mRNA_H-paniculata_contig1333.2085.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1333.2085.1
Unique NamemRNA_H-paniculata_contig1333.2085.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1333.2085.1 vs. uniprot
Match: A0A6H5JST3_9PHAE (RNA_pol_L_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST3_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 1.340e-62
Identity = 102/123 (82.93%), Postives = 111/123 (90.24%), Query Frame = 2 
Query:   11 MNAPERSECWRLNDDEKKLAYTPDTKIPHAGTFHIVKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLINMINVKVQTNGDNTPVDAMSAAIEDLSQEMESLQAMFQDQVVIAKQNMEQEEYGS 379
            MNAPERSE WRLNDDEKKLAYTPDTKIPHAGTF I+KEDHTLGNLLRMQLLADRQVRFAGYMQPHPL N I++KVQTNGDNTPVDA+SAA EDLSQEME L+ +FQ+QV  AK   EQE++GS
Sbjct:    1 MNAPERSESWRLNDDEKKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEMEGLREVFQEQVAAAKHAAEQEQFGS 123
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BLAST of mRNA_H-paniculata_contig1333.2085.1 vs. uniprot
Match: D7G4D0_ECTSI (RNA polymerase II core subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D0_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.910e-48
Identity = 85/107 (79.44%), Postives = 96/107 (89.72%), Query Frame = 2 
Query:   59 KKLAYTPDTKIPHAGTFHIVKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLINMINVKVQTNGDNTPVDAMSAAIEDLSQEMESLQAMFQDQVVIAKQNMEQEEYGS 379
            ++LAYTPDTKIPHAGTF I+KEDHTLGNLLRMQLLADRQVRFAGYMQPHPL N I++KVQTNGDNTPVDA+SAA EDLSQEME L+ +FQ+QV  AK   EQE++GS
Sbjct:   64 RRLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEMEGLREVFQEQVAAAKHAAEQEQFGS 170
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BLAST of mRNA_H-paniculata_contig1333.2085.1 vs. uniprot
Match: A0A836CIX8_9STRA (Putative DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX8_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.570e-43
Identity = 77/121 (63.64%), Postives = 96/121 (79.34%), Query Frame = 2 
Query:   11 MNAPERSECWRLNDDEKKLAYTPDTKIPHAGTFHIVKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLINMINVKVQTNGDNTPVDAMSAAIEDLSQEMESLQAMFQDQVVIAKQNMEQEEY 373
            MNAPERSE WRLN+ E+K+ Y PDTKIP+AG F I KEDHTLGNL+RMQLL DRQVRFAGY+ PHPL N++ VKVQTNG+ TP+DA+S AIEDL+ E+++L   F + V+  K+  E  +Y
Sbjct:    1 MNAPERSESWRLNEGEEKVDYEPDTKIPNAGNFIIKKEDHTLGNLIRMQLLQDRQVRFAGYLMPHPLENIMRVKVQTNGEVTPMDALSTAIEDLTSEVDNLTQRFAEGVLACKRLQESRQY 121
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BLAST of mRNA_H-paniculata_contig1333.2085.1 vs. uniprot
Match: A0A6U1NZH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NZH5_9STRA)

HSP 1 Score: 130 bits (326), Expect = 5.740e-32
Identity = 65/118 (55.08%), Postives = 85/118 (72.03%), Query Frame = 2 
Query:   11 MNAPERSECWRLNDDEKKLAYTPDTKIPHAGTFHIVKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLINMINVKVQTNGDNT-PVDAMSAAIEDLSQEMESLQAMFQDQVVIAKQNME 361
            MNA +RS+ +RL + EKKL Y PDTKIP+AGTF + +EDHTLGNLLRMQLL D  VRFAGY  PHPL++ + VK+QT      P+ AMS +IEDLS E + L+  F++ +   KQ+ +
Sbjct:    1 MNAQDRSQSYRLAEGEKKLTYEPDTKIPNAGTFTLNREDHTLGNLLRMQLLQDSSVRFAGYQHPHPLVHHLLVKIQTTDPPANPIQAMSTSIEDLSSEFDFLEQRFKEDIDRFKQDRQ 118
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BLAST of mRNA_H-paniculata_contig1333.2085.1 vs. uniprot
Match: K0SS38_THAOC (RNA_pol_L_2 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SS38_THAOC)

HSP 1 Score: 129 bits (323), Expect = 1.360e-31
Identity = 62/101 (61.39%), Postives = 79/101 (78.22%), Query Frame = 2 
Query:   14 NAPERSECWRLNDDEKKLAYTPDTKIPHAGTFHIVKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLINMINVKVQTNGDNT-PVDAMSAAIEDLSQEMESL 313
            N PERS+ + L DDE+K+ Y PDTK+ +AGTF + KEDHT+GNLLRMQLL D QV+FAGYM PHPL+N I++KVQT+     P +++SAAIEDLS E + L
Sbjct:    3 NRPERSDAFLLGDDEEKIEYQPDTKVANAGTFTLNKEDHTVGNLLRMQLLRDPQVKFAGYMHPHPLVNRIHLKVQTSTSQVAPTESLSAAIEDLSNETDHL 103
[Close]
BLAST of mRNA_H-paniculata_contig1333.2085.1 vs. uniprot
Match: A0A7R9U3J4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3J4_9STRA)

HSP 1 Score: 127 bits (318), Expect = 5.570e-31
Identity = 59/111 (53.15%), Postives = 83/111 (74.77%), Query Frame = 2 
Query:   11 MNAPERSECWR--LNDDEKKLAYTPDTKIPHAGTFHIVKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLINMINVKVQTNGDNTPVDAMSAAIEDLSQEMESLQAMFQDQV 337
            MNAP+RSECW     D+E K+ Y  DTKIP+AGTF I++EDHTLGNLLRM+LL D+ VRFAGY+ PHPL ++I ++VQ   + TP+ +++ A++ L Q+ ++L   F+ QV
Sbjct:    1 MNAPDRSECWTSGYEDEENKVTYQKDTKIPNAGTFTIMREDHTLGNLLRMELLKDQNVRFAGYIAPHPLEHVIKLRVQAADNVTPIRSVTQAVDHLQQQFDTLSKSFESQV 111
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BLAST of mRNA_H-paniculata_contig1333.2085.1 vs. uniprot
Match: A0A7R9WNF7_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WNF7_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.010e-30
Identity = 63/122 (51.64%), Postives = 86/122 (70.49%), Query Frame = 2 
Query:   11 MNAPERSECWRLNDD--EKKLAYTPDTKIPHAGTFHIVKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLINMINVKVQTNGDNT-PVDAMSAAIEDLSQEMESLQAMFQDQVVIAKQNMEQE 367
            MNAPER+  + L++D  E K+ YT DTK+ +AGTF + KEDHT+GNL RMQLL D  VRFAGY  PHPL++ +N+K+QTN     PV+ +S+AIEDLS E + L + FQ+ +   K+  + E
Sbjct:    1 MNAPERTAAFLLDEDLGEVKIEYTADTKVTNAGTFKLNKEDHTVGNLFRMQLLRDPSVRFAGYYHPHPLVHFLNMKIQTNNSTVAPVEVLSSAIEDLSNETDHLTSQFQEAIDTWKRENDTE 122
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BLAST of mRNA_H-paniculata_contig1333.2085.1 vs. uniprot
Match: A0A7S2NUR5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NUR5_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.450e-30
Identity = 64/109 (58.72%), Postives = 84/109 (77.06%), Query Frame = 2 
Query:   14 NAPERSECWRLNDD--EKKLAYTPDTKIPHAGTFHIVKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLINMINVKVQTNGDN-TPVDAMSAAIEDLSQEMESLQAMFQD 331
            NAPERS C+ L++D  E K+ YTPDTK+ +AG F I KEDHTLGNLLRMQLL + +VRF+GY  PHPLI+++ +KVQT+  N +PV+ +SAAIEDLS E + L+   +D
Sbjct:    3 NAPERSACFLLDEDAGEVKITYTPDTKVANAGMFIINKEDHTLGNLLRMQLLRNPEVRFSGYRIPHPLIHLVELKVQTSSGNVSPVEVVSAAIEDLSNESDHLETAARD 111
[Close]
BLAST of mRNA_H-paniculata_contig1333.2085.1 vs. uniprot
Match: A0A448ZBV9_9STRA (RNA_pol_L_2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV9_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.680e-30
Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = 2 
Query:   11 MNAPERSECWRLNDD--EKKLAYTPDTKIPHAGTFHIVKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLINMINVKVQTNGDNT-PVDAMSAAIEDLSQEMESLQAMFQDQVVIAKQNMEQEEYGS 379
            MNAPER++ + L++D  E K+ YT DTK+ +AGTF   KEDHT+GNL RMQLL D  VRFAGY+ PHPL+  I++K+QTN     PV+ +SAAI+DLS E + L   FQ+     K+  + E  G+
Sbjct:    1 MNAPERTQSFLLDEDTGELKIVYTADTKVTNAGTFRFNKEDHTVGNLFRMQLLRDPSVRFAGYLHPHPLVYFIDLKIQTNNSTVAPVEVLSAAIDDLSNETDHLMTQFQEACEEWKRTNDTEVSGN 126
[Close]
BLAST of mRNA_H-paniculata_contig1333.2085.1 vs. uniprot
Match: F0Y9X2_AURAN (RNA_pol_L_2 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9X2_AURAN)

HSP 1 Score: 125 bits (313), Expect = 2.800e-30
Identity = 63/114 (55.26%), Postives = 79/114 (69.30%), Query Frame = 2 
Query:   11 MNAPERSECWRLNDDEKKLAYTPDTKIPHAGTFHIVKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLINMINVKVQTNGDN-TPVDAMSAAIEDLSQEMESLQAMFQDQVVIAK 349
            MNAPER + ++L+DDEK++ Y  D KIP+AGTF I KEDHT+GNLLRMQ+L     +FAGY  PHPL+N   VK+QT   N TP+ A   AIEDL  EM+ L   F++QV   K
Sbjct:    1 MNAPERHKKYQLDDDEKRMTYKNDEKIPNAGTFTINKEDHTVGNLLRMQILRSPDTKFAGYQLPHPLMNECRVKIQTTSANLTPIGAFQRAIEDLQSEMDILDRNFREQVAKKK 114
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1333.2085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JST3_9PHAE1.340e-6282.93RNA_pol_L_2 domain-containing protein n=1 Tax=Ecto... [more]
D7G4D0_ECTSI1.910e-4879.44RNA polymerase II core subunit n=1 Tax=Ectocarpus ... [more]
A0A836CIX8_9STRA1.570e-4363.64Putative DNA-directed RNA polymerase II 13.6 kDa p... [more]
A0A6U1NZH5_9STRA5.740e-3255.08Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K0SS38_THAOC1.360e-3161.39RNA_pol_L_2 domain-containing protein n=1 Tax=Thal... [more]
A0A7R9U3J4_9STRA5.570e-3153.15Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9WNF7_9STRA2.010e-3051.64Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2NUR5_9STRA2.450e-3058.72Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A448ZBV9_9STRA2.680e-3050.79RNA_pol_L_2 domain-containing protein n=1 Tax=Pseu... [more]
F0Y9X2_AURAN2.800e-3055.26RNA_pol_L_2 domain-containing protein n=1 Tax=Aure... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1333contigH-paniculata_contig1333:6354..14259 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score176.4
