mRNA_H-paniculata_contig1328.2048.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1328.2048.1 vs. uniprot
Match: D7FMQ9_ECTSI (Aquarius intron-binding protein similar to aquarius n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ9_ECTSI) HSP 1 Score: 186 bits (473), Expect = 7.170e-49 Identity = 91/127 (71.65%), Postives = 104/127 (81.89%), Query Frame = 1
Query: 106 GGLVTVSEVLEDELMMVAAKNWRNDSIAVAKGIFKPRLVSEIYRQELRSCSPYPGKSVGPESSSRLQLLELSMYLENYLWPNFCPKRSTAEHMMSAILLINAKFHEGVSVWEALGISEGRMGVLPPT 486
GGLVT++E+ EDELM VA +NW S A AKG FKP+LVS IYR+ELRSC P PG GPESSSRLQLLE S +LENYLWPNF K+S+ EH+MS ILLIN+KFHEGVSVWE+LGISEGR+G LP T
Sbjct: 318 GGLVTITEINEDELMAVANQNWAPGSKAAAKGSFKPKLVSTIYRKELRSCMPTPGARAGPESSSRLQLLEFSAFLENYLWPNFDAKKSSTEHLMSTILLINSKFHEGVSVWESLGISEGRLGNLPVT 444
BLAST of mRNA_H-paniculata_contig1328.2048.1 vs. uniprot
Match: A0A8J4B3V0_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4B3V0_9CHLO) HSP 1 Score: 106 bits (264), Expect = 2.370e-21 Identity = 55/112 (49.11%), Postives = 73/112 (65.18%), Query Frame = 1
Query: 106 GGLVTVSEVLEDELMMVAAKNWRNDSIAV-AKGIFKPRLVSEIYRQELRSCSPYPGKSVGPESSSRLQLLELSMYLENYLWPNFCPKRSTAEHMMSAILLINAKFHEGVSVW 438
G L+TV+E++ D+L +A KNW N + A FKP+LVS IYR+EL G S+ S R+ LLE+S YLENYLWPNF P+ +T EH+MS +L++N KF E V W
Sbjct: 80 GSLLTVAEIVTDKLTRIARKNWSNAARARDPPPAFKPKLVSSIYREELG------GASMRGPSFKRVMLLEVSQYLENYLWPNFDPETATFEHVMSIVLMVNEKFRENVPAW 185
BLAST of mRNA_H-paniculata_contig1328.2048.1 vs. uniprot
Match: A0A7J7D8P8_TRIWF (Intron-binding protein aquarius-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7D8P8_TRIWF) HSP 1 Score: 95.9 bits (237), Expect = 3.860e-20 Identity = 48/108 (44.44%), Postives = 64/108 (59.26%), Query Frame = 1
Query: 115 VTVSEVLEDELMMVAAKNWRNDSIAVAKGIFKPRLVSEIYRQELRSCSPYPGKSVGPESSSRLQLLELSMYLENYLWPNFCPKRSTAEHMMSAILLINAKFHEGVSVW 438
+T+SE+ D L +AA NW + F P LV EIY+ EL S + P R+ +LE+S YLENYLWPNF P+ +T EH+MS IL++N KF E V+ W
Sbjct: 46 ITLSEIQHDRLTQIAASNWMTTNDEEPTKPFDPELVKEIYKTELLVTSGWK-----PVPLQRVMILEVSQYLENYLWPNFDPEIATFEHVMSMILMVNEKFRENVAAW 148
BLAST of mRNA_H-paniculata_contig1328.2048.1 vs. uniprot
Match: D8TS23_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TS23_VOLCA) HSP 1 Score: 102 bits (254), Expect = 4.680e-20 Identity = 59/140 (42.14%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 106 GGLVTVSEVLEDELMMVAAKNWRNDSIAV-AKGIFKPRLVSEIYRQELRSCSPYPGKSVGPESSSRLQLLELSMYLENYLWPNFCPKRSTAEHMMSAILLINAKFHEGVSVW---------------EALGISEGRMGVL 477
G L+TV+E++ D+L +A +NW N + A FKP+LVS IYR EL + GP S R+ LLE+S YLENYLWPNF P+ +T EH+MS +L++N KF E + W L + EGR G L
Sbjct: 109 GSLLTVAEIVTDKLTKLAQRNWSNAARARHPPPTFKPKLVSSIYRDELGGAG-----TRGP-SFKRVMLLEVSQYLENYLWPNFDPETATFEHVMSIVLMVNEKFRENIPAWACFHTREDAFPGFFKRVLSLKEGREGKL 242
BLAST of mRNA_H-paniculata_contig1328.2048.1 vs. uniprot
Match: A0A498KD47_MALDO (Aquarius_N domain-containing protein n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498KD47_MALDO) HSP 1 Score: 93.6 bits (231), Expect = 2.910e-19 Identity = 50/109 (45.87%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 115 VTVSEVLEDELMMVAAKNWRND-SIAVAKGIFKPRLVSEIYRQELRSCSPYPGKSVGPESSSRLQLLELSMYLENYLWPNFCPKRSTAEHMMSAILLINAKFHEGVSVW 438
+T+ ++ D L M+AA NW + K F P LV+EIYR EL S ++V S R+ +LE+S YLENYLWPNF P+ +T EH+MS IL++N KF E V+ W
Sbjct: 38 ITLLDIQRDRLTMIAADNWSKTLDASQPKKPFDPELVNEIYRTEL-SVGEGQRRAV---PSQRVMILEVSQYLENYLWPNFDPETATFEHVMSMILIVNEKFRENVAAW 142
BLAST of mRNA_H-paniculata_contig1328.2048.1 vs. uniprot
Match: A0A7S3R311_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R311_DUNTE) HSP 1 Score: 99.8 bits (247), Expect = 3.650e-19 Identity = 53/117 (45.30%), Postives = 68/117 (58.12%), Query Frame = 1
Query: 115 VTVSEVLEDELMMVAAKNWRNDSIAV-AKGIFKPRLVSEIYRQELRSCSPYPGKSVGPESSSRLQLLELSMYLENYLWPNFCPKRSTAEHMMSAILLINAKFHEGVSVWEALGISEG 462
+TV E+ +D+L A K W +I+ A F+P LV+ IYR EL G P S R+ LLE+S +LENYLWPNF P +T EH+MS IL++N KF EGV W EG
Sbjct: 41 LTVKEIHQDKLTQTAQKQWSTKAISSKAPPAFQPELVASIYRDELA------GARDEPPSLKRVMLLEVSQFLENYLWPNFDPATATFEHLMSIILMVNEKFREGVPAWTCFHTREG 151
BLAST of mRNA_H-paniculata_contig1328.2048.1 vs. uniprot
Match: A0A835YQ44_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ44_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 6.330e-19 Identity = 48/107 (44.86%), Postives = 69/107 (64.49%), Query Frame = 1
Query: 154 VAAKNWRNDSIAVA-KGIFKPRLVSEIYRQELRSCSPYPGKSVGPESSSRLQLLELSMYLENYLWPNFCPKRSTAEHMMSAILLINAKFHEGVSVWEALGISEGRMG 471
+A +NW + A K P LV++IY++EL SC P PG+ ++ RLQLLE++ YLENYLWP+F +S+ H+MS +L+ N KF G S W+A+G+ EG G
Sbjct: 1 LAHQNWAAGAPENACKNTISPSLVTKIYKEELHSCGPGPGRRAAANANRRLQLLEVTSYLENYLWPHFHATKSSLPHVMSIVLMANEKFARGFSFWDAVGV-EGAGG 106
BLAST of mRNA_H-paniculata_contig1328.2048.1 vs. uniprot
Match: A0A328DRQ3_9ASTE (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328DRQ3_9ASTE) HSP 1 Score: 99.0 bits (245), Expect = 6.570e-19 Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 1
Query: 115 VTVSEVLEDELMMVAAKNWRNDSIAVAKGIFKPRLVSEIYRQELRSCSPYPGKSVGPESSSRLQLLELSMYLENYLWPNFCPKRSTAEHMMSAILLINAKFHEGVSVW 438
+T+SE+ D L +AA NW N + AK F LV+EIY EL + G+ P R+ +LE+S YLENYLWPNF P+ ST EH+MS IL++N KF E V+ W
Sbjct: 51 ITLSEIQRDRLTKIAAANWSNTAAPAAKKPFDANLVNEIYYTEL---TVKGGRK--PVPLQRVMILEVSQYLENYLWPNFDPENSTFEHVMSMILMVNEKFRENVAAW 153
BLAST of mRNA_H-paniculata_contig1328.2048.1 vs. uniprot
Match: A0A022PUZ4_ERYGU (Aquarius_N domain-containing protein (Fragment) n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022PUZ4_ERYGU) HSP 1 Score: 92.4 bits (228), Expect = 7.580e-19 Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = 1
Query: 115 VTVSEVLEDELMMVAAKNWRNDSIAVAKGIFKPRLVSEIYRQELRSCSPYPGKSVGPESSSRLQLLELSMYLENYLWPNFCPKRSTAEHMMSAILLINAKFHEGVSVW 438
+T+ E+ +D L +AA+NW + + K F P LV+EIY EL + G+ P R+ +LE+S YLENYLWPNF P+ ++ EH+MS IL++N KF E V+ W
Sbjct: 46 MTLIEIQKDRLTKIAAENWAKTADSGPKKPFSPDLVNEIYYTEL---TVKAGRK--PVPLQRVMILEVSQYLENYLWPNFSPETASFEHVMSMILMVNEKFRENVAAW 148
BLAST of mRNA_H-paniculata_contig1328.2048.1 vs. uniprot
Match: A0A7J7CHT2_TRIWF (Intron-binding protein aquarius n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CHT2_TRIWF) HSP 1 Score: 98.2 bits (243), Expect = 1.190e-18 Identity = 52/108 (48.15%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 115 VTVSEVLEDELMMVAAKNWRNDSIAVAKGIFKPRLVSEIYRQELRSCSPYPGKSVGPESSSRLQLLELSMYLENYLWPNFCPKRSTAEHMMSAILLINAKFHEGVSVW 438
+T+SE+ D L +AA NW S K F P LV EIY EL S G+ P R+ +LE+S YLENYLWPNF P+ +T EH+MS IL+IN KF E V+ W
Sbjct: 46 MTLSEIQRDRLTQIAASNWMTTSEEEQKKPFDPELVKEIYETELLVTS---GRK--PVPLQRVMILEVSQYLENYLWPNFDPETATFEHVMSMILMINEKFRENVAAW 148 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1328.2048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1328.2048.1 >prot_H-paniculata_contig1328.2048.1 ID=prot_H-paniculata_contig1328.2048.1|Name=mRNA_H-paniculata_contig1328.2048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=344bp MNGSGKEPRAASGAAAAAAAAAAGTKRKRGGLVTVSEVLEDELMMVAAKNback to top mRNA from alignment at H-paniculata_contig1328:9084..11828- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1328.2048.1 ID=mRNA_H-paniculata_contig1328.2048.1|Name=mRNA_H-paniculata_contig1328.2048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2745bp|location=Sequence derived from alignment at H-paniculata_contig1328:9084..11828- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1328:9084..11828- >mRNA_H-paniculata_contig1328.2048.1 ID=mRNA_H-paniculata_contig1328.2048.1|Name=mRNA_H-paniculata_contig1328.2048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2064bp|location=Sequence derived from alignment at H-paniculata_contig1328:9084..11828- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |