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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-04_004637.1 |
| Exons | 5 |
| Model size | 1568 |
| Cds size | 1074 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10280.189.1 >prot_H-paniculata_contig10280.189.1 ID=prot_H-paniculata_contig10280.189.1|Name=mRNA_H-paniculata_contig10280.189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=358bp
MRLATALLAISAHALALAAVLLPAATGFQDIINTCEDLHDEMRGDLVVRG
PIVCETMKNITTMSAAFTPGEVGGDIHFHNVRVVVPAGGLAAFGASTLRF
ERDEDSDTELFNVEGELHFFVDKHDPRMLHGSPNDEYNAIVTASTGDLDA
HEAEVSFSKTRIVVSLNAVDNEIPPLSFENYLAASTNSMAATAEAMNEAG
TDGYYGRPTGKIEATSSWATPITSFTAEDREALFHTTKHNRGMSKSATSI
TGSRDDVNSDKTGIMMEQNLLLANPSTTISSATDPSFATASKRFDIPKKN
RWGSKLTTHIKSLSRMPKEARERQRRFIETLISRRAARSSQDDGESEKRR
QMRKGAR* back to topmRNA from alignment at H-paniculata_contig10280:1618..6442+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10280.189.1 ID=mRNA_H-paniculata_contig10280.189.1|Name=mRNA_H-paniculata_contig10280.189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4825bp|location=Sequence derived from alignment at H-paniculata_contig10280:1618..6442+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGATATAGGAGGGGTAAGCCAGCAGCATCTGGGGGTATCCGTTTTCAGAG
ACTCTTCAAAAGCGCCCGTAGCGTGTCGCTGGTGAGCTGTTGCTGACGAA
GATTTGTCGTGCCTCCGTCATCTACTCTGATGTGACTGACCAGCCCATTC
AATGGCGGGCAAGTAGTGCAAGTCGTTGTGTTGGATATGTTTTTGAAGGA
ATTCTGGAATCTTTCTTGAAGATCGGTTCGTATTTTGGTGATGATCGACT
GCAATAGCAGGCACTAGCGGATGACGCGCTATCTCGTGCGCTTGCTTGCT
AACAGAACCCCCCCCCCCCCTCCCTCCCCCTGCTTTCCACAATTTTCCCA
CTACAAGAGCTGAGCTACTCTGCAGCACCGACTGCCGGTACAACTGATAC
CTGTGTGGTAGAGTACATAGACCGCTACCTCGACACCAACGCCTGCACAG
AAAATAGATCGAAGGTTTTCGACGGATCGTAGACCATCATGAGGCTTGCG
ACGGCGCTGCTCGCCATATCGGCACATGCGTTGGCATTAGCAGCAGTTCT
CCTGCCGGCAGCGACCGGATTTCAGGACATCATCAACACTTGCGAAGACC
TCCATGATGAAATGAGAGGTGACCTTGTCGTGCGCGGACCGATCGTATGC
GAAACTATGAAGGTGAGCGAAGAGGGGCATTGGGCGATGACGAGATGAGC
ACAACCTTTCGATGCGATCTTGTCAAGTTGCTTTGCCCACCTCGGGAGCT
TGACTGGGGTACTACTGAATGCGTAGCGCCCTACAGATGCATATATCACA
AAGAAGTCCCATTGGTTCCGAACGACCTGTTCATTAGTCTTAATGCACCG
TGATTTTTGTATACAGGCGTGCCGGTGGGTATGTCGAGCGAGGTTGTACG
GTAGGAGGTAGGTCAACAGTCACGAAAGTGGCGCCAATTTTTTGTCATCG
TGCTGCAATGAGCACAGCCAAAAAGATCGTTCTGGCAGATGATGGTGGTA
TGCAGATTTGACCACTCAACAAGCCGTGCTATGCCTGAGGTAATCGCTGC
ACACGTAGCCAGAGGGTACCTTGTTGCGGATATTGCAACATCCACGCTGT
GGTGAGGTTGGCGTCCACGCTGTGGCGAGGTTGGCAGTGTTTACATAACG
TATTAAGACGTTGTGGCGAGGTTAATAATGTACATGAAATGTCTTACACG
TTTAAGCACACACAACGTGGGGACGTTGTTATATCCGCAACAAGGTACTC
ACAACGTACCCTCTGGCCACGTGTGTGAGTGTGAGGGTCGCTCGACGGTA
CTTTGGAATCCCGCTTCTGGCTTGTATGTAATGCTCGATCACAGCTGCGC
TGTTGCGCGCTAGATTGTCAAGTTGTCATCAAGCTATTAGTTACAGCCCG
CGAAAATATCTTGCATCTTGAGACTGTGGATCTCTGTGTTCGTGAAGAGT
GTTGGACGCAATGATCGTATTATTGTGCTGCACTAAAATGCAGTCGAACC
CTTGGTTGTGGCAACAAAACATTAGGCAACCAAAGGCAAGCGCACCTTAC
ACGCCGCAGGGTGTCGGCCTTCCGTGACATACTTTGATTTGCAGTGTGTT
GTTCATCACGAACCAGTGCTGCTGCTGCTGTGTGTTGTACTGATTGTCAT
GTCGTAGCCTAAATAGTGTAGAGGCGGAGGTAAGCGCATCACCCCCCTCC
CGAAGTAAAAACTGGTTTTACCCCGCGGTTTGCTCTGAAAGCAACGAGTC
TGTGGACCGCCGAAAGAGCTCGTTGATCGACAGATAGATCTTGACCAACA
TAAATATGGGAAAAACATCAAACCTACGACGAGACGACCAAGTTGAACGC
AACAACACGAAACAAATATGGTTCGGTTAATGACAGGAGCAAGTTCAACT
AATAACAACGTACATTTTATCTTTCGTTCCTACTTGTTTGTTCCTCCTTA
CTCCCCCTACCCCTATTTACGAGAATGTTGAAATCTTGCATTGTCAATTT
CTATCAAATATGATTCCCCTATCCCCTACTCCACATTCCAGAACCCAAAG
GGATTTCGATGACGTAAATAAAGAAAAAAAAATACTCTATGAAGTTGGAA
CGAACCACGTTGAAGGCGGCAATATGAAGTAAATAGGATTTGATTATCGT
GAAAGGAGTAGCATCAGAATCCTTATTGACAGCTCAGACACCAAAGCCCA
ATAGGCAAAAATTCTTGTTGTTTTCAATTTCATCTTTTGTGTGCTCTTTT
TTCGACTCAATAATACACTTTCCAAGGGATGTCGAGATGGGGCGGCATTC
TCGATTGATTCAGTCAATTGTCATAAGGGGAAGATACGGTAGCAGCTAGA
GTTGGAAGACAAGATACCTCCCAGCGAGGTCATTAAGATCTTGTGCCTGT
TCGACCAGAATCAGCATGTATGTATTTAACGGTTTCACTTGGCTTTGTAT
CGGTGGGATGGTTCCGGGTTTGAGAAGAGAATGCCGTGGTTCACGCAGGA
AGTTTTCGCTTCTTCGCCACCGCCAATTTTTTTATTTGCTTCTCTCCATT
GCCTCAAAGCTTTGGTAGAAGAACCTATCTAAAATATCCTTTGTTACTCG
AGCTACCATCACTCCCTCAGCAGATGGGAAAAAAAAAAAGCGTTTCCCCT
CCTCAAAGAACCAAAACAACGGTACACAGACAACAATGGACTAACCTATA
TATTTTTCAGACAGCATATTGGTTCTTTGAGTTTTGAGTAAGGCATGCAC
GATATGTTCGAATGTCTAGACCAATAAATCACAGTCTGCGAGCGTCAACC
TTCAACTTATATTTCGTGGTCTAAATTTACCGGCCATCACCCTCTGCACG
CCAAACTCCAAATGTCGCACCGTGGGCGCAGAACATCACAACGATGTCTG
CGGCATTCACGCCGGGGGAGGTCGGTGGCGATATACACTTCCACAACGTA
CGCGTTGTGGTGCCGGCGGGGGGGTTGGCTGCCTTCGGTGCTTCGACCCT
TCGATTTGAGCGAGACGAGGTAACGTGAACAGTAGTTACATGTTGTCGAC
GAGATTGTCCGCGTGACACAAGACCGTAGCTAGTACACTATCTTTTTGTC
GCCAATTGAGCACCTGCGCTGTATCATTCCGTTGCCGGCTAGGATTTCAT
CTCATTCTTCACTACCGTAGCTCATGGTAGTGCGATGAAAGCGAACCTTG
