Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 950 |
| Cds size | 735 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13011.1893.1 >prot_H-paniculata_contig13011.1893.1 ID=prot_H-paniculata_contig13011.1893.1|Name=mRNA_H-paniculata_contig13011.1893.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bp
MVEEDGDEAYFNEDDDDDDDAAGPMPVDTGPRQANGSAVPGGGLKLVSYG
DEDDSDDEGPLLGGGGEGGAGGGQDGNGHASSNSDGGAEGASQGREKLLP
GATRSKAAEKGTENPSDSSTTSGSTDSSRSATQANGSAAVAAAAAENAKG
HAVGGGATRRGASSSSMVDVGDEVEGARDDGRRPECRSSPPHVAAARDEA
ETGEAKAAPSNGSDSEGGDGGGGIGTSPPPTGGEPDAKRLRLST* back to topmRNA from alignment at H-paniculata_contig13011:1266..3102- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig13011.1893.1 ID=mRNA_H-paniculata_contig13011.1893.1|Name=mRNA_H-paniculata_contig13011.1893.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1837bp|location=Sequence derived from alignment at H-paniculata_contig13011:1266..3102- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGGGCAACCGAGCAGCGCAGAGCCGTCGAAAAATGGTCGAGGAGGATGG
GGATGAGGCGTACTTCAATGAAGACGATGACGACGACGATGACGCGGCGG
GACCCATGCCAGTTGACACGGGCCCTCGGCAGGCGAACGGGTCGGCCGTG
CCTGGGGGCGGTGAGATGATATACATCAAATGTATATATATATATATATA
TATATATGTGTGTGTATGCGTTGTGCTAGATATTCTCGTCAACATATCTC
CCCGTTTACAACAGTATGGCATAATGATTTTTTTACAATCCCGAGGCGTT
GATCTTGCACGGCCTGCTGCTGCTGCTGCAATGTTATTTTTTTTTCATGA
TCCAGGGGTTTCCCGCGCTGCCGCGTGGTTAGTGTTTTTTTTTCTTGATT
CATGCACCGACAAACATACCTTCGTGGATTCAGACGTGGCAAACTTAGGA
TAGCAACGAGGATCCTTTCTTTTTTTTTTCGTGTTTTTTGTTGCCCTGGA
TCCGGGATCTTGACCCTTGAACTATTTATTATCAGCAGATTGATCAATTT
TGCCGGACTCAGGGAGCATACGCGCGACTGGGTAGATGGTGATGGGGGTT
TCCCCTCCGGGCATAAAACGAAGCACTTGATGGACACAAGCTCGAGGGGG
TGGCAGAATGCGTTTAGTACAACTAGACGGAGAGATGTTTTGATCGATGT
ATTTCTTGCGTTGCCCCGCTGTATCTGCACTGCACGTGAAATCACTGCTC
ACTTGCAGGGCTGAAGCTTGTATCTTATGGGGACGAAGATGATAGTGATG
ACGAAGGTCCTCTGCTGGGCGGCGGTGGGGAGGGGGGGGCGGGGGGAGGG
CAAGACGGCAACGGACACGCCAGCAGCAACAGCGATGGCGGTGCCGAGGG
AGCATCACAAGGTAAGCTATGTATGGTGTCGACGTTAGGTTCCCGTCTTT
TTTTACGGCGTGCGGCCCTAAGCATGTATATCATGAGACAAGATTCCTGA
GGGTGAAGATGTGTGAGGAGAAGGAAATCACCGTCTAAACTATATGACTG
CGCGAAAAATGGAAGTTAGGGTGTATAGAGATACATTGAGACATCGCCTT
TTGTCGAATTAACTCGGTGAATTATGCCTCAAGATGCCTTCTTGCACGTT
TTCTGGTGCCCTTCCCTCCCTCCCCCCCTCTCCCACCCCAAAAAAAATAG
GCCGGGAGAAATTATTACCGGGCGCAACAAGATCGAAGGCAGCCGAAAAG
GGGACAGAAAACCCTTCTGATAGTAGTACAACTAGTGGCAGCACCGACAG
TAGTAGGAGTGCAACACAGGCCAATGGTAGCGCGGCGGTGGCGGCGGCAG
CGGCAGAGAACGCCAAAGGGCACGCAGTAGGTGGAGGAGCAACGAGGCGA
GGTGCAAGCAGCAGCAGCATGGTTGACGTAGGCGATGAGGTAGAAGGGGC
GCGGGATGATGGCCGAAGGCCAGAATGCCGCAGCTCGCCCCCGCACGTAG
CGGCGGCGAGAGACGAGGCGGAGACAGGCGAAGCGAAAGCAGCACCGTCT
AATGGTAGCGATAGTGAAGGGGGGGACGGCGGGGGCGGCATCGGGACGTC
CCCACCGCCGACTGGGGGGGAGCCAGATGCAAAACGGCTCCGTCTCAGCA
CGTGATGATTGAGGATTGATGCTGCTGATGATGATCCGATGGTGATGTTG
ATTATTGTTATATTCCCTCAATCCATCCATCAAATCAATCAATCCAGCAC
ACCGGTGTGAATTTTTATGACTACAGTTTGTTTGTTTTTCTGCACTTCGC
ACGTTGCTGTTGTTGGTTGTTGCCGTGGGAGGAAGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig13011:1266..3102- >mRNA_H-paniculata_contig13011.1893.1 ID=mRNA_H-paniculata_contig13011.1893.1|Name=mRNA_H-paniculata_contig13011.1893.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1470bp|location=Sequence derived from alignment at H-paniculata_contig13011:1266..3102- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCGAGGAGGATGGGGATGAGGCGTACTTCAATGAAGACGATGACGA
CGACGATGACGCGGCGGGACCCATGCCAGTTGACACGGGCCCTCGGCAGG
CGAACGGGTCGGCCGTGCCTGGGGGCGATGGTCGAGGAGGATGGGGATGA
GGCGTACTTCAATGAAGACGATGACGACGACGATGACGCGGCGGGACCCA
TGCCAGTTGACACGGGCCCTCGGCAGGCGAACGGGTCGGCCGTGCCTGGG
GGCGGGCTGAAGCTTGTATCTTATGGGGACGAAGATGATAGTGATGACGA
AGGTCCTCTGCTGGGCGGCGGTGGGGAGGGGGGGGCGGGGGGAGGGCAAG
ACGGCAACGGACACGCCAGCAGCAACAGCGATGGCGGTGCCGAGGGAGCA
TCACAAGGGCTGAAGCTTGTATCTTATGGGGACGAAGATGATAGTGATGA
CGAAGGTCCTCTGCTGGGCGGCGGTGGGGAGGGGGGGGCGGGGGGAGGGC
AAGACGGCAACGGACACGCCAGCAGCAACAGCGATGGCGGTGCCGAGGGA
GCATCACAAGGCCGGGAGAAATTATTACCGGGCGCAACAAGATCGAAGGC
AGCCGAAAAGGGGACAGAAAACCCTTCTGATAGTAGTACAACTAGTGGCA
GCACCGACAGTAGTAGGAGTGCAACACAGGCCAATGGTAGCGCGGCGGTG
GCGGCGGCAGCGGCAGAGAACGCCAAAGGGCACGCAGTAGGTGGAGGAGC
AACGAGGCGAGGTGCAAGCAGCAGCAGCATGGTTGACGTAGGCGATGAGG
TAGAAGGGGCGCGGGATGATGGCCGAAGGCCAGAATGCCGCAGCTCGCCC
CCGCACGTAGCGGCGGCGAGAGACGAGGCGGAGACAGGCGAAGCGAAAGC
AGCACCGTCTAATGGTAGCGATAGTGAAGGGGGGGACGGCGGGGGCGGCA
TCGGGACGTCCCCACCGCCGACTGGGGGGGAGCCAGATGCAAAACGGCTC
CGTCTCAGCACGTGAGCCGGGAGAAATTATTACCGGGCGCAACAAGATCG
AAGGCAGCCGAAAAGGGGACAGAAAACCCTTCTGATAGTAGTACAACTAG
TGGCAGCACCGACAGTAGTAGGAGTGCAACACAGGCCAATGGTAGCGCGG
CGGTGGCGGCGGCAGCGGCAGAGAACGCCAAAGGGCACGCAGTAGGTGGA
GGAGCAACGAGGCGAGGTGCAAGCAGCAGCAGCATGGTTGACGTAGGCGA
TGAGGTAGAAGGGGCGCGGGATGATGGCCGAAGGCCAGAATGCCGCAGCT
CGCCCCCGCACGTAGCGGCGGCGAGAGACGAGGCGGAGACAGGCGAAGCG
AAAGCAGCACCGTCTAATGGTAGCGATAGTGAAGGGGGGGACGGCGGGGG
CGGCATCGGGACGTCCCCACCGCCGACTGGGGGGGAGCCAGATGCAAAAC
GGCTCCGTCTCAGCACGTGA back to top
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