Seed ortholog evalue8.2e-42
Seed eggNOG ortholog2880.D7G4D0
Preferred nameRPB11
KEGG rclassRC02795
KEGG koko:K03008
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko05016,ko05169,map00230,map00240,map01100,map03020,map05016,map05169
KEGG ModuleM00180
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0006139,GO:0006351,GO:0006353,GO:0006366,GO:0006369,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016591,GO:0018130,GO:0019438,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0055029,GO:0061695,GO:0070013,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.RNA polymerase II activity
EggNOG OGsCOG1761@1,KOG4392@2759
Ec32 ortholog descriptionDNA-directed RNA polymerase, RBP11-like dimerisation domain
Ec32 orthologEc-00_007330.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko03021,ko03400
Exons5
Model size1909
Cds size372
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929056.7211504-UTR-H-paniculata_contig1333:6353..78801622929056.7211504-UTR-H-paniculata_contig1333:6353..7880Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1333 6354..7880 -
1691480714.7021413-UTR-H-paniculata_contig1333:6353..78801691480714.7021413-UTR-H-paniculata_contig1333:6353..7880Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1333 6354..7880 -
1622929056.810887-UTR-H-paniculata_contig1333:14249..142591622929056.810887-UTR-H-paniculata_contig1333:14249..14259Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1333 14250..14259 -
1691480714.771911-UTR-H-paniculata_contig1333:14249..142591691480714.771911-UTR-H-paniculata_contig1333:14249..14259Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1333 14250..14259 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929056.73353-CDS-H-paniculata_contig1333:7880..80301622929056.73353-CDS-H-paniculata_contig1333:7880..8030Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1333 7881..8030 -
1691480714.720663-CDS-H-paniculata_contig1333:7880..80301691480714.720663-CDS-H-paniculata_contig1333:7880..8030Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1333 7881..8030 -
1622929056.745477-CDS-H-paniculata_contig1333:10031..101101622929056.745477-CDS-H-paniculata_contig1333:10031..10110Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1333 10032..10110 -
1691480714.7315993-CDS-H-paniculata_contig1333:10031..101101691480714.7315993-CDS-H-paniculata_contig1333:10031..10110Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1333 10032..10110 -
1622929056.7598844-CDS-H-paniculata_contig1333:11037..111271622929056.7598844-CDS-H-paniculata_contig1333:11037..11127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1333 11038..11127 -
1691480714.741461-CDS-H-paniculata_contig1333:11037..111271691480714.741461-CDS-H-paniculata_contig1333:11037..11127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1333 11038..11127 -
1622929056.773951-CDS-H-paniculata_contig1333:12061..120971622929056.773951-CDS-H-paniculata_contig1333:12061..12097Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1333 12062..12097 -
1691480714.7541385-CDS-H-paniculata_contig1333:12061..120971691480714.7541385-CDS-H-paniculata_contig1333:12061..12097Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1333 12062..12097 -
1622929056.786554-CDS-H-paniculata_contig1333:14232..142491622929056.786554-CDS-H-paniculata_contig1333:14232..14249Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1333 14233..14249 -
1691480714.763896-CDS-H-paniculata_contig1333:14232..142491691480714.763896-CDS-H-paniculata_contig1333:14232..14249Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1333 14233..14249 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1333.2085.1prot_H-paniculata_contig1333.2085.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1333 7881..14249 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1333.2085.1

>prot_H-paniculata_contig1333.2085.1 ID=prot_H-paniculata_contig1333.2085.1|Name=mRNA_H-paniculata_contig1333.2085.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MNAPERSECWRLNDDEKKLAYTPDTKIPHAGTFHIVKEDHTLGNLLRMQL
LADRQVRFAGYMQPHPLINMINVKVQTNGDNTPVDAMSAAIEDLSQEMES
LQAMFQDQVVIAKQNMEQEEYGS*
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mRNA from alignment at H-paniculata_contig1333:6354..14259-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1333.2085.1 ID=mRNA_H-paniculata_contig1333.2085.1|Name=mRNA_H-paniculata_contig1333.2085.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7906bp|location=Sequence derived from alignment at H-paniculata_contig1333:6354..14259- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGCTTGGCAATGAATGCCCCTGAGAGGTAACAGGTTTTACTGTGGTCGT
GTTCCTAATTGAAAGGGTAGGCAGTAGTTGGCTTCAAAGTCTTGGCTATT
TAGCTATTTTGGTCCAGTCCAAAGTTTAAATTTTGTGCCCTGTCGCTCTC
CAATAAATTTACACATCACAGTTTTTAAGCCCTATTTTCTCTAACAAGCA
AGGCCCTGCGCTGCACTGTACAAATAACAAATATTTGTGTTGACGAATCT
CGATGAGACCCTTACTGCGATACGAATTTCGGGGTCGGCTAGTACCTTAA
ATATTATTTTTCGAGAAAGTTGAGTTTGAAGCATGTTATCACGCGAGACC
GGGGGGGGTGTTATACTCCGTATACCACTACTGTTCTCATCGCAGCACGC
CCTACATTTTCTGTTTCCCTGGTGGAAGAATGGCACACGCGCACACACAC
ACACACACACACACACACACACGTGCATGTCTCGCCCATCATTTTCTCGA
TTTCGACTATTCCTTTTCTGTGACTGCTACAGCTTACAGACAGTGTTCAT
TTACACAGTAGGTCAGCAGTGTTGATTTTCTTCGGTCGTGGATCAGTTCT
CTTGTCGAAACCCCGGATTCCAAGTTGGGAATATATTGGCTCTATTCTTG
CCTTGTATTATCACGCGGCGAGGGCAGCAATCCCGTTCTCTGGTTAACGT
TTGAGTTGACTGCGGTATACCCTGAGAGTATCCCTTTCCCTTCCGCAAGT
ATGTTTTTTTATTGTGGGGTACTTTTCACCACAGACTGTTGTTCTCTTTG
GTCAAGAAACAACAATTTTACGATACTGGTGCACATTTCTAGGGTATTTG
ACCCTAGGATGTTTTCGGCGAAAAAAGTGTCCAAATAAACCACCTCGGGC
TGAAAATTGGACCAGGCCTTGCATAGCTCTCTGAATCAAGTCTCAAGTTC
AAATCGGGCTATTTCGAATGTGTAAGAGCGATTTTTGCGCAAATTAGTAT
CCATTTTATAACGATTGCACATTTCACGAACACAGCCGATGCAGCGCCCA
TCCTTTAGAGGGAAGACGGGTCACATCCCACCCATATACGGTGAAAGAAA
CCGCGGTGAGGCATACCGTTCAGCGGAACATATGCCCACGGAATCAAAAA
CAGTACCGAACAAGAATACAGAATAAGCGCTTCAATTGTTCTAGGTATTT
TTAGCAACAGCTTTTTCTCGTCTACTCTACAATCAGAATTTTGATTGGTG
TGATCGTCGGCATGAATGACTGGCTGTGGAAAACGAAAAAATTCTGTTCA
CGAAGAATATCTTCAAAACTATTTGGGCTGGCATTATTTTCTTGTCTGGT
ACTGTTTACGTTTTGACGTATTTCGCTGATCAGCACATTTTTTAGCGCGT
TTTTTCCCACTGTATAGTGTAGAATATGGCCCACCATAACGATCGAAGGA
TGAGCTATTTCGGCTGTGTTCGTAAAATAGGCGATCGTTTCAAAATTGGT
TCTTAGTATATGCAAAAATCACTCCTGTACGCTCAAAATGGCTTGGTTGG
GAATCAGAGTTGGCTCAGAGACTGGTGTGAGACTTACCAGAGTGTGGTCC
AATTTTCAATTTATAACCCGCTGCGGTTCTCGTTTGGACGCCGTTTTTGC
TGAATAGCATGATTTTTGAAAAATACAAAATGTTATCATCGAGCGATGGT
GCCAACGACTGCATCGTCCTCCAAGGTATATATTTATTTTGTCTCGGTCT
ACCCTTTAACATTATACAGTAGCCACCACCGTAGTTGTGTAAGTCTGTAT
ACCTCCACCAGTGAACGTAGAGGCACAGAGCAGTCTGTGACTCTGGTAGA
AGGGGCCAAAATCCCATAGATTGTTGTTATTTTCTAGCCAATGTCGACAT
TTTCTTTGCTTGTGTTCTATTTCCCAGGAGATCCAACGCCAAAACCCTTG
TTGATATTTATAATATACCTCGAAGGCTTTCGTATGTATATCAGATCGAG
TACGGCCGATGCTCATCTCACGTGATCGTCATCAGATTCTATATATAGTG
ACATATTTGTGCACGTAAGACTGACATCGACACTGAAATATATCCGCATT
TCGCGGTTGAGTTTGTTGGTTTCACTTGATCCCATTTTTGTTCGTTCACC
GTGTACACACAGGTCAGAATGCTGGCGACTCAACGACGACGAAAAAAAGT
GAGTGTTCTTCAGCACCGTACACCTGCTACCCTCTCTTCTCTTTATTGCT
GGGGAAACGGGGATGACAGTCCGTAATATGTCTAAGGGTCGTGGTACTGT
CAACCAGCGACGATGGTTTTTGCCCTCCGATTCTTGTTTTAGAGCGTTTT
TTCGAAATAGAAAAACAAAAAATCAGGCTCGCTCTCGTCTAGAGTATGTA
GCTTGGCCCTACAATAACCCTGGGGAACGGGCGCGTGTGAAAGACTGTGG
TACTGCAGTATCACCGGCTTTGTAGCGTCTAGCGTTTCTCGAACCTCACA
GGTATCCACTCTTGATTATTAAAATGTGCATCTTGATTGTTTTTTTGCAA
CTTGGTTGCGGTAGTTAATGCTTATTGGTCCATTCCAACGAGGAATAAGG
ACATTGCACTGTTGAACAAACCCTCCTATCTAACGACGGATACTGACAAG
ATCTGTCCAATAGCACAACCTTCGTCTCGAGCGCCGTAGTTCGCTAGAAA
ATCGGGAGTTGAAAAAACGCTATCGCTCCGGTTGTTGAATGCACTTTGGG
GAAAAACACGGTAACAATATGTGAATGATGACATGTACATTGCTGACTCT
GGACTGAACACCAGAGTCAGAGCTTTTCCTCCTCAGGCTCTACCTTCCGT
AGCGAGAGGGCATCGCGCCATTATCTGACGTCGACCAAAAGACGGCCCTG
TCAATTTTTTATGGAGCATGAGTGTTACTGTTCTCTTTTTCAAGGCAGGA
AAAAATAGACAAATAATGTGAACTGAGGTAAAAGCAACGTTTCCGACGGT
TTCTGTCCAGGAATATCGATTCCCCTGTCCCCTGCAGTGACATGCCCTGC
TTGGGGTGTGCCAATCGCTCAGAAAATCATCGTGTTTTAGCAATCTCGCC
GTGATTTTCTCTCGCTGTATCATTTCTACCAGACTCGCCTACACGCCAGA
CACGAAGATCCCACATGCCGGAACCTTTCACATAGTCAAGGAGGATCACA
CACTCGGAAATCTGCTACGAATGTAAGCTCGCTCCTTGGCGGGGTCTGTA
CACCTGATATCTGCTGTGAATGTAGAGGTTGCCTTTTCCCCGTGCAATTG
TAGTTACACACCTGTCTGCCCGATAGTTATTGCTGATACCTTTGTACAGT
GCTTGTGCTGTTGCACTGGCGTAGACGCCTGTACCTTTACCGTGCTGCCC
TGTTTGCGCTACAATAGCGTGCTGTAGTCGCCTGTGCGGGCACTGTGCTT
TATTGCTGCAATTGGCGAAAGTTATTGTACCCCTTTTTATGTGGTGTCCA
TGGTAAGACAGGCGTACAGAAGCGTCGTTGTTCGTTTGTTGTGGCGCTTG
AAATATGGAATTGAGCACAGCAGTCCCCGTCTCCTTGCACGAAAGAACTA
GTGTCAACCAGTACACGTCGGCGCATGTTGTTGGATGGGATGTAGGATGG
GGCTATGTATTTCACACAACGCACGAAATGTTCAGCAAAACTGGAAGATC
GTGTGTGTGGCCCTTGATTGAGCGACCACCAGCTTTTGCTGCAGAGGTTG
ACGATGCGGTTGCTGTATATAAATGAAGAAACGGTGTGTACGACGGGGCC
AAGACCTGGCTGGCACTCGACGAAAGTCTCCCCCCCCCCCCCCACCTGTT
GTTACACTGGAATAGCGATCATACGTCAAGAACACTATTTGTCTTGTATC
ATTCAACACTAAATCGGCTGAATGGGTATTTTTGTTGAAAAAATTAAACT
GGCTTAAATCATCCAACCCAGTCTTATGGGTGCAAGCAATGGCAGGCTCT
ATTCGATCCGTCGGTCAACGGTCAGAATATTGATTGCCCACTTTTGATCC
AGGCACTTTTCGATGCCCCCTGGTCATCCTCCAATCCTTATCTTCCCCGT
TCTCAAACGGCGTGGCCTCTCTTCGTCTCCCATGTTGCCTTGCTGGCAGG
CAACTTCTCGCTGACAGACAAGTACGGTTTGCGGGGTACATGCAGCCACA
CCCATTGATTAACATGATTAACGTCAAGGTGAGGTGGACGGAGGAAGAGA
ATGGTTTTCGTGAACACTGACTTGTGCGTTTCGATCCTGCTCAAATGCCT
TTCGTAAACTGCGCTGATGAGATTTGCGTGGCACGCTCTTTTCTCCGTCT
CTGTATCAATAGCTTTTACACAGATGTTCCGAAGTCACAGGTGATGCTCA
ATCATTTTTTCTTCTATTAATAGTGTTTGTTTTTCTTTTCGACATTTTTG
GTAATTTAAACTCAACTGTTTTTTGTCTTGAAAAATCGGTTTCATCGAAA
AAGTGCTGAGTCCTGGTGGCACCTTTATTTCTCGATTCTGAAGAGAGATG
GAAGCCAGAACGCGTGTTTTTCTGCCTCCGACGGCCTCTTCGGCGAGGCC
CACTCACCAGCCGGGGGGGGGTTCTGGCTCGCGCTAAAGCGCTCACCTAG
CGCTTCGCGCGGCGGTCCGACGTCGCTCGCACTGATGAGTTGTCGATACA
TCGGCGAAGCCGACACATCTGACGGGTATATATAAATGTGACGTTTGAAT
GACCGATACACAGGCCTGATGATTTTTGATTGTGGTACTTTGGAAAAAAA
AACCCTAGGAGTCATGACCCCTAGTCGACTGTGTAGGGTTTGATCATTGT
TTTGGCCGTTACGAAACAAGCCTGGTATTTGCCCGTTCTTCCTCTAGAGT
GAATCCAGTATAAGAAGGTCCCAATCTGTGAAAAAAAAAACGATTTCCCT
TTTGAATCTAAGATGCGTCAATCAGCGAGCAATCTACATCTACTCCAAGC
TTTCTGTGTCCATGTATACGTATGGTTAGGTGGTTCTCCCATCTGGATCT
TTTGATTTAGCCTGAGTATGCGTCTGAAACTGACTAAACTGGCGTAACGG
TTGCGGGTGTTCTAGGAACATTCTCGGAGTTTTGTATTATTCTGCTTCTT
ATTTCTTCACGAATCTGGTTCGTATCTACATAGAATCTGGTTCGAATCCG
TTTCTTGATACGGATCGGAGTAGAGACATGAGTGAGCCACCGTGTACCCT
TCTCTGTCATTCTCCACGACCTTGTCTTTACACTCGCGCTACGAACGCAA
TCCCGTCGAGGCCTCGAGATATCGAACATTTTGTAGATCCTTTCGCCAGT
ACTCACAGCTGGCCATGAAATCTTTATTTTGGTCGTTACGGGGCCTGGTT
CCTAGAGATATTAGGAAGCAACGTCTTAGGAGTATAGAAATACAACTTCA
ACGTAAGGTAGAAGTCTGACTTGGTCAGGATTGTAAATTACGCGGTCGTT
CAATCGAGTTTTCCAAAAAAAAATTGGAGTATATCATGTGCACTGTTCAT
GCACTTGCTGATTCCGCTGAGTCGAGGGAAAGCGAGATGAGCCCCGCATT
GAAGCCGGAACAGGGAGCTAAGTTGGAAAGGGGACAAGTGTTGACACCTC
CGGAGTAGAAGGGGCAGAATTGGAAGATAACAAATGCGCAAGCGCTCTCG
GCCAAGCAATGTGCCAACAAGCAGGCGCTCTCATCGTGAAGGGGGCGCTT
CGCATGCGCCCCTTATGACGGCACCTCTGTTGGCTAAAATGGCTCGTGTA
GTTTTTACTGGTTAATAAAGTGCCGAGACACTTGGAGTCGTCATATCATA
GGTGTCCGTCCTTTGCTGATTTTTGCCCCATGTTCGGTATATTTTCTGGT
GACTACGATGCCTGGAAGTGCTTTTGTTCATTTTGTGGATAATAACCAAG
TAATTCAATAACTTCAAGATGCAGAGCTACCTCCATTTTGTGCTAAGATT
ATTATGTCTGCTACAGTAGGTTATTTTTACCTGCTCCTCTACTTGACTTG
TTCGTTTGGCTCCCCCCCCCCCCCCTCTCCTGAGCGAGAGCGACTGGCCA
TCGGAAATTTCTCTGATGGGAACAAAGCTCCTTCTTCTCGAGGATGCGTG
GTCAGGGGTATAACTACTGCGGCATGCAATAATACATGAGTACCCCCCCC
CCCCCCTCTGTTTTTTTGGTCTGCTGCAGGTCCAGACGAATGGTGACAAT
ACTCCTGTTGATGCAATGTCGGCAGCGATCGAAGACCTTTCTCAGGAGAT
GGAAAGCCTTCAGGCTATGTTCCAGGACCAAGTGGTGATTGCCAAGCAAA
ATATGGAGCAGGAAGAGTATGGCTCCTAGCTTTTGGGCTCGTGAATTGTA
TTTGTTGAATTGATTTAAAGTCGTGTTGTGTGATTTGCCGTTTGGGACGT
GTGAAGCCTTTTGATTTTTTTCCCGTCCCGAATGATGAAAGAAAAAACCT
TTCAACCCCCCACCCCCCCCCCAGACAAATACGAATATTTGCAAATGGTT
TTTGCAACAAACAAATGAAAGTATTCGCCTGAGTTTCAGAATGAGCTTAG
TGTATTTTTACGTGCCCGGACCATTCACGATCGGTAATAATGCTCGTGAA
TGGAATGGACAGTGAGCGGTCAGTGGGTACTTTATTCTACGTGTCCGCTC
ATTCTGAAACTCAGGCGAATAATTTCATTTATTTGTTGCAAACCATTTGT
AAATATTCGTATTCAAGGAAACTTAGTGATTTCTATGAGATTTGCTCCCC
CACAAGAACACCACCCCCCGTGTATCTCAGAGAGCCCCGCCGTTTAGCGA
CGTCGTCCTCTTTTTTCACCACAGAAGTAAAGCAACGTGGGCCAGAAAAT
CGCTTGTCGCGATATACCTCCAAGCACCATCCCTCCATGCAATGGTGCAC
ATTGCTGTTCTGTCTCCATGCCGAGAGTGGTGGGAAAGGCTGATGCGAAT
CGATAAATCCAGAGTATCGTTGAACGTTGTTTTTCTTGTTCACAACGAGT
CATCCTATGGTACGGGGGGGGGGGGTATTTGAGCCTCTTTGTTTAACGAG
GTAGCCGCTTTCAGAAGGGGATCGGGTATTTGTTTTTTTTTGTAGAATGT
TGCCCTCCCTGAACGGAAATCCCATCCAAACTCGTGCGTGGACTGCGCCT
CTAGGGATGCAAAGGTTTTAAATGCACTTGATACCTATGTCATTCTACGG
TTGGGGGGGGGGGGGGGTATTTGAACCTCTTTGTTTAACGAAGTAGCCGC
TTTCAGAAGGGGATCGGGCATTTGTATTTTGTTGTTTTGCATTTGTTGCC
TCCCCTTGAACAAAAATTCCATTTCAAATCGTGGACTACACCAAGTCGTA
CCATCAAGTCGTAGACATGGCTGCTGTCCGTTCGTACCATCATGGATAAC
GCGACACCATCCGCGCAGCGACTATCGCTCGCTGGGGAACTCTCCGAAGA
TGGTGGTGGTACCTGTCAACCTTTCCCCCTCTGTTCATTATGTTGCCTTT
AACGCAGTATCAACCGTCAGATAAATATTGTGCTGCAGCAGTACACCCGA
ACTGTATTGTACTATATACTGCGTGCATCCTCATCTGTTTGCACCGTCCA
GCTGGTTGCCACTACTCAATGAAACCAATGTGGGTGCTTCAGTCTACGAC
CTGTGCTGTCTCATCCACATCAATTATCAAGCACATGCCGTTGCTTCTTT
GGCAAACTAACCGTGGACGTGTAATGGTCGAGATGAAAATAGTCATCGTT
GACCCCTTTCCCTCCTATTCAACGTCCCGCGATCCTCATATCGTGATATA
CCGGTGTGGTATCATTCACGGCGAAAACAACTTCGTTCGTCCTAAATCGA
TGCCCC
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Coding sequence (CDS) from alignment at H-paniculata_contig1333:6354..14259-

>mRNA_H-paniculata_contig1333.2085.1 ID=mRNA_H-paniculata_contig1333.2085.1|Name=mRNA_H-paniculata_contig1333.2085.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=744bp|location=Sequence derived from alignment at H-paniculata_contig1333:6354..14259- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAATGCCCCTGAGAGATGAATGCCCCTGAGAGGTCAGAATGCTGGCGA
CTCAACGACGACGAAAAAAAGTCAGAATGCTGGCGACTCAACGACGACGA
AAAAAAACTCGCCTACACGCCAGACACGAAGATCCCACATGCCGGAACCT
TTCACATAGTCAAGGAGGATCACACACTCGGAAATCTGCTACGAATACTC
GCCTACACGCCAGACACGAAGATCCCACATGCCGGAACCTTTCACATAGT
CAAGGAGGATCACACACTCGGAAATCTGCTACGAATGCAACTTCTCGCTG
ACAGACAAGTACGGTTTGCGGGGTACATGCAGCCACACCCATTGATTAAC
ATGATTAACGTCAAGGCAACTTCTCGCTGACAGACAAGTACGGTTTGCGG
GGTACATGCAGCCACACCCATTGATTAACATGATTAACGTCAAGGTCCAG
ACGAATGGTGACAATACTCCTGTTGATGCAATGTCGGCAGCGATCGAAGA
CCTTTCTCAGGAGATGGAAAGCCTTCAGGCTATGTTCCAGGACCAAGTGG
TGATTGCCAAGCAAAATATGGAGCAGGAAGAGTATGGCTCCTAGGTCCAG
ACGAATGGTGACAATACTCCTGTTGATGCAATGTCGGCAGCGATCGAAGA
CCTTTCTCAGGAGATGGAAAGCCTTCAGGCTATGTTCCAGGACCAAGTGG
TGATTGCCAAGCAAAATATGGAGCAGGAAGAGTATGGCTCCTAG
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