TGGTAGCCAACCCTGTCACTGACACATTACCCGTGTCTCTTGGATGCCCC
CACAGGACTCAGACACGGAGCTTTTTAACGTGGAAGGAGAACTCCATTTT
TTCGTTGACAAGCACGACCCGAGGATGCTTCACGGATCACCTGTGAGTCA
TGAAGACGACTATGCGCGCAAGCACTTCTGCTTCCGGCTTTTTCACTCGA
AACCAACATTTACTCAACTGGGCACATGCAGTGAGATTCCAACTACCCCG
GGAGTCGGGGTGTGTGAAAAAAACAGTAAAATATGCTCGACACAGCCCGA
CAGTCAAATCAACTGTCGCGGCTTTAGATCCAAGTATTTGGTGCTGATCA
GAAGAACTTTAACAACTGCAGCAGTTGAATAGCGCCGCACAAGGGTTGTT
TGTTACTTATACTGACTTCTACGGTAGCACCTCTTCTCCGCTCATTCCAC
ACGCCCAACGGCTACGGTATGTCAAGGTGCATTGCTGCTTTCATATCATT
CACCATGTACCATGTGTCACACATGTCTAGTGGCACATACTGTGACCGGT
CCGTTCCGACCTTCAACTTGACGTAATTATTTCGGAATTCGCTCAGGACT
TGTTATTCATGCACCCAACCAACTGTCAACTCGAAATACTTTACGTACCG
ATCATAACGCCGGTGCAGAACGACGAATACAACGCCATCGTCACGGCGTC
CACTGGTGATCTCGACGCCCACGAAGCCGAAGTATCTTTCTCGAAAACGC
GAATCGTAGTGTCTCTGAACGCCGTCGACAACGAGATACCACCGCTTTCA
TTCGAAAACTATTTGGCGGCTTCTACAAACAGCATGGCCGCTACTGCTGA
GGCCATGAACGAGGCTGGGACCGACGGATATTATGGACGCCCCACCGGCA
AAATCGAGGCAACCTCGTCCTGGGCAACGCCCATCACCAGTTTCACCGCC
GAAGATCGTGAGGCCTTATTTCACACCACGAAACACAATAGAGGGATGTC
TAAGAGTGCGACCAGCATCACTGGGTCGCGAGACGATGTTAATTCGGACA
AGACGGGAATAATGATGGAGCAAAACTTACTCTTGGCAAACCCCAGCACT
ACTATTAGCTCTGCCACCGACCCCAGCTTCGCCACAGCCTCCAAGCGGTT
CGATATCCCAAAAAAAAACAGATGGGGGTCGAAGTTGACCACCCACATCA
AATCGCTGAGCCGCATGCCGAAGGAGGCCCGCGAAAGACAGAGACGCTTC
ATCGAAACTCTGATCTCGCGGAGGGCCGCCCGATCGTCCCAGGACGACGG
TGAATCGGAGAAGAGGAGACAGATGCGGAAGGGGGCTCGATGAACAAACA
CGATGCCAGGAAGCGTTGATTTACGATGAACGAGAAGAGCAAGTATATCG
TTTACTGGGTTGCTGAAGAAGCACAACATTTTTAGACGACAACGTGATCT
CGAGAGCTACGCAGTGGTTGATTGGTGGTGGTTAGAGGTGGGGAACGGAC
CAGAGGTTTGGAGTGAGCATAGACATTTTGTACGGGTATGTGTATTTTTA
TGAGATTTTGTGTTTGAGAGCGTGCGGTTGAGACAGGTGGGGGCGGGAGG
TGTTCGTTAAATTTGAGGACAACAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig10280:1618..6442+ >mRNA_H-paniculata_contig10280.189.1 ID=mRNA_H-paniculata_contig10280.189.1|Name=mRNA_H-paniculata_contig10280.189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2148bp|location=Sequence derived from alignment at H-paniculata_contig10280:1618..6442+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGGCTTGCGACGGCGCTGCTCGCCATATCGGCACATGCGTTGGCATT
AGCAGCAGTTCTCCTGCCGGCAGCGACCGGATTTCAGGACATCATCAACA
CTTGCGAAGACCTCCATGATGAAATGAGAGGTGACCTTGTCGTGCGCGGA
CCGATCGTATGCGAAACTATGAAGATGAGGCTTGCGACGGCGCTