prot_H-paniculata_contig1330.2069.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1330.2069.1
Unique Nameprot_H-paniculata_contig1330.2069.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length248
Homology
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BLAST of mRNA_H-paniculata_contig1330.2069.1 vs. uniprot
Match: D7FVK0_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK0_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.250e-25
Identity = 76/177 (42.94%), Postives = 95/177 (53.67%), Query Frame = 0 
Query:   28 ENPQGGAEIYDSFTPLHHACRVVGGVDVVEVLLGAGADADGL---AGREANVSAAGPGVQCPGCSVRPLHIAAAHGNATVVRALTWKGCRLDAETPDPSRSTPLALAVQGGHLEATRALVEAGASIQAVPRREDGTQLAPSLARMAARMKRGDLVSVLTAALVKRDCAESWIIEWAS 201
            +NP G         PLH ACR  GG  +VE LL  GAD +     AG E                +RPLH+AAAHGNA  V ALT +GC LD +T DPS STPL                       AVPR +DG + A SLAR+AA M+RGD+V+++  A+V RD +E+W IEWA+
Sbjct:  735 DNPAGAGTARVLSAPLHAACRG-GGRTLVEALLEKGADVNASQDPAGEEEGRRR----------MLRPLHVAAAHGNAEAVGALTLQGCLLDVKTRDPSGSTPLXXXXXXXXXXXXXXXXXXXXXXXAVPRGQDGKERATSLARLAADMRRGDMVALMARAIVDRDSSETWAIEWAA 900
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BLAST of mRNA_H-paniculata_contig1330.2069.1 vs. uniprot
Match: A0A6H5KV34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV34_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.210e-21
Identity = 79/212 (37.26%), Postives = 102/212 (48.11%), Query Frame = 0 
Query:   28 ENPQGGAEIYDSFTPLHHACRVVGGVDVVEVLLGAGADADGLAGREANVSAAGPGVQCPGCSVRPLHIAAAHGNATVVRALTWKGCRLDAETPDPS---RSTPLALAVQGGHLEATRALVEAGASIQAVPRREDGTQLAPSLARMAARMKRGDLVSVLTAALVKRDCAESWIIEWASEVNGKSPEQVIGTAGGIGANGSEAGGVETGEDEEQ 236
            +NP G         PLH ACR  GG  +VE LL  GAD         N S                           V ALT +GC LD +T DPS    STPL +AVQ           +AGA+I AVPR +DG + A SLAR+AA M+RGD+V++L  A+V RD +E+W  EWA+    +         GG+ A     GG + G +EE+
Sbjct:  729 DNPAGAGTARVLSAPLHAACRG-GGRTLVEALLEKGADV--------NASRDPXXXXXXXXXXXXXXXXXXXXXXEAVGALTLRGCLLDVKTRDPSGWVSSTPLGIAVQEXXXXXXXXXXDAGAAIDAVPRGQDGKERATSLARLAADMRRGDMVALLARAIVDRDSSETWAREWAASRGFR--------VGGLSAAAGAVGGADVGAEEEE 923
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1330.2069.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVK0_ECTSI1.250e-2542.94Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
A0A6H5KV34_9PHAE1.210e-2137.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 123..152
e-value: 0.065
score: 22.4
coord: 88..117
e-value: 260.0
score: 9.3
coord: 38..68
e-value: 0.029
score: 23.5
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 40..65
e-value: 0.0043
score: 17.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 88..120
score: 8.549
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 123..155
score: 10.286
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 22..186
e-value: 9.7E-21
score: 76.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 37..153
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 93..182
e-value: 5.3E-7
score: 30.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 38..155
score: 18.351
NoneNo IPR availablePANTHERPTHR24193:SF116ADA2A-CONTAINING COMPLEX COMPONENT 3, ISOFORM Dcoord: 39..204
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 39..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1330contigH-paniculata_contig1330:4365..6626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1330.2069.1mRNA_H-paniculata_contig1330.2069.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1330 4292..7904 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1330.2069.1 ID=prot_H-paniculata_contig1330.2069.1|Name=mRNA_H-paniculata_contig1330.2069.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=248bp
MENGTTQVQVTPCPQSCYRQGKEIKRAENPQGGAEIYDSFTPLHHACRVV
GGVDVVEVLLGAGADADGLAGREANVSAAGPGVQCPGCSVRPLHIAAAHG
NATVVRALTWKGCRLDAETPDPSRSTPLALAVQGGHLEATRALVEAGASI
QAVPRREDGTQLAPSLARMAARMKRGDLVSVLTAALVKRDCAESWIIEWA
SEVNGKSPEQVIGTAGGIGANGSEAGGVETGEDEEQQEAVKNGSLCS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom