QL+ I+Q RL
Sbjct:  338 GTGNCIYISGTPGTGKTATVREVVSRLEEAVGSDELDDFIFVEINGMKITDPHQSYTLLWEALKGERASPAQALDHLEREFSNPSPRRIPCVVLMDELDQLVTKNQAVMYNFFNWPTLRHSRLIVLAVANTMDLPERTLSNKISSRLGLTRITFPGYNHEQLMKIIQSRL 507
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BLAST of mRNA_H-paniculata_contig13345.2092.1 vs. uniprot
Match: A0A2G5BFX7_COERN (Origin recognition complex subunit 1 (Fragment) n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BFX7_COERN)

HSP 1 Score: 150 bits (380), Expect = 6.720e-42
Identity = 75/165 (45.45%), Postives = 109/165 (66.06%), Query Frame = 1 
Query:   19 LFIAGTPGTGKTAIAMEVMRLLREQQARGGLPEFKLVTLNGMRLVRPHQAYTELWMALEGEMLSPKRALSKLEHYFSDRDPNRQFVVLLVDELDYMTTPKQTVLYNLFEWPSGVNARLVMMGVANTMDLPERC-PPRISSRI-TSRLMFPAYNKNQLVVILQQRL 507
            ++I+G PGTGKTA   E +R L E    G LP+F+ + LNGM++  P+QAY++LW A+ G   + K A   LE +FS   P R   V+LVDELD + T  Q+++YN F+WP   +ARL+++ +ANTMDLPER    ++SSR+  +R+ F  Y+  QL+ I+Q RL
Sbjct:    3 MYISGVPGTGKTATVHEAIRALSENVEEGELPDFQFIELNGMKMTEPNQAYSQLWQAITGNRATTKHAAQLLEKHFSTPSPRRHTHVVLVDELDLLVTKTQSIMYNFFDWPHRPHARLIVIAIANTMDLPERMLHHKVSSRLGLTRINFQPYSHQQLMTIVQSRL 167
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BLAST of mRNA_H-paniculata_contig13345.2092.1 vs. uniprot
Match: K3VR97_FUSPC (Origin recognition complex subunit 1 n=11 Tax=Fusarium TaxID=5506 RepID=K3VR97_FUSPC)

HSP 1 Score: 158 bits (400), Expect = 8.440e-42
Identity = 84/170 (49.41%), Postives = 113/170 (66.47%), Query Frame = 1 
Query:    4 GLGDALFIAGTPGTGKTAIAMEVMRLLREQQARGGLPEFKLVTLNGMRLVRPHQAYTELWMALEGEMLSPKRALSKLEHYFSDRDPNRQFVVLLVDELDYMTTPKQTVLYNLFEWPSGVNARLVMMGVANTMDLPERC-PPRISSRI-TSRLMFPAYNKNQLVVILQQRL 507
            G G+ ++I+GTPGTGKTA   EV+  L E      L +F  V +NGM++  PHQ+YT LW AL+GE  SP +AL  LE  FS+  P R   V+L+DELD + T  Q V+YN F WP+  ++RL+++ VANTMDLPER    +ISSR+  +R+ FP YN  QL+ I+Q RL
Sbjct:  338 GTGNCIYISGTPGTGKTATVREVVSRLEESVGSDELDDFIFVEINGMKITDPHQSYTLLWEALKGERASPAQALDLLEREFSNPSPRRIPCVVLMDELDQLVTKNQAVMYNFFNWPTLRHSRLIVLAVANTMDLPERTLSNKISSRLGLTRITFPGYNHEQLMRIIQSRL 507
[Close]
BLAST of mRNA_H-paniculata_contig13345.2092.1 vs. uniprot
Match: E9G6A6_DAPPU (AAA domain-containing protein n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9G6A6_DAPPU)

HSP 1 Score: 154 bits (389), Expect = 1.170e-41
Identity = 80/170 (47.06%), Postives = 109/170 (64.12%), Query Frame = 1 
Query:    4 GLGDALFIAGTPGTGKTAIAMEVMRLLREQQARGGLPEFKLVTLNGMRLVRPHQAYTELWMALEGEMLSPKRALSKLEHYFSDRDPNRQFVVLLVDELDYMTTPKQTVLYNLFEWPSGVNARLVMMGVANTMDLPERC-PPRISSRI-TSRLMFPAYNKNQLVVILQQRL 507
            G+G  ++I+G PGTGKTA   EV+R+LRE Q  G LP+FKL+ +NGM+L  P Q Y ++W  L G  ++  +A   L   FS   P  +  VL+VDELD + T +Q VLYN+FEWP+   A+L ++ +ANTMDLPER    R+SSR+  +RL F  Y   QL  I+  RL
Sbjct:   90 GIGGCMYISGVPGTGKTATVNEVIRMLRESQTEGDLPDFKLIEVNGMKLTAPQQIYVQIWDQLTGSKVTADKAAKLLHAKFSTNGPRHRPTVLIVDELDLLWTRQQDVLYNIFEWPNRPKAQLTVLAIANTMDLPERLLMNRVSSRMGLTRLTFQPYKVKQLQTIISSRL 259
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13345.2092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRK8_9PHAE5.590e-8375.84Origin recognition complex subunit 1 n=1 Tax=Ectoc... [more]
D7FYY4_ECTSI1.400e-8075.84Origin recognition complex subunit 1 n=1 Tax=Ectoc... [more]
A0A482RR89_9ARCH1.530e-4547.46AAA family ATPase (Fragment) n=1 Tax=archaeon TaxI... [more]
A0A2R5GRB9_9STRA6.060e-4451.10Origin recognition complex subunit 1 n=1 Tax=Honda... [more]
A0A1Y1W9H7_9FUNG7.410e-4346.06Origin recognition complex subunit 1 n=1 Tax=Linde... [more]
A0A010RVV9_9PEZI1.930e-4248.09Origin recognition complex subunit 1 n=5 Tax=Colle... [more]
W7LI54_GIBM76.130e-4249.41Origin recognition complex subunit 1 n=71 Tax=Fusa... [more]
A0A2G5BFX7_COERN6.720e-4245.45Origin recognition complex subunit 1 (Fragment) n=... [more]
K3VR97_FUSPC8.440e-4249.41Origin recognition complex subunit 1 n=11 Tax=Fusa... [more]
E9G6A6_DAPPU1.170e-4147.06AAA domain-containing protein n=1 Tax=Daphnia pule... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13345contigH-paniculata_contig13345:2253..6846 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score266.2
Seed ortholog evalue1.2e-68
Seed eggNOG ortholog2880.D7FYY4
Preferred nameORC1
KEGG koko:K02603,ko:K11122,ko:K18260
KEGG Pathwayko04110,ko04111,ko04113,map04110,map04111,map04113
KEGG ModuleM00284
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000076,GO:0000082,GO:0000083,GO:0000166,GO:0000228,GO:0000278,GO:0000726,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000792,GO:0000808,GO:0000956,GO:0001301,GO:0001302,GO:0001304,GO:0001308,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003688,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005656,GO:0005657,GO:0005664,GO:0005677,GO:0005694,GO:0005720,GO:0005724,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006267,GO:0006270,GO:0006277,GO:0006281,GO:0006302,GO:0006303,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006342,GO:0006348,GO:0006355,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007093,GO:0007346,GO:0007568,GO:0007569,GO:0008144,GO:0008150,GO:0008152,GO:0008283,GO:0008284,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010389,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0010948,GO:0010972,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017053,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022402,GO:0022607,GO:0030466,GO:0030554,GO:0031261,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031491,GO:0031493,GO:0031497,GO:0031503,GO:0031507,GO:0031570,GO:0031933,GO:0031935,GO:0031936,GO:0031974,GO:0031981,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033260,GO:0033314,GO:0033554,GO:0034397,GO:0034398,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0036387,GO:0036388,GO:0040029,GO:0042127,GO:0042393,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043596,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044774,GO:0044786,GO:0044818,GO:0044843,GO:0044877,GO:0045786,GO:0045787,GO:0045814,GO:0045815,GO:0045892,GO:0045893,GO:0045930,GO:0045934,GO:0045935,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048660,GO:0048661,GO:0048869,GO:0050000,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051640,GO:0051641,GO:0051716,GO:0051726,GO:0060255,GO:0060968,GO:0060969,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070316,GO:0070318,GO:0070481,GO:0070727,GO:0070828,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0071897,GO:0071944,GO:0080090,GO:0090068,GO:0090304,GO:0090568,GO:0097159,GO:0097367,GO:0097695,GO:0098687,GO:1901265,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902275,GO:1902299,GO:1902679,GO:1902680,GO:1902749,GO:1902750,GO:1902969,GO:1903047,GO:1903506,GO:1903507,GO:1903508,GO:1905268,GO:1990837,GO:2000112,GO:2000113,GO:2001141,GO:2001251
EggNOG free text desc.DNA replication
EggNOG OGsCOG1474@1,KOG1514@2759
COG Functional cat.LO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032,ko03036,ko04147
Exons5
Model size555
Cds size555
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13345.2092.1prot_H-paniculata_contig13345.2092.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13345 2253..6846 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929057.7649832-CDS-H-paniculata_contig13345:2252..23271622929057.7649832-CDS-H-paniculata_contig13345:2252..2327Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13345 2253..2327 -
1691480715.050728-CDS-H-paniculata_contig13345:2252..23271691480715.050728-CDS-H-paniculata_contig13345:2252..2327Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13345 2253..2327 -
1622929057.776413-CDS-H-paniculata_contig13345:3666..38401622929057.776413-CDS-H-paniculata_contig13345:3666..3840Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13345 3667..3840 -
1691480715.0632744-CDS-H-paniculata_contig13345:3666..38401691480715.0632744-CDS-H-paniculata_contig13345:3666..3840Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13345 3667..3840 -
1622929057.7865405-CDS-H-paniculata_contig13345:4445..45861622929057.7865405-CDS-H-paniculata_contig13345:4445..4586Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13345 4446..4586 -
1691480715.070855-CDS-H-paniculata_contig13345:4445..45861691480715.070855-CDS-H-paniculata_contig13345:4445..4586Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13345 4446..4586 -
1622929057.8003573-CDS-H-paniculata_contig13345:5516..56121622929057.8003573-CDS-H-paniculata_contig13345:5516..5612Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13345 5517..5612 -
1691480715.0783582-CDS-H-paniculata_contig13345:5516..56121691480715.0783582-CDS-H-paniculata_contig13345:5516..5612Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13345 5517..5612 -
1622929057.8154867-CDS-H-paniculata_contig13345:6777..68461622929057.8154867-CDS-H-paniculata_contig13345:6777..6846Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13345 6778..6846 -
1691480715.0864604-CDS-H-paniculata_contig13345:6777..68461691480715.0864604-CDS-H-paniculata_contig13345:6777..6846Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13345 6778..6846 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13345.2092.1

>prot_H-paniculata_contig13345.2092.1 ID=prot_H-paniculata_contig13345.2092.1|Name=mRNA_H-paniculata_contig13345.2092.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp
GGLGDALFIAGTPGTGKTAIAMEVMRLLREQQARGGLPEFKLVTLNGMRL
VRPHQAYTELWMALEGEMLSPKRALSKLEHYFSDRDPNRQFVVLLVDELD
YMTTPKQTVLYNLFEWPSGVNARLVMMGVANTMDLPERCPPRISSRITSR
LMFPAYNKNQLVVILQQRLVEANALAGKQQQQQL*
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mRNA from alignment at H-paniculata_contig13345:2253..6846-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13345.2092.1 ID=mRNA_H-paniculata_contig13345.2092.1|Name=mRNA_H-paniculata_contig13345.2092.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4594bp|location=Sequence derived from alignment at H-paniculata_contig13345:2253..6846- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCGGATTGGGGGACGCGCTGTTCATTGCTGGCACGCCGGGCACGGGAAA
GACAGCCATAGCTATGGAGGTGACAAAGACACGATGTACCTATACATGTA
CAAAAAGAAAAATGTGTTTTGTTTTTCTCGAGCTCAAATTTAAATTTCAC
TTGCACCTGTTCGAAAGATTTAGAGCTCTCGCTGTTATGAACGCAATCGA
TTTCGTTTGGGTATCTTCCAATCTTCGCGGCAGGGCAGGGAGTGATTTTT
GCGTGTTTAGAAAAATCGAAATGGATACTTGAAGGGGAAAAGGCGACGTC
GAGAGCATAACAGATATACAAATATATATAGAGAGATCCACCTATCTCCA
CCTACAAAGCGGAGAACTCTGTGGCCACACGACTGGCTTTTTAGCTAGCT
CCGCGGAAAGTTTGAAAATGCCTTTTTTTCTCTTTTTTTTTGATGCGCGA
CGTTGCCTTGCTGCTGACATCAACCGCAGTGAGTCCCTGGGTCGAGGGCA
AGTACGAACTCCACGGGCGTAGCTAGCCGTGGCTTTAGTACTCGTGCACA
AAAAAGACAAGAAGTTTCAACTTGAGACTAACACCTGTGTAGAGCTATTC
GCAAGGAGAACGTGATAAAGAGCGTGCCGCGTGGAGTGTCATCAACGTGT
CTTGGAGAGGCGTTTAGCCGAGCATTAAACCCAGAATTCAGTATTCTGGG
CATGTCTGCCCTGATGTTAATAGTGGCGATGGCATGTGTACATTGAATGC
ACAAGAACTATGGCGTTTTTGGCAAAACATCGATATACTGGTCTGACGCG
TGATCTCTATAGAGTTGGTTGTATTTCCAAACGTGAACACTATCCAAACG
GCCAATTATAGCGTCAACTCGTGCAGTATTGCAAGTTGACATGGCAGCGG
TGTTGTTTTCAGCCGGTCATCTCAAATCAAATATTTCACGTATATTATCT
TGTCATAAATCGTATCAGGGGTATATGATGTATCGTAATTTGTATCGACG
CCGATCCATAACCCTGTTTATCAAGTCACTCTTGTGAGGATGCGCAGCCT
GGGACAGCGAACAACATCGTGGAGAGATATCGTTCTGTTCGGCGTTGCAG
GGATTCGAGGTGAATGCATCCTCTCTCGACGATGCCTTGTGCTCTCACAA
GTCCCCCGCCTCCCCTCTCCCCCTCCATGTATCTCTGCGGCTTGTCCAAA
CCTGAACTGATTGAACGACTGACGCATTGGCCAGGTGATGCGGCTCCTAA
GGGAGCAGCAGGCGCGGGGTGGGTTGCCAGAGTTCAAATTGGTTACGCTC
AACGGAATGCGACTCGTCAGACCGCATCAGGTAGGTCGTGTTGTGTTGTG
TGTTTTTCCACGTGTTGTGATGTGGTGTGGTATTTTGAATATGGTTAACG
ACAATTGACACCTTTCAGATTTGCTCTCTTTTGTTATGTATTAAAATACA
ATACAACAGTAATGTAGTAGTGTCGTAACTTAACAAGTCTTGGCTCCCCA
TTGGGGGCCACGCGATGCTGACGCCACCACGTACCTCACTTCAACGTCTT
TTTTTTCCCCCCATCACAGCACCTGTGTACAGGTATTTTGCAGTAAATAT
TTGAAAATACTGTGTACAGGGCACAAGGGCAGTATGTTCATACCTGACTT
TCGGGGGGTGATTATCGAAGAATCGGGGAGGCGTGCCGAGACGGGTACAG
CATATACGTGTTGCTTTCTCTCCAAATGTTTTTCTTGTACATGAATTTTT
GAAACTCTTTGCCCACGCGCGCCCTTCCGCCTATTATACCGTCTACCAGG
TACGCATTTTTTGGAAATATTATTACCTCCTCCGACAAATACGAATACAT
GCAAATGGTTCTTACACAAGATTTGAGAGTATTCGCGTGAGTTTCAGAAT
GAGTCCATGTACTCTAGGTGCCCCCAGATCATCCCACGACTGCTGATAGT
ACTCGTAAATCGAATGAACAGGGGTGGGTAGTTTATTCTATGTGTTCGCT
CATTCTAAAACAGGCGAATACTTTCATTTTGTTTTTTTCGCAAACCATTT
GTAAGTATTCGTATTTGTCGGGGGGGTGAAATGATTGAGGTAGATGTGAC
AATGAGGGTAACTGTCTTGAACAGATGTTGGGTGATTTTTACCCCCTTTC
TAAGGTGTTGCTAAGGTCGCCACCACATAGAAGATGGATGCTTTTTTCGT
TTCAAGCAAACTTTTGAGCCGGGTTGTTCCTCTTTTTTTCATGTCTTTTT
TTTCCGGCAGGCCTACACCGAACTATGGATGGCCCTCGAGGGGGAGATGC
TGTCGCCCAAGCGGGCTCTGAGCAAGCTAGAGCACTACTTTTCTGATAGA
GATCCTAACCGACAGTTCGTTGTGCTTCTGGTAGACGAGCTGGACTACAT
GGTGACAGTTTTTGTTGTCGTTATTGTTTTAGTTGGAGTGGTTTCGCTTA
CTTCCATTTTTTATTTTTACCTTTTTCTCGCAACTCGAAGATTTTCAGTT
ATTTTCTCCTCTCAATACTGTTTCTTTCACACCTCCACACACACATCGTC
TTGGTGTCATTTGTTCAACGTCCGTGCTGTTTTGTATGGACACCGCACAG
CAATTATTGGCCTACTAAATCCCCCCTCCACCCCTTCAAAGCAAAAAATG
GAAATCAGATGAGATACCGTCGGTAACTCAGTTCCGTGGGCAGAGAGAGA
GGTGACGTGGAAAGTGGATACACATTGGATATACGGTATTCATGTCTCAT
CGTTATCGAAGCTTTTTGTCGTGACCGAACGGTTAGACGTTTGTTTGTTC
AGATACTATCAATTCGTACTTCACTGCTACTGCTACTGCTACTGCTACTA
AATACTAAATAGCGGTTAATCGTAGAACCATGCAAAAATGCATCGCTTAT
CTCGTCACCCACGTCATCCTCTCCCCCCAAGAAACAAGAAACATACGTTG
CGCCGACTAAAGGCTTGCCATGCGATGCAATACAATATCTGTGTTTTGTT
ATGCAGACGACACCGAAGCAAACGGTGCTGTACAACCTGTTCGAGTGGCC
GTCAGGGGTAAATGCTCGCCTCGTCATGATGGGCGTCGCCAATACCATGG
ATCTCCCCGAGAGGTGTCCGCCTCGCATCAGCAGCCGAATAACCTCCAGG
CTCATGTTCCCCGCATACAACAAAAATCAGGTGATGGATGCTAATTTAGA
GTGGGTGGGTATACCCCGATTGAAGATGGGGGTGTGTATGTGTGACCAGC
CGCGCAAAGGACGTATATTTAGTCTGTTGAATCCCGATTTACCTTGTTGG
GGCTAGAGCTTCCTTATTGTATTTGAATAATACTAGAGTGTTCCCCAAGC
CCAGTTGATCTACCTAATAATATAGGTCTGCCTTCAGTATGACCGCCTTG
TATCCTGCTTGGCACTGAGTCTCTTACCGTTGACGATTTGGTGCTGAAGA
TTAACGATACGGTCTGTTCATCGTTGCCCTCAAGCTTGTCAACAGACACG
ACGAATCGAGTTTTCCGTCGGGGAATGACTTCCAGCCAACGTCCCTGGCG
TCAGCCAGTCGATGCCCGTGCTCAAGCATTCTTGCGTGCTCCTTGGTGAT
GCTCCACAATCAGTCCCAGTGGAGAAGTTTTATCTGCACCATCTGTGTCC
AAAACTGTCTATATACAATGATGGATCTGTCCGATTTTATCCAGGCATAT
CCGGCCTACGATCAGTGTTGCATCTGTGTGTATGCGAACTTTTTCCAGTT
TTTATGTGAATCCACTATACATCGTAGGAAAACAGGAAAATGGCACGCTT
TACGTATGCTTTGGGTTTTCGGGGCCAGTGGACATTTATGACAGTTGAAA
TGGTGTCGTTTTTTTTTTTTTTTTTTTTTTTTAAATATTTTCGCCTCACA
CTATTTAGCTAGAGCCGAACGACGGTTACCATGTCCATACCAGCAGTTCC
AATGGCAAGTGAGTCCTTGAATAGGCGAAGTAAAGACAAAAACAAAAAAG
GAGCGATCTACACCTTATCGACAACTACATGTCGTCATAAAAACAAATGT
GTGAGCAAGGCATATTTATGAAAGAGGTTTCGAGCACGTGACAACACTTT
TCGCGCGGGGATGGGCGGATTCAAAAGAAAAATGATCGAAAAAAAATCTC
AACTGTACGGAGGCGTTTTCGAATTTTTAAGAATAGGGGATGAACCGTTC
CGAAAGAGGTTTAATCGGGGTACTCACAGAACTACTCATGATGGTGATAC
TGCACACAGACAACAAACACGGCACAGCAGACCAGAGTGGGGACCTATTC
TGTCGCGAATTACCATCTTTTCATGATCTTGTCTGTCCTTCTGGTTTTCT
GTCACCTTTGTTGTGATCCCTCGATGTGTTCACCACTCGTGCGCGGTGGG
CAGTGCTTCGGGTGCCGTTTGTAGGTGGTGGTGATGGTGATGGCAATATT
ATTTTCTTGTAACGTTCGTTGTTTTTAATTCAGTGCCTTTTTTTTTTTTT
TTTCTATTCTCTGTCGCAGCTAGTGGTGATCTTGCAACAGAGACTGGTGG
AGGCCAACGCCCTGGCAGGAAAGCAGCAGCAACAACAGCTGTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig13345:2253..6846-

>mRNA_H-paniculata_contig13345.2092.1 ID=mRNA_H-paniculata_contig13345.2092.1|Name=mRNA_H-paniculata_contig13345.2092.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1110bp|location=Sequence derived from alignment at H-paniculata_contig13345:2253..6846- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCGGATTGGGGGACGCGCTGTTCATTGCTGGCACGCCGGGCACGGGAAA
GACAGCCATAGCTATGGAGGGCGGATTGGGGGACGCGCTGTTCATTGCTG
GCACGCCGGGCACGGGAAAGACAGCCATAGCTATGGAGGTGATGCGGCTC
CTAAGGGAGCAGCAGGCGCGGGGTGGGTTGCCAGAGTTCAAATTGGTTAC
GCTCAACGGAATGCGACTCGTCAGACCGCATCAGGTGATGCGGCTCCTAA
GGGAGCAGCAGGCGCGGGGTGGGTTGCCAGAGTTCAAATTGGTTACGCTC
AACGGAATGCGACTCGTCAGACCGCATCAGGCCTACACCGAACTATGGAT
GGCCCTCGAGGGGGAGATGCTGTCGCCCAAGCGGGCTCTGAGCAAGCTAG
AGCACTACTTTTCTGATAGAGATCCTAACCGACAGTTCGTTGTGCTTCTG
GTAGACGAGCTGGACTACATGGCCTACACCGAACTATGGATGGCCCTCGA
GGGGGAGATGCTGTCGCCCAAGCGGGCTCTGAGCAAGCTAGAGCACTACT
TTTCTGATAGAGATCCTAACCGACAGTTCGTTGTGCTTCTGGTAGACGAG
CTGGACTACATGACGACACCGAAGCAAACGGTGCTGTACAACCTGTTCGA
GTGGCCGTCAGGGGTAAATGCTCGCCTCGTCATGATGGGCGTCGCCAATA
CCATGGATCTCCCCGAGAGGTGTCCGCCTCGCATCAGCAGCCGAATAACC
TCCAGGCTCATGTTCCCCGCATACAACAAAAATCAGACGACACCGAAGCA
AACGGTGCTGTACAACCTGTTCGAGTGGCCGTCAGGGGTAAATGCTCGCC
TCGTCATGATGGGCGTCGCCAATACCATGGATCTCCCCGAGAGGTGTCCG
CCTCGCATCAGCAGCCGAATAACCTCCAGGCTCATGTTCCCCGCATACAA
CAAAAATCAGCTAGTGGTGATCTTGCAACAGAGACTGGTGGAGGCCAACG
CCCTGGCAGGAAAGCAGCAGCAACAACAGCTGTAGCTAGTGGTGATCTTG
CAACAGAGACTGGTGGAGGCCAACGCCCTGGCAGGAAAGCAGCAGCAACA
ACAGCTGTAG
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