prot_H-paniculata_contig1327.2042.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1327.2042.1
Unique Nameprot_H-paniculata_contig1327.2042.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length136
Homology
BLAST of mRNA_H-paniculata_contig1327.2042.1 vs. uniprot
Match: A0A6H5K085_9PHAE (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K085_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 7.720e-78
Identity = 119/122 (97.54%), Postives = 121/122 (99.18%), Query Frame = 0
Query:   15 ELDALDIENVQKETIHPRKSYKMNSSCADALLFAAYKWTISKPSLLHDTKDQYDGTTSNKYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNMSIYPSPCGVLIGIDLAYNLYSGYGNWFPG 136
            ELDALDIENVQKETIHPRKSYKMNSSCADALLFAAYKWTISKPSLLHDTKDQYDGTTSNKYWIDVQLRWGDFDSHD+ERYARAKFLDYTTDNMSIYPSPCGVL+ IDLAYNLYSGYGNWFPG
Sbjct: 1707 ELDALDIENVQKETIHPRKSYKMNSSCADALLFAAYKWTISKPSLLHDTKDQYDGTTSNKYWIDVQLRWGDFDSHDVERYARAKFLDYTTDNMSIYPSPCGVLVAIDLAYNLYSGYGNWFPG 1828          
BLAST of mRNA_H-paniculata_contig1327.2042.1 vs. uniprot
Match: A0A836C932_9STRA (NUC071 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C932_9STRA)

HSP 1 Score: 248 bits (634), Expect = 8.420e-74
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 0
Query:   15 ELDALDIENVQKETIHPRKSYKMNSSCADALLFAAYKWTISKPSLLHDTKDQYDGTTSNKYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNMSIYPSPCGVLIGIDLAYNLYSGYGNWFPG 136
            ELDALDIENVQKETIHPRKSYKMNSSCAD LLFA+YKW +SKPSLLHDT D YDGTTSNKYW+D+QLRWGDFDSHD+ERYARAK+LDYTTDNMSIYPSPCGVLI IDLAYNLYSGYGNWFPG
Sbjct: 1646 ELDALDIENVQKETIHPRKSYKMNSSCADVLLFASYKWQVSKPSLLHDTSDAYDGTTSNKYWLDIQLRWGDFDSHDVERYARAKYLDYTTDNMSIYPSPCGVLIAIDLAYNLYSGYGNWFPG 1767          
BLAST of mRNA_H-paniculata_contig1327.2042.1 vs. uniprot
Match: A0A1I8B178_MELHA (Uncharacterized protein n=1 Tax=Meloidogyne hapla TaxID=6305 RepID=A0A1I8B178_MELHA)

HSP 1 Score: 227 bits (579), Expect = 5.220e-73
Identity = 109/140 (77.86%), Postives = 119/140 (85.00%), Query Frame = 0
Query:    1 MAEDSRVCRHGLVS----ELDALDIENVQKETIHPRKSYKMNSSCADALLFAAYKWTISKPSLLHDTKDQYDGTTSNKYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNMSIYPSPCGVLIGIDLAYNLYSGYGNWFPG 136
            MAEDSRV  +  VS    ELD L+I+ VQKETIHPRKSYKMNSSCAD LLFA YKW IS+PSLL DTKD  D TT+ K+W+DVQLRWGD+DSHDIERY+RAKFLDYTTDNMSIYPSP G+LI IDLAYNLYS YGNWFPG
Sbjct:    1 MAEDSRVSCNEFVSSFYLELDPLEIQTVQKETIHPRKSYKMNSSCADILLFAQYKWHISRPSLLADTKDVMDNTTTQKFWLDVQLRWGDYDSHDIERYSRAKFLDYTTDNMSIYPSPNGILIAIDLAYNLYSAYGNWFPG 140          
BLAST of mRNA_H-paniculata_contig1327.2042.1 vs. uniprot
Match: A0A7S3Y066_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y066_HETAK)

HSP 1 Score: 244 bits (623), Expect = 2.530e-72
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0
Query:   15 ELDALDIENVQKETIHPRKSYKMNSSCADALLFAAYKWTISKPSLLHDTKDQYDGTTSNKYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNMSIYPSPCGVLIGIDLAYNLYSGYGNWFPG 136
            ELDAL+IENVQKETIHPRKSYKMNSSCAD LLFAAYKW ++KPSLLHDTKD YDGTT+NKYW+DVQLRWGDFDSHD+ERYARAKFLDYTTDNMSIYPSP GVL+ +DLAYNLYSGYGNWFPG
Sbjct: 1195 ELDALEIENVQKETIHPRKSYKMNSSCADVLLFAAYKWQVAKPSLLHDTKDAYDGTTTNKYWLDVQLRWGDFDSHDVERYARAKFLDYTTDNMSIYPSPTGVLLAVDLAYNLYSGYGNWFPG 1316          
BLAST of mRNA_H-paniculata_contig1327.2042.1 vs. uniprot
Match: A0A7S3LI28_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LI28_9STRA)

HSP 1 Score: 225 bits (573), Expect = 3.300e-72
Identity = 102/125 (81.60%), Postives = 111/125 (88.80%), Query Frame = 0
Query:   12 LVSELDALDIENVQKETIHPRKSYKMNSSCADALLFAAYKWTISKPSLLHDTKDQYDGTTSNKYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNMSIYPSPCGVLIGIDLAYNLYSGYGNWFPG 136
            L  ELD+L+IENVQKETIHPRKSYKMNSSCAD LL A+YKW ISK SLLHD +D Y+  +S KYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNM++YPSP GV+I  DLAYNLYSGYGNWFPG
Sbjct:   32 LDQELDSLEIENVQKETIHPRKSYKMNSSCADVLLLASYKWQISKASLLHDNRDSYESISSTKYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNMTLYPSPTGVIIAFDLAYNLYSGYGNWFPG 156          
BLAST of mRNA_H-paniculata_contig1327.2042.1 vs. uniprot
Match: A0A7S2APL4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APL4_9STRA)

HSP 1 Score: 243 bits (620), Expect = 6.470e-72
Identity = 110/125 (88.00%), Postives = 118/125 (94.40%), Query Frame = 0
Query:   12 LVSELDALDIENVQKETIHPRKSYKMNSSCADALLFAAYKWTISKPSLLHDTKDQYDGTTSNKYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNMSIYPSPCGVLIGIDLAYNLYSGYGNWFPG 136
            L  ELDAL+IENVQKETIHPRKSYKMNSSCAD LLFAAYKW ++KP+LLHDTKD YDGTT+NKYWIDVQLRWGDFDSHD+ERY+RAKFLDYTTDNMSIYPSP GVL+ IDLAYNLYSGYGNWFPG
Sbjct: 1943 LDQELDALEIENVQKETIHPRKSYKMNSSCADILLFAAYKWQVAKPALLHDTKDAYDGTTTNKYWIDVQLRWGDFDSHDVERYSRAKFLDYTTDNMSIYPSPTGVLLAIDLAYNLYSGYGNWFPG 2067          
BLAST of mRNA_H-paniculata_contig1327.2042.1 vs. uniprot
Match: A0A183EXF4_9BILA (PRP8_domainIV domain-containing protein n=1 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A183EXF4_9BILA)

HSP 1 Score: 222 bits (565), Expect = 1.550e-71
Identity = 100/122 (81.97%), Postives = 110/122 (90.16%), Query Frame = 0
Query:   15 ELDALDIENVQKETIHPRKSYKMNSSCADALLFAAYKWTISKPSLLHDTKDQYDGTTSNKYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNMSIYPSPCGVLIGIDLAYNLYSGYGNWFPG 136
            ELDAL+I+ VQKETIHPRKSYKMNSSCAD LLFA YKW +S+PSLL D+KD  D TT+ KYW+D+QLRWGD+DSHD+ERYARAKFLDYTTDNMSIYPSP GVLI IDLAYNLYS YGNWFPG
Sbjct:   10 ELDALEIQTVQKETIHPRKSYKMNSSCADILLFAQYKWHVSRPSLLADSKDVMDNTTTQKYWLDIQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLYSAYGNWFPG 131          
BLAST of mRNA_H-paniculata_contig1327.2042.1 vs. uniprot
Match: A0A1B6LFS8_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Ecdysozoa TaxID=1206794 RepID=A0A1B6LFS8_9HEMI)

HSP 1 Score: 226 bits (576), Expect = 1.470e-70
Identity = 104/122 (85.25%), Postives = 111/122 (90.98%), Query Frame = 0
Query:   15 ELDALDIENVQKETIHPRKSYKMNSSCADALLFAAYKWTISKPSLLHDTKDQYDGTTSNKYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNMSIYPSPCGVLIGIDLAYNLYSGYGNWFPG 136
            ELDAL+IE VQKETIHPRKSYKMNSSCAD LLFAAYKW +S+PSLL D+KD  D TT+ KYWIDVQLRWGD+DSHDIERYARAKFLDYTTDNMSIYPSP GVLI IDLAYNL+S YGNWFPG
Sbjct:   29 ELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSKDTMDNTTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPG 150          
BLAST of mRNA_H-paniculata_contig1327.2042.1 vs. uniprot
Match: A0A8J2WY90_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY90_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.940e-70
Identity = 106/122 (86.89%), Postives = 115/122 (94.26%), Query Frame = 0
Query:   15 ELDALDIENVQKETIHPRKSYKMNSSCADALLFAAYKWTISKPSLLHDTKDQYDGTTSNKYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNMSIYPSPCGVLIGIDLAYNLYSGYGNWFPG 136
            ELDAL++ENVQKETIHPRKSYKMNSSCAD LLFAAYKW ++KPSLLHDTKD YDGTTS+KYW+D+QLRWGDFDSHD+ERYARAKFLDYTTDNMSIYPSP G L+ IDLAYNLYSGYG WFPG
Sbjct: 1123 ELDALEVENVQKETIHPRKSYKMNSSCADILLFAAYKWQVAKPSLLHDTKDSYDGTTSSKYWLDIQLRWGDFDSHDVERYARAKFLDYTTDNMSIYPSPTGALVAIDLAYNLYSGYGAWFPG 1244          
BLAST of mRNA_H-paniculata_contig1327.2042.1 vs. uniprot
Match: A0A484DSE3_BRELC (MPN domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSE3_BRELC)

HSP 1 Score: 239 bits (609), Expect = 1.950e-70
Identity = 107/122 (87.70%), Postives = 116/122 (95.08%), Query Frame = 0
Query:   15 ELDALDIENVQKETIHPRKSYKMNSSCADALLFAAYKWTISKPSLLHDTKDQYDGTTSNKYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNMSIYPSPCGVLIGIDLAYNLYSGYGNWFPG 136
            ELDAL+IENVQKETIHPRKSYKMNSSCAD LLFAAYKW + +P+LLHDTKD YDG+TS+KYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNM+IYPSP GVL+ +DLAYNLYSGYGNWFPG
Sbjct: 1614 ELDALEIENVQKETIHPRKSYKMNSSCADVLLFAAYKWQMGRPTLLHDTKDSYDGSTSSKYWIDVQLRWGDFDSHDIERYARAKFLDYTTDNMTIYPSPTGVLLAVDLAYNLYSGYGNWFPG 1735          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1327.2042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K085_9PHAE7.720e-7897.54MPN domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836C932_9STRA8.420e-7490.98NUC071 domain-containing protein n=1 Tax=Tribonema... [more]
A0A1I8B178_MELHA5.220e-7377.86Uncharacterized protein n=1 Tax=Meloidogyne hapla ... [more]
A0A7S3Y066_HETAK2.530e-7289.34Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3LI28_9STRA3.300e-7281.60Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
A0A7S2APL4_9STRA6.470e-7288.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A183EXF4_9BILA1.550e-7181.97PRP8_domainIV domain-containing protein n=1 Tax=Go... [more]
A0A1B6LFS8_9HEMI1.470e-7085.25Uncharacterized protein (Fragment) n=2 Tax=Ecdysoz... [more]
A0A8J2WY90_9STRA1.940e-7086.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A484DSE3_BRELC1.950e-7087.70MPN domain-containing protein n=1 Tax=Bremia lactu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1570.40coord: 6..136
e-value: 9.4E-65
score: 219.7
IPR027652Pre-mRNA-processing-splicing factor 8PANTHERPTHR11140PRE-MRNA SPLICING FACTOR PRP8coord: 13..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1327contigH-paniculata_contig1327:25176..27247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1327.2042.1mRNA_H-paniculata_contig1327.2042.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1327 1271..27247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1327.2042.1 ID=prot_H-paniculata_contig1327.2042.1|Name=mRNA_H-paniculata_contig1327.2042.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp
MAEDSRVCRHGLVSELDALDIENVQKETIHPRKSYKMNSSCADALLFAAY
KWTISKPSLLHDTKDQYDGTTSNKYWIDVQLRWGDFDSHDIERYARAKFL
DYTTDNMSIYPSPCGVLIGIDLAYNLYSGYGNWFPG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027652PRP8