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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-01_008760.1 |
| Exons | 1 |
| Model size | 1588 |
| Cds size | 951 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1324.2031.1 >prot_H-paniculata_contig1324.2031.1 ID=prot_H-paniculata_contig1324.2031.1|Name=mRNA_H-paniculata_contig1324.2031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=317bp
MRTLRDHHPKIVGKTVALIQGPTAQELRNQLDLLSESFAWMFGHPRPRPC
APTSSHRQGKMSAVTTTATNTTKTSTAFGSAHTPIATSRRTATMTNRGGA
TAAAGVMTSAASDRNRCSPTITATSSCCITPIRVDGRGGPAWCPVLSTSS
KSANHAPSLKSLHNHRHPYGNTHVVCRKPIERCDTGGTSTTETNTVDTPN
TIEDGEFVSWGEVHGGSYLRSPSGGASIGGGLVLPAPGEEYCMEGNMMRM
LSISSELSEAREGDLGSDVDDDTGNDDNDNGDHGDGGSFGGFGGFGGSDG
GGGKWREGGSGRGWRR* back to topmRNA from alignment at H-paniculata_contig1324:20226..21813+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1324.2031.1 ID=mRNA_H-paniculata_contig1324.2031.1|Name=mRNA_H-paniculata_contig1324.2031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1588bp|location=Sequence derived from alignment at H-paniculata_contig1324:20226..21813+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTACGTTACCAACCGACACTTGCTCGGGGCTGGGGTTGGGGCTGGGGTTG
GTCTCGCCAGTGTTGTAGGTAGTGGTGGTGTACGGTCAAGCAGTCAGGAG
CTGAACAAGATCATTGGTAGCTGCTGCAGCAGTAGTAGCGATCCGGCGGC
GGCAACAGTAGCAGTAACGCCGCCAGGGAAGCACGCGGGGAAGGGGGGTG
CAGGGGGCGGCGGGGCGGGGCACGGTGTTGGAGATGTTATTGCGACAGGT
AGGAGTAAAGTAGACGGCAGGGGAGGTAACGGTAGCGGTAGCAGATGCGA
AAATGGGAGCGGTGATGCCTTCGCGGAAAGGGGTACGGGCACGCTGGTAG
CGGTGTCGACAGCGTCGCGCGCGCGGGAGGACAAGTCGGCGATGCGTACC
CTGCGTGATCATCACCCCAAGATTGTGGGCAAAACTGTGGCGCTCATTCA
GGGACCGACCGCGCAGGAATTGAGGAACCAGCTGGATTTGTTGTCAGAGA
GCTTCGCCTGGATGTTTGGTCACCCCCGCCCGCGCCCATGCGCGCCGACG
TCTTCACACCGTCAGGGCAAAATGTCTGCTGTTACCACCACCGCCACCAA
CACAACGAAAACGTCAACGGCCTTCGGGAGTGCACACACACCGATCGCCA
CCAGTAGGCGAACAGCCACAATGACCAATCGTGGTGGAGCCACCGCCGCC
GCTGGAGTAATGACCAGCGCTGCTAGCGATCGTAACCGTTGTTCTCCCAC
TATTACCGCCACCTCATCTTGTTGTATCACGCCCATCAGAGTTGATGGGC
GTGGTGGTCCCGCTTGGTGCCCAGTGTTGTCCACCTCCTCTAAGTCGGCA
AACCACGCTCCGTCCTTGAAGAGTCTTCACAACCATCGCCATCCCTATGG
CAACACCCATGTCGTTTGCCGGAAACCGATCGAGCGCTGCGACACTGGAG
GGACCAGCACTACGGAAACGAACACGGTGGACACGCCCAACACCATCGAG
GACGGTGAGTTCGTCTCGTGGGGAGAGGTGCATGGCGGCAGTTACCTGCG
CAGTCCCAGCGGCGGCGCCAGTATCGGCGGTGGTCTCGTGCTGCCTGCTC
CCGGCGAGGAATATTGTATGGAAGGCAACATGATGAGGATGCTCAGCATC
AGCAGCGAACTCAGTGAAGCGAGAGAAGGGGACCTAGGCAGCGATGTGGA
TGATGACACTGGTAATGATGATAATGATAATGGCGATCATGGGGATGGTG
GTAGTTTTGGTGGTTTTGGTGGTTTTGGTGGTAGTGATGGTGGTGGTGGG
AAGTGGAGGGAAGGTGGCAGTGGAAGAGGGTGGCGACGATGATAGAATTG
GAACGAGGAAAAGCAGCGCAACTTCAGCAGGAAAAGGGTGGGAGACTGAA
GTCGTAAGCGAGTGTGCTTCCACTGCTTTAGTGGCCTATTGGTGAAGACT
AAGGCGCGGGGAGGGGTACGATCGGACCGCCGCATCCAGCTCAATGAGCG
TAGTACAGCGGGACATCGGGGTTAGATTTGTCGCCGAGCCGATGGTGCGC
ACAGAATCTGGATAGCGCATATAGGCAGCATGTTAGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1324:20226..21813+ >mRNA_H-paniculata_contig1324.2031.1 ID=mRNA_H-paniculata_contig1324.2031.1|Name=mRNA_H-paniculata_contig1324.2031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1902bp|location=Sequence derived from alignment at H-paniculata_contig1324:20226..21813+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGTACCCTGCGTGATCATCACCCCAAGATTGTGGGCAAAACTGTGGC
GCTCATTCAGGGACCGACCGCGCAGGAATTGAGGAACCAGCTGGATTTGT
TGTCAGAGAGCTTCGCCTGGATGTTTGGTCACCCCCGCCCGCGCCCATGC
GCGCCGACGTCTTCACACCGTCAGGGCAAAATGTCTGCTGTTACCACCAC
CGCCACCAACACAACGAAAACGTCAACGGCCTTCGGGAGTGCACACACAC
CGATCGCCACCAGTAGGCGAACAGCCACAATGACCAATCGTGGTGGAGCC
ACCGCCGCCGCTGGAGTAATGACCAGCGCTGCTAGCGATCGTAACCGTTG
TTCTCCCACTATTACCGCCACCTCATCTTGTTGTATCACGCCCATCAGAG
TTGATGGGCGTGGTGGTCCCGCTTGGTGCCCAGTGTTGTCCACCTCCTCT
AAGTCGGCAAACCACGCTCCGTCCTTGAAGAGTCTTCACAACCATCGCCA
TCCCTATGGCAACACCCATGTCGTTTGCCGGAAACCGATCGAGCGCTGCG
ACACTGGAGGGACCAGCACTACGGAAACGAACACGGTGGACACGCCCAAC
ACCATCGAGGACGGTGAGTTCGTCTCGTGGGGAGAGGTGCATGGCGGCAG
TTACCTGCGCAGTCCCAGCGGCGGCGCCAGTATCGGCGGTGGTCTCGTGC
TGCCTGCTCCCGGCGAGGAATATTGTATGGAAGGCAACATGATGAGGATG
CTCAGCATCAGCAGCGAACTCAGTGAAGCGAGAGAAGGGGACCTAGGCAG
CGATGTGGATGATGACACTGGTAATGATGATAATGATAATGGCGATCATG
GGGATGGTGGTAGTTTTGGTGGTTTTGGTGGTTTTGGTGGTAGTGATGGT
GGTGGTGGGAAGTGGAGGGAAGGTGGCAGTGGAAGAGGGTGGCGACGATG
AATGCGTACCCTGCGTGATCATCACCCCAAGATTGTGGGCAAAACTGTGG
CGCTCATTCAGGGACCGACCGCGCAGGAATTGAGGAACCAGCTGGATTTG
TTGTCAGAGAGCTTCGCCTGGATGTTTGGTCACCCCCGCCCGCGCCCATG
CGCGCCGACGTCTTCACACCGTCAGGGCAAAATGTCTGCTGTTACCACCA
CCGCCACCAACACAACGAAAACGTCAACGGCCTTCGGGAGTGCACACACA
CCGATCGCCACCAGTAGGCGAACAGCCACAATGACCAATCGTGGTGGAGC
CACCGCCGCCGCTGGAGTAATGACCAGCGCTGCTAGCGATCGTAACCGTT
GTTCTCCCACTATTACCGCCACCTCATCTTGTTGTATCACGCCCATCAGA
GTTGATGGGCGTGGTGGTCCCGCTTGGTGCCCAGTGTTGTCCACCTCCTC
TAAGTCGGCAAACCACGCTCCGTCCTTGAAGAGTCTTCACAACCATCGCC
ATCCCTATGGCAACACCCATGTCGTTTGCCGGAAACCGATCGAGCGCTGC
GACACTGGAGGGACCAGCACTACGGAAACGAACACGGTGGACACGCCCAA
CACCATCGAGGACGGTGAGTTCGTCTCGTGGGGAGAGGTGCATGGCGGCA
GTTACCTGCGCAGTCCCAGCGGCGGCGCCAGTATCGGCGGTGGTCTCGTG
CTGCCTGCTCCCGGCGAGGAATATTGTATGGAAGGCAACATGATGAGGAT
GCTCAGCATCAGCAGCGAACTCAGTGAAGCGAGAGAAGGGGACCTAGGCA
GCGATGTGGATGATGACACTGGTAATGATGATAATGATAATGGCGATCAT
GGGGATGGTGGTAGTTTTGGTGGTTTTGGTGGTTTTGGTGGTAGTGATGG
TGGTGGTGGGAAGTGGAGGGAAGGTGGCAGTGGAAGAGGGTGGCGACGAT
GA back to top
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