mRNA_H-paniculata_contig13257.2035.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13257.2035.1
Unique NamemRNA_H-paniculata_contig13257.2035.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig13257.2035.1 vs. uniprot
Match: D7FJT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJT4_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 7.890e-94
Identity = 235/462 (50.87%), Postives = 266/462 (57.58%), Query Frame = 2 
Query:  320 MNSLVSMGKC-RGENTGGSRFPSSRQVRCARVATGRSVLLPRNCHDPSSAPATGSVV-DAVGRFSRMASTAVLMLVLMGNNTSARSSCWREASQHXXXXXXXXRETTPWTAFAPPPLS-PHARSYGGGGIGSAATSTTARGSRRPRMASLGAVLESRRARALSKTSGVSVPTAVAGDAKNARELPAAHLFSVQRNTQGSQQRLPFPTPELGRGSVGRGAGDGLQSPRFA---VPGEGRSYPERLSVSVGRAGEGASAAAVEGSRKEDVFVTAGGTGRPALPELSAEELTQLQAGQRVQKQTREGGAGSGSVVVDVRADPDVVLEYLTKYNDFATMIDTVRECEVFPSDFDAQ-RKVEVTVXXXXXXXXXLMTLDRERQIVQFELDPDCTKAGRAVLREATGFFFVESPPDRPGYSRVWMLAKVDVNRFVPGAIVDYAASRALPRASNWIKPTCEAAQRRKLR 1684
            MNS +S G   R   +G  R  +S   R A+   GRS    R+CH  SS    G+VV DA G  +R+A  AV+ LVL+G+N+SARSS   +    XXXXXXXX     W  FAP   S P  R         AA S   +  RR R+A   +V     A+    T G S                     S +   Q  Q    F   + G    GR + + LQSPR A         S                S A   G       V   G GRPALP L  E+LTQL+AGQRVQKQTR+GG+GSGSVVVDVRADPDVVL  LTKY D+A MIDTVRECEVFP    A  RKV V V         +M+L RER +VQFELDPDCTKAGRAVLREATGFF+VESPPDRPG+SRVWMLAKVDVNRFVPGAIVDYAA RALPRASNWIKPTCEAAQRRKLR
Sbjct:    1 MNSSLSQGVLPRRAKSGSRRAVTSSSSRTAQSYGGRSTAF-RSCHSSSSGRRRGAVVGDAFGTCTRVACAAVIALVLLGDNSSARSSLPSDXXXXXXXXXXXXXXMA-WQLFAPKARSSPSER---------AAASLNLK--RRTRLAGADSVSAVSPAQMYRVTEGSS---------------------SGRGRGQRRQHEQRFSRDDSGGREDGRSSIEALQSPRSAELLTAYASASXXXXXXXXXXXXXRPPSIAECIGGG-----VVTQGEGRPALPLLDDEDLTQLRAGQRVQKQTRQGGSGSGSVVVDVRADPDVVLGLLTKYEDYAEMIDTVRECEVFPQGETADSRKVGVMVSRFKLHIRVVMSLLRERNMVQFELDPDCTKAGRAVLREATGFFYVESPPDRPGFSRVWMLAKVDVNRFVPGAIVDYAAGRALPRASNWIKPTCEAAQRRKLR 423
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BLAST of mRNA_H-paniculata_contig13257.2035.1 vs. uniprot
Match: A0A835ZLE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE1_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.840e-44
Identity = 95/199 (47.74%), Postives = 123/199 (61.81%), Query Frame = 2 
Query: 1130 RPA-LPELSAEELTQLQAGQRVQKQTREGGAGSGSVVVDVRADPDVVLEYLTKYNDFATMIDTVRECEVFPSDFDAQRKVEVTVXXXXXXXXXLMTLDRERQIVQFELDPDCTKAGRAVLREATGFFFVESPPD-RPGYSRVWMLAKVDVNRFVPGAIVDYAASRALPRASNWIKPTCEAAQRRKLREGMTGKGVATAA 1720
            RPA LPEL+ EE   L  G+RVQ+QTR+G +G+G VVVDVRAD    +E L  +  +  MIDTVRE  +         K E  +         L+  +     V+FELDPDC  AG++VL +A G ++VE PPD RPG+ R+W++A + V+  VPG +VDYAA+RALPRAS W+KPTCE  QR   REG      A AA
Sbjct:   16 RPAFLPELTLEEKRTLARGERVQRQTRQGSSGTGLVVVDVRADAATAMEVLQSFAAYGDMIDTVREARIL-GQRGGVTKAEFLISRFKLRVRVLLKSNPAASTVEFELDPDCKAAGKSVLNDARGIWYVERPPDCRPGHCRIWLVASLVVSGLVPGFLVDYAAARALPRASTWLKPTCERVQRSHEREGRRHLLNAVAA 213
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BLAST of mRNA_H-paniculata_contig13257.2035.1 vs. uniprot
Match: A0A6S9HUN1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HUN1_HETAK)

HSP 1 Score: 139 bits (349), Expect = 1.180e-32
Identity = 78/184 (42.39%), Postives = 107/184 (58.15%), Query Frame = 2 
Query: 1130 RPALPELSAEELTQLQAGQRVQKQTREGGAGSGSVVVDVRADPDVVLEYLTKYNDFATMIDTVRECEVFPSDFDAQRKVEVTVXXXXXXXXXLMTLDRERQIVQFELDPDCTKAGRAVLREATGFFFVESPPDRPG-YSRVWMLAKVDVNRFVPGAIVDYAASRALPRASNWIKPTCEAAQRRK 1678
            RP LPEL+++E  QL+AG+R+Q+Q R G  G G   VDVRA  + V   LT Y  +   I T+R+  VF S   A  K E  +         +M  + E   + F+LDPDC K    V + A GF+F E  P R   ++RVW+   V+VNR VPG +VD  A +ALP++SNW+KP  EA +RR+
Sbjct:  102 RPDLPELTSDEERQLRAGERIQRQNRVGKKGDGFACVDVRASLETVWATLTDYRRYPGRISTIRDAIVFSSSPQAT-KAEFMISRFRFPVRAIMRYEPEASRLAFDLDPDC-KVPPGVFKSAAGFWFAEPAPGREATHTRVWIAGAVEVNRAVPGFVVDLGAQKALPKSSNWVKPVMEAEERRR 283
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BLAST of mRNA_H-paniculata_contig13257.2035.1 vs. uniprot
Match: A0A7S2C392_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C392_9STRA)

HSP 1 Score: 125 bits (315), Expect = 3.820e-28
Identity = 74/181 (40.88%), Postives = 104/181 (57.46%), Query Frame = 2 
Query: 1136 ALPELSAEELTQLQAGQRVQKQTREGGAGSGSVVVDVRADPDVVLEYLTKYNDFATMIDTVRECEVFPSDFDAQRKVEVTVXXXXXXXXXLMTLDRERQIVQFELDPDCTKAGRAVLREATGFFFVESPPD--RPGYSRVWMLAKVDVNRFVPGAIVDYAASRALPRASNWIKPTCEAAQR 1672
            ALP L+  +L  L+AG  VQKQTR+G  GSG V +DV+A P+ V   LT Y  + ++IDTVR   V P       +   T+         +   + + Q + FEL+        AVL+EA G +FVE+  +  R G+ RVW+ A + V+R VP  IVDYAA RALPRA++W++P  E  Q+
Sbjct:  106 ALPALTGNDLRCLRAGLSVQKQTRDGWVGSGCVAMDVKASPEAVWSLLTDYASYDSLIDTVRAAIVQPGATKEDARATFTLSKFRLKTAVVHRFNHDTQQLTFELEEG---GENAVLKEANGLWFVETEGEGLRDGHVRVWLQASLRVSRVVPKWIVDYAARRALPRATSWLRPAAEEKQK 283
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BLAST of mRNA_H-paniculata_contig13257.2035.1 vs. uniprot
Match: A0A7S4M0K0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4M0K0_GUITH)

HSP 1 Score: 125 bits (314), Expect = 1.610e-27
Identity = 76/188 (40.43%), Postives = 110/188 (58.51%), Query Frame = 2 
Query: 1103 VFVTAGGTGRPALPELSAEELTQLQAGQRVQKQTREGGAGSGSVVVDVRADPDVVLEYLTKYNDFATMIDTVRECEVFPSDFDAQR-KVEVTVXXXXXXXXXLMTLDRERQIVQFELDPDCTKAGRAVLREATGFFFVESPPDRP-GYSRVWMLAKVDVNRFVPGAIVDYAASRALPRASNWIKPTCE 1660
            +F  A    RP LP LS  E+++L AG RV+KQ+R G  G G VVVDV+AD   V+  L+    +   I TVRE  + P    + R K    +          ++L++ R +++F+LD   +  G +   EA GF+F+E  P+R  G++RVW+ AKV  +  +P  IVDYAASRALPRA++W+KP  E
Sbjct:  105 IFPAAERPRRPPLPRLSDAEVSRLLAGDRVEKQSRSGLLGEGLVVVDVKADIPTVMAVLSDVERYPQRIATVREATIIPGTRSSVRCKARFKLSRFRLEVTADLSLNKFRNMLEFQLDR--SGMGSSAFDEARGFWFLEQCPEREEGWTRVWLSAKVRCSPLLPPFIVDYAASRALPRATSWLKPVIE 290
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BLAST of mRNA_H-paniculata_contig13257.2035.1 vs. uniprot
Match: A0A7S0H7N8_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H7N8_9CRYP)

HSP 1 Score: 124 bits (312), Expect = 2.210e-27
Identity = 75/188 (39.89%), Postives = 110/188 (58.51%), Query Frame = 2 
Query: 1103 VFVTAGGTGRPALPELSAEELTQLQAGQRVQKQTREGGAGSGSVVVDVRADPDVVLEYLTKYNDFATMIDTVRECEVFPSDFDAQR-KVEVTVXXXXXXXXXLMTLDRERQIVQFELDPDCTKAGRAVLREATGFFFVESPPDRP-GYSRVWMLAKVDVNRFVPGAIVDYAASRALPRASNWIKPTCE 1660
            +F  A    RP LP L+  E+++L AG RV+KQTR G  G G VVVDV+AD   V+  L+    +   I TVRE  + P    + R K    +          ++L++ R +++F+LD   +  G +   EA GF+F+E  P+R  G++RVW+ AKV  +  +P  IVDYAASRALPRA++W++P  E
Sbjct:   91 IFPAAERPRRPPLPRLTDAEVSRLLAGDRVEKQTRSGLLGEGLVVVDVKADVSTVMAVLSDVERYPQRIATVREALIIPGTRSSVRCKARFKLSRFRLEVTADLSLNKFRNMLEFQLDR--SGMGSSAFDEARGFWFLEQCPEREEGWTRVWLSAKVRCSPLLPPFIVDYAASRALPRATSWLRPVIE 276
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BLAST of mRNA_H-paniculata_contig13257.2035.1 vs. uniprot
Match: A0A7S2SKJ0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKJ0_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.100e-25
Identity = 73/208 (35.10%), Postives = 112/208 (53.85%), Query Frame = 2 
Query: 1118 GGTGRPA-LPELSAEELTQLQAGQRVQKQTREGGAGSGSVVVDVRADPDVVLEYLTKYNDFATMIDTVRECEVFPSDFDAQRKVEVTVXXXXXXXXXLMTLDRERQIVQFELDPDCTKAGRAVLREATGFFFVESPPD----RPGYSRVWMLAKVDVNRFVPGAIVDYAASRALPRASNWIKPTCEAAQRRKLREGMTGKGVATAAAP 1726
            G   +PA LP LS E++  L  G+ VQ+QTR+G  G+G VV+D+ A P+ V   L  +  +  MI TVR   + P     + +    +         +   DR RQ ++F LD   + +   V+++A GF++VE+P      +PG+ R+W  A + V+R VP  + DYAA RAL RA+ W++PT   A++  L     G   +T AAP
Sbjct:   26 GSFSKPAGLPRLSREDIGHLADGKIVQRQTRDGVTGNGFVVMDLEASPETVWSLLLDFERYPEMISTVRSAALRPGSTLERARATFVLSKFLLEVNVVHQFDRRRQQLRFCLD---SASQNFVMKQADGFWYVETPDVAEGLKPGHVRIWFGASIRVSRIVPRWVTDYAAQRALRRATAWLRPTITEAEKASL--DSVGVQQSTTAAP 228
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BLAST of mRNA_H-paniculata_contig13257.2035.1 vs. uniprot
Match: A0A7S1EJW5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EJW5_HEMAN)

HSP 1 Score: 119 bits (299), Expect = 6.550e-25
Identity = 72/174 (41.38%), Postives = 101/174 (58.05%), Query Frame = 2 
Query: 1148 LSAEELTQLQAGQRVQKQTREGGAGSGSVVVDVRADPDVVLEYLTKYNDFATMIDTVRECEVFPSDFDAQRKVEVTVXXXXXXXXXLMTLDRERQIVQFELDPDCTKAGRA-VLREATGFFFVESPPDRPG-YSRVWMLAKVDVNRFVPGAIVDYAASRALPRASNWIKPTCEA 1663
            L+ EE   L AG+RVQ+Q R+G  G+GSVVVDV+AD   V   LT    +   I TVR C +         K +  +         ++  DRE  +++FELD    K  RA ++ E+ GF+F+E  P R G Y+R+WM A +  +  +P  +VDYAA+RALPRA+ W+KPT EA
Sbjct:  219 LTPEEEATLLAGERVQRQERDGRVGTGSVVVDVKADISTVFAVLTDLERYVERIHTVRRCTITERGAMVA-KAQFALSRFNLVINTVLRCDREANMLRFELD----KERRAPMVNESEGFWFLEEAPGRGGEYTRIWMSAGIKCSSLLPTFLVDYAAARALPRATAWLKPTIEA 387
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BLAST of mRNA_H-paniculata_contig13257.2035.1 vs. uniprot
Match: W7U413_9STRA (Polyketide_cyc domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U413_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.310e-24
Identity = 77/176 (43.75%), Postives = 103/176 (58.52%), Query Frame = 2 
Query: 1139 LPELSAEELTQLQAGQRVQKQTREGGAGSGSVVVDVRADPDVVLEYLTKYNDFATMIDTVRECEVFPSDFDAQRKVEVTVXXXXXXXXXLMTLDRERQIVQFELDPDCTKAGRAVLREATGFFFVESPP-DRP-GYSRVWMLAKVDVNRFVPGAIVDYAASRALPRASNWIKPTCE 1660
            LP LS E+L  L+AGQRVQ Q R G  GSG VVVDV AD   V   L  +  +A MI T+R+ ++  S + +  K   T+         +     E   + F LDPDC +  R++L  A GF+++E  P DRP G++RV+M A V VN  VP  +VDYAA RAL RA++W+KP  E
Sbjct:  172 LPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKI-TSRWPSLTKGVFTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQY-RSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVE 345
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BLAST of mRNA_H-paniculata_contig13257.2035.1 vs. uniprot
Match: A0A813IW16_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IW16_POLGL)

HSP 1 Score: 110 bits (274), Expect = 7.490e-24
Identity = 70/180 (38.89%), Postives = 100/180 (55.56%), Query Frame = 2 
Query: 1139 LPELSAEELTQLQAGQRVQKQTREGGAGSGSVVVDVRADPDVVLEYLTKYNDFATMIDTVRECEVFPSDFDAQ----RKVEVTVXXXXXXXXXLMTLDRERQIVQFELDPDCTKAGRAVLREATGFFFVESPPDRP-GYSRVWMLAK-VDVNRFVPGAIVDYAASRALPRASNWIKPTCE 1660
            LP LS+EEL Q++ G++VQ+Q R G  G G VV+DV A  +V++  L  + D+  MI  VR   V      +      K +  +           +LDR    V+F+LD +     R VL+EA+G++FVE  PD P   SRVW+  + +  +  VP +IVDYAA RAL RA+ W+KP  E
Sbjct:    1 LPTLSSEELDQVRRGEQVQRQERVGPTGWGFVVMDVGAPSEVIMSCLEAFKDYPEMIPVVRRANVTSQGTTSTGLVTAKCDYRISKFFLPVSVEHSLDRSAGTVRFDLDEN---KSRLVLQEASGYWFVEQSPDGPPNTSRVWLCVQSLRASALVPWSIVDYAAERALRRATCWLKPVME 177
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13257.2035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJT4_ECTSI7.890e-9450.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZLE1_9STRA1.840e-4447.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9HUN1_HETAK1.180e-3242.39Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2C392_9STRA3.820e-2840.88Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4M0K0_GUITH1.610e-2740.43Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S0H7N8_9CRYP2.210e-2739.89Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S2SKJ0_9STRA2.100e-2535.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1EJW5_HEMAN6.550e-2541.38Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
W7U413_9STRA1.310e-2443.75Polyketide_cyc domain-containing protein n=3 Tax=M... [more]
A0A813IW16_POLGL7.490e-2438.89Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13257contigH-paniculata_contig13257:276..6391 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score320.9
Seed ortholog evalue1e-84
Seed eggNOG ortholog2880.D7FJT4
Hectar predicted targeting categoryother localisation
EggNOG OGs2E0V1@1,2S88H@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_010240.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size3163
Cds size1410
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13257.2035.1prot_H-paniculata_contig13257.2035.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13257 595..4957 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929048.9092474-UTR-H-paniculata_contig13257:275..5941622929048.9092474-UTR-H-paniculata_contig13257:275..594Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13257 276..594 +
1691480711.9678626-UTR-H-paniculata_contig13257:275..5941691480711.9678626-UTR-H-paniculata_contig13257:275..594Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13257 276..594 +
1622929049.120924-UTR-H-paniculata_contig13257:4957..63911622929049.120924-UTR-H-paniculata_contig13257:4957..6391Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13257 4958..6391 +
1691480712.0267394-UTR-H-paniculata_contig13257:4957..63911691480712.0267394-UTR-H-paniculata_contig13257:4957..6391Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13257 4958..6391 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929048.9636385-CDS-H-paniculata_contig13257:594..8431622929048.9636385-CDS-H-paniculata_contig13257:594..843Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13257 595..843 +
1691480711.9803958-CDS-H-paniculata_contig13257:594..8431691480711.9803958-CDS-H-paniculata_contig13257:594..843Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13257 595..843 +
1622929049.0104733-CDS-H-paniculata_contig13257:1770..25651622929049.0104733-CDS-H-paniculata_contig13257:1770..2565Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13257 1771..2565 +
1691480711.9928985-CDS-H-paniculata_contig13257:1770..25651691480711.9928985-CDS-H-paniculata_contig13257:1770..2565Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13257 1771..2565 +
1622929049.0298347-CDS-H-paniculata_contig13257:4591..49571622929049.0298347-CDS-H-paniculata_contig13257:4591..4957Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13257 4592..4957 +
1691480712.0118933-CDS-H-paniculata_contig13257:4591..49571691480712.0118933-CDS-H-paniculata_contig13257:4591..4957Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13257 4592..4957 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13257.2035.1

>prot_H-paniculata_contig13257.2035.1 ID=prot_H-paniculata_contig13257.2035.1|Name=mRNA_H-paniculata_contig13257.2035.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=470bp
MNSLVSMGKCRGENTGGSRFPSSRQVRCARVATGRSVLLPRNCHDPSSAP
ATGSVVDAVGRFSRMASTAVLMLVLMGNNTSARSSCWREASQHQHQHHHN
NRETTPWTAFAPPPLSPHARSYGGGGIGSAATSTTARGSRRPRMASLGAV
LESRRARALSKTSGVSVPTAVAGDAKNARELPAAHLFSVQRNTQGSQQRL
PFPTPELGRGSVGRGAGDGLQSPRFAVPGEGRSYPERLSVSVGRAGEGAS
AAAVEGSRKEDVFVTAGGTGRPALPELSAEELTQLQAGQRVQKQTREGGA
GSGSVVVDVRADPDVVLEYLTKYNDFATMIDTVRECEVFPSDFDAQRKVE
VTVSRFRLRIRVLMTLDRERQIVQFELDPDCTKAGRAVLREATGFFFVES
PPDRPGYSRVWMLAKVDVNRFVPGAIVDYAASRALPRASNWIKPTCEAAQ
RRKLREGMTGKGVATAAAP*
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mRNA from alignment at H-paniculata_contig13257:276..6391+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13257.2035.1 ID=mRNA_H-paniculata_contig13257.2035.1|Name=mRNA_H-paniculata_contig13257.2035.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6116bp|location=Sequence derived from alignment at H-paniculata_contig13257:276..6391+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCCTGGCAGTGATCAGGTATTTTTGTATGCCGCCAGGTTTTCTGCTCAC
GACGAAAAGCTTCTGACGGACATTTTGAATCTGGGTAAGCTTGGAGGTGG
CTGTGGCTCCACGACACAGAGAATCGCATCTAACAGTTGTTCCTCTCTTG
GGCCGCCAACTCCGCATCACTCCTGCCCTGCGAATCATAATCATTGTCCA
CGTGTACAAGTACTACCTAGGCTCGGCATCGCAAGTGCTCCCCGTTAATA
TTGCCTCTTCACAAGGGGAGTCGCTTTGCTTTCGAGGTGGACGTCTAGCT
TGCTCCACAGCTGCTTAGGATGAACTCATTGGTGTCAATGGGGAAATGTA
GGGGGGAAAATACTGGGGGAAGTCGATTTCCCTCCTCACGGCAAGTCCGC
TGCGCCAGGGTCGCTACTGGGCGGAGTGTTTTGCTTCCACGAAACTGTCA
TGATCCTTCTTCGGCTCCGGCAACGGGCAGCGTCGTCGATGCAGTCGGCA
GGTTCTCGAGAATGGCCTCTACAGCGGTATTAATGTTGGTGCTCATGGGG
AATAACACGTCAGCACGGGTGAGTACGGAGAGTGATAGGTGTTTCGACGG
CGGGGGGGGTCTCATGCTGGATCTGGTTTTTGTGAAGACTGAGATCATAC
ACCCTCGGTTTGTTGTGTGTGGACCTGTTGGGTAGCTGCAATTTTCAACC
GCTAACGAATGTGAGATACTCAACTACAGACCTACAGACGAGGTTGGGCC
GTTCATTGCTGGTCATTCGTTGCAAATCAGAGTATTGCTGTTGGGGAATT
CGGGGGTAAGTTTGCCATTTCTGCCTACAGCCGTAGCGTTCATCTGTCTC
TCTTTACCCCATTGTGATGCCCGTAGGACACTGCTGTACCTGTTACGGGT
ATTACTGCGAAATGCACATCATACTACTATCAATATACTCATATTTCTCA
TGTGCGACCCACGTTTCAGTGTAAAACAGAGAGTAAAAAATTGACTGTAT
TTTATCACTGACTGTCCCTTTTCACTGACTACAACAGCGTGTACAGTCAG
AAGAAACAGTAGAATATGTGTCGTCTCTTGTTTTAAGATTCTTCTTGTAC
TCCGGGGACGACATGTGCGCACCAGCAGCAGGCAGTCCCCCTTTTCACCT
TCGCGAAATACCACACACAGCCAGTTTGCGTGTGCTGCACGCATGAGTGT
TAATCTATACGATTTCCCAGCTCCTGATAGTTTCGTTGGAGTACTCGGCA
TGACGAACACGCCGATACAAATGTGACGGTTACGGTGTCGTCCAGATGTT
GTGTTCAGTGTGTATCGCCGGGTACAAATCTTGAAATCTCGCCCCTCCCC
CTCCATGCCCATAGTCCCCTGTAGTCTGCCAACCTCGTCAAAAAGACCCC
TTGCCGTTTCCCGTCCCCCAGCCCCCTCAATCGCTTAGTCCAATTTCGGC
CCCCCTGATTGATCTTCACCCATTTTCCGTCGTATCTTCATCCAGTCATC
ATGTTGGCGTGAAGCGTCACAACATCAGCATCAGCATCATCACAATAACA
GAGAGACTACACCATGGACAGCGTTCGCGCCGCCTCCATTATCACCCCAC
GCGCGCAGCTACGGCGGCGGTGGCATCGGATCCGCTGCGACATCGACAAC
CGCGAGAGGCTCGCGACGACCACGGATGGCCTCCCTTGGCGCCGTGCTCG
AGTCGCGCCGCGCTCGAGCACTCTCCAAGACGTCCGGCGTCTCGGTACCC
ACTGCTGTGGCCGGGGACGCGAAGAACGCGAGGGAATTGCCAGCGGCGCA
CCTATTCAGCGTACAGCGAAACACGCAGGGGTCTCAGCAGCGACTACCGT
TCCCTACGCCGGAGTTAGGGAGAGGGTCGGTCGGACGCGGGGCTGGGGAC
GGCCTTCAATCTCCGAGGTTTGCTGTTCCCGGGGAGGGGCGGAGTTATCC
CGAGAGGTTGTCGGTATCGGTGGGGAGGGCTGGGGAGGGCGCGTCGGCGG
CCGCAGTCGAGGGAAGCCGAAAGGAGGATGTGTTTGTCACTGCTGGGGGG
ACAGGGCGGCCGGCGTTGCCGGAGCTGAGTGCGGAGGAGTTGACCCAGTT
GCAGGCCGGGCAACGGGTGCAGAAGCAAACTCGGGAGGGGGGCGCGGGGA
GCGGAAGCGTAGTGGTGGACGTGCGGGCGGATCCGGACGTGGTATTGGAG
TATTTGACCAAGTATAATGACTTCGCAACCATGATCGATACCGTTAGGGA
GTGCGAGGTGTTCCCCAGCGATTTCGACGCCCAACGAAAGGTGAGGGAGG
ATGCACGCGTGGCTTGAGTTTTATTTAGTGCTGGTTGATAAATTAGGAGG
CCAACGAAGGTCCCTTTCCCTCTCTTGCCCTAAACGGTGTTATTGTTGAG
CTGATATTGAACTTTATATATGTAGGTCTACTTTCACATATTTTTTTGCT
ATGATGGGCCGAAAGATGGTGATGGACAGATGTGGGTTAGAGTTGGTGAT
ATTCCTGTGGTCCTGGTTAGTGGTGACGAGCTTTATTTATTCCATATATT
GTCACGATGGTTTCTGCAGTAAAAATCCCGAATCAGTCGCGTTCCAATGG
CCTAGTGTTTTGTGTTGATCGTGCATTCGTTTTCCACGAATAACACATTT
CATGTGATGGAGGCGATGGGTCCACCGTTGAGCACGGCAGGAGTTGGGCG
TGTGCTGACAGGATTCTGGCTATTGTAGTTCATGACGCGGTGATGATTCG
GTACCATGAATGACCCTTCTCGAATTGCGTGTTCCCGTGTGTCAGCGTAC
GTTTTTTTTGTTGATGGGTCAGGAGTCGGACCCCGGTAACGACCAAAACA
TAGGTTTTGTAACGACCATTTGTGACCACCAGATAGCTACAGAGTGCTCT
AGACTTTGGATTACGTCTTATCTTCTTTTCGATGCGGTTTTGCTGCTGAC
TTTTTTCTGGGATTCCCTGCGTCCAGAATAGAAATAATTCATAAGTTATC
GAAAAGGCCCAAAGAAAAATAACAAGCCATCAATTAAATCGGATGGCAGA
GTAGGGCAAAATATATCTTTTTAATCTGTTATGCGTGTTCCACCACGAGA
TCTTGAGGTACGCTAACTGTTTGGCACTGTCGCGGGTAGGATTTGACCTA
GGCGTGACGTTCTCTAGATCAAACACTGTGTACGTGTTGTAGTCAGCCGC
TTCCGCGAAGCGTGCTTCGAGATTTGGCGGGAAGGATTGTCACGATCTTA
GCCATCGTCATCCATAGATAGTGACGTTGGCAGTACGGGATAGCTTTTCA
ACAGCCGCTGAAATAGGTCGCTATCGCTAGGATTCCAGCTGGTGCTGGAG
GGCTGTAGTCCCACGGCCATCACCTCGGCATCGCGGATTAATCTCAGCTG
TGTATCAGCCGTCGTAAAGAGTGTTGTGTGTGAGGCGTGACGTGTACAGT
TTTTTTTTTAACCCTCGGAAGGCTAAGGCAGAAACCTTGATCCGATGCTG
CCATACCGAAGTATTTCTACATTTCCTTCAACAGAACAGAGTTGTTTGTT
CCTCTGCGGGGTAGGCGCCACTCCGGTTCGGCCGAACTAAGTAGGCAGTG
TGGGGATTACACCTACTAAAAAACCTTTGACTAGACTTCCAGGTGACGTG
TACGTGGTGCATGATATATCTGTTGATCGTACACTGTCATCGTGGTGTGA
CCCTCCGCTTGCGTTCTGCAAATCGTGCAACATGTAGAAAATGCAAGAGC
TGAAGTGTTCGTGCTCATTCCTCTAAATCGCTGTCTAAACAGTTTTTCCC
TGGTGAAGAGCGATTTTGATAAATCCTTGTTGGGTTGATTTGGTTGATTC
ATTAATTGTACGGGGCGTAGAACTTGTACCCTTCCCCCCCCCCAAGAGGT
GCAAATGGGCCCTTTTTTCGCCCACTTCGACCGTATTAGTGGGAGATCTG
GTGGGAGGGGGCGTCAAATCGGAAGCATGAATCTCCTCAAAGAATTTTCA
AAGATTGTTCTGCTAGGCATTTTTGCTCCAACAAAAGAGTCCAGTCTACC
GCGTCCCGACGAGAAGTTATCTTACTGACAATTCCCGACAACCCCAAACA
ATGCTCTGCCTATAGTGACCTTTTCTGACTGCGCACTATCGGTACACCAG
TAGGCTTCCCTGTTGTTCTCCCAAGATACCCGCCCCTTACCCCGTTCCCC
ACTCTCCTTTGCATTAACCTAGCAACTCGTACGCACTTGGTCCTTGTTGA
CAACCGCCGACAACATAACACAAGCTCTCCCCCCCCCTCCCTACAACCGC
CTCATTTGCTCTTCAGGTTGAGGTGACGGTGAGCCGGTTCAGATTACGCA
TTCGGGTTCTGATGACCCTGGACAGGGAGCGACAGATTGTGCAGTTCGAA
TTAGATCCAGATTGCACTAAGGCCGGGCGAGCGGTACTCCGCGAGGCCAC
GGGCTTCTTTTTTGTCGAATCCCCACCAGACCGACCAGGATACTCGCGGG
TTTGGATGTTGGCGAAGGTGGATGTGAATCGGTTCGTTCCTGGAGCTATC
GTTGACTATGCGGCGTCTCGCGCTCTCCCACGGGCATCAAATTGGATCAA
GCCCACCTGTGAGGCCGCTCAACGAAGAAAATTGCGAGAGGGTATGACGG
GGAAGGGGGTGGCGACGGCGGCAGCACCATGACAGAGGCGTTAATGAAGT
ACCCCTCTGGCGTTCTGTGGTCCCGACGGAAGTGTGGAATTTTGTATTTT
CATGTTCTCGTGTGTTTCTGTGTGATTCTGTCTGTGTATTTGTCTGTGTG
TGCCTGTTCTTTTCTCTTGTTCTTCGAAAAAGTAACGGGATGTAGCGTCT
CTTTTTGGACAAAAAACGAAGTGTCGAAGTTGTTGATTTGATGACATGAT
TCTTGTCATCTTTACTCGTGTGCGTTGGTTGATTTGGGGTGTTTGTTTCG
ACCTGTGGTGGTGTATTGGGGTCGTGCAGTACGTCGTGGTGGGAGGCTGG
TCTTTCTTTTTCTTTTGCTTTACTCGAAGTATTCATGTGCTGGGCGATTG
CGAATGCATGCATTGCCCCTCGTCCATGAAGGTGGGGAAGGCGAAGAACT
GTAACGGTCTTGTGCCGGTTTTTTTTTTCGTCTTCCTTCTCTTGTGGGTG
TTCAGCGTGTGGCACGTTTGATCTCTTATCTTTGGCTCTTTATGTGATTG
AAGTTACTGTAGCGCTAATAAGTGCTTGCCCCGACGGAGTGGAAACTTGT
GGAGCAAGCGTTAGGATAAGAGGAGCCAAAGTCGTGTTGCTTCGGGTTTT
TTGTTCTCGGCGGAAGCATATGACTTTCTCTGGTTTTCTCTGACCCCGCC
AGTTGGAGAGGGGCGAAGGGCAGAGAGTGATCGACAGCAAAAAGAGGGTT
CTACATGGTTGAATGAACGAATGTTTGAATGACAGCGATTTAGCAGCCAC
CTGCTGTATGGCATCGTTTTCGGTGGATTTTGTTTTTTCTAGCCAACTTC
TATCCAGATCATTTCATGTGACCCAACTAAAAGAATCGAGAAGGTATTGT
TCGCGACGTTCGGGATTGCGAATCTTCAGGACAAAATTTGCCTGGATAGA
CCATGATGTTGCCGGTTCGTTTGTGGAGGGTGGATCGGGCAAGGACAGAT
TGTTGTCTTGTGGAGAGACCGGTTATTGTTGGTGCTTCTTTTCTTGTGTT
TTTCACGCTTTACTGTAGTACAGAACAGTGTCTGTACATCTTCTGTGTGA
TGGTAAATGGCGTTTTTTTTTTAGTGGCAACAAACATCAACGTAGTTTTC
ATGCACGATTATATTGTAGCGCGTAGTTCTCATGGGCCATCCATCTGCGG
GAGGGTAGGTGGAGAATGCCGGCATGACACCACAAAAGCGTCGAAACGTG
GACAGGTTGTATTGGTCAGTGTTGATAAAGTCAAGGGGGGGCGGGAGTGT
GTGAAAGTAGGCTTTGGCCGACTAGGGGCCTAAGTACTAAAGAACAAGTT
TTGCGTGTTTGAGATTGGTTAGTTAATTGACGTCTTTTATGAAGATGCCG
TAATATTTGTTTTGTGCCTTGTTTTGAACAGCCTAATTATTATTCTGGAA
ATACATGCAGAATTTG
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Coding sequence (CDS) from alignment at H-paniculata_contig13257:276..6391+

>mRNA_H-paniculata_contig13257.2035.1 ID=mRNA_H-paniculata_contig13257.2035.1|Name=mRNA_H-paniculata_contig13257.2035.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2820bp|location=Sequence derived from alignment at H-paniculata_contig13257:276..6391+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACTCATTGGTGTCAATGGGGAAATGTAGGGGGGAAAATACTGGGGG
AAGTCGATTTCCCTCCTCACGGCAAGTCCGCTGCGCCAGGGTCGCTACTG
GGCGGAGTGTTTTGCTTCCACGAAACTGTCATGATCCTTCTTCGGCTCCG
GCAACGGGCAGCGTCGTCGATGCAGTCGGCAGGTTCTCGAGAATGGCCTC
TACAGCGGTATTAATGTTGGTGCTCATGGGGAATAACACGTCAGCACGGA
TGAACTCATTGGTGTCAATGGGGAAATGTAGGGGGGAAAATACTGGGGGA
AGTCGATTTCCCTCCTCACGGCAAGTCCGCTGCGCCAGGGTCGCTACTGG
GCGGAGTGTTTTGCTTCCACGAAACTGTCATGATCCTTCTTCGGCTCCGG
CAACGGGCAGCGTCGTCGATGCAGTCGGCAGGTTCTCGAGAATGGCCTCT
ACAGCGGTATTAATGTTGGTGCTCATGGGGAATAACACGTCAGCACGGTC
ATCATGTTGGCGTGAAGCGTCACAACATCAGCATCAGCATCATCACAATA
ACAGAGAGACTACACCATGGACAGCGTTCGCGCCGCCTCCATTATCACCC
CACGCGCGCAGCTACGGCGGCGGTGGCATCGGATCCGCTGCGACATCGAC
AACCGCGAGAGGCTCGCGACGACCACGGATGGCCTCCCTTGGCGCCGTGC
TCGAGTCGCGCCGCGCTCGAGCACTCTCCAAGACGTCCGGCGTCTCGGTA
CCCACTGCTGTGGCCGGGGACGCGAAGAACGCGAGGGAATTGCCAGCGGC
GCACCTATTCAGCGTACAGCGAAACACGCAGGGGTCTCAGCAGCGACTAC
CGTTCCCTACGCCGGAGTTAGGGAGAGGGTCGGTCGGACGCGGGGCTGGG
GACGGCCTTCAATCTCCGAGGTTTGCTGTTCCCGGGGAGGGGCGGAGTTA
TCCCGAGAGGTTGTCGGTATCGGTGGGGAGGGCTGGGGAGGGCGCGTCGG
CGGCCGCAGTCGAGGGAAGCCGAAAGGAGGATGTGTTTGTCACTGCTGGG
GGGACAGGGCGGCCGGCGTTGCCGGAGCTGAGTGCGGAGGAGTTGACCCA
GTTGCAGGCCGGGCAACGGGTGCAGAAGCAAACTCGGGAGGGGGGCGCGG
GGAGCGGAAGCGTAGTGGTGGACGTGCGGGCGGATCCGGACGTGGTATTG
GAGTATTTGACCAAGTATAATGACTTCGCAACCATGATCGATACCGTTAG
GGAGTGCGAGGTGTTCCCCAGCGATTTCGACGCCCAACGAAAGTCATCAT
GTTGGCGTGAAGCGTCACAACATCAGCATCAGCATCATCACAATAACAGA
GAGACTACACCATGGACAGCGTTCGCGCCGCCTCCATTATCACCCCACGC
GCGCAGCTACGGCGGCGGTGGCATCGGATCCGCTGCGACATCGACAACCG
CGAGAGGCTCGCGACGACCACGGATGGCCTCCCTTGGCGCCGTGCTCGAG
TCGCGCCGCGCTCGAGCACTCTCCAAGACGTCCGGCGTCTCGGTACCCAC
TGCTGTGGCCGGGGACGCGAAGAACGCGAGGGAATTGCCAGCGGCGCACC
TATTCAGCGTACAGCGAAACACGCAGGGGTCTCAGCAGCGACTACCGTTC
CCTACGCCGGAGTTAGGGAGAGGGTCGGTCGGACGCGGGGCTGGGGACGG
CCTTCAATCTCCGAGGTTTGCTGTTCCCGGGGAGGGGCGGAGTTATCCCG
AGAGGTTGTCGGTATCGGTGGGGAGGGCTGGGGAGGGCGCGTCGGCGGCC
GCAGTCGAGGGAAGCCGAAAGGAGGATGTGTTTGTCACTGCTGGGGGGAC
AGGGCGGCCGGCGTTGCCGGAGCTGAGTGCGGAGGAGTTGACCCAGTTGC
AGGCCGGGCAACGGGTGCAGAAGCAAACTCGGGAGGGGGGCGCGGGGAGC
GGAAGCGTAGTGGTGGACGTGCGGGCGGATCCGGACGTGGTATTGGAGTA
TTTGACCAAGTATAATGACTTCGCAACCATGATCGATACCGTTAGGGAGT
GCGAGGTGTTCCCCAGCGATTTCGACGCCCAACGAAAGGTTGAGGTGACG
GTGAGCCGGTTCAGATTACGCATTCGGGTTCTGATGACCCTGGACAGGGA
GCGACAGATTGTGCAGTTCGAATTAGATCCAGATTGCACTAAGGCCGGGC
GAGCGGTACTCCGCGAGGCCACGGGCTTCTTTTTTGTCGAATCCCCACCA
GACCGACCAGGATACTCGCGGGTTTGGATGTTGGCGAAGGTGGATGTGAA
TCGGTTCGTTCCTGGAGCTATCGTTGACTATGCGGCGTCTCGCGCTCTCC
CACGGGCATCAAATTGGATCAAGCCCACCTGTGAGGCCGCTCAACGAAGA
AAATTGCGAGAGGGTATGACGGGGAAGGGGGTGGCGACGGCGGCAGCACC
ATGAGTTGAGGTGACGGTGAGCCGGTTCAGATTACGCATTCGGGTTCTGA
TGACCCTGGACAGGGAGCGACAGATTGTGCAGTTCGAATTAGATCCAGAT
TGCACTAAGGCCGGGCGAGCGGTACTCCGCGAGGCCACGGGCTTCTTTTT
TGTCGAATCCCCACCAGACCGACCAGGATACTCGCGGGTTTGGATGTTGG
CGAAGGTGGATGTGAATCGGTTCGTTCCTGGAGCTATCGTTGACTATGCG
GCGTCTCGCGCTCTCCCACGGGCATCAAATTGGATCAAGCCCACCTGTGA
GGCCGCTCAACGAAGAAAATTGCGAGAGGGTATGACGGGGAAGGGGGTGG
CGACGGCGGCAGCACCATGA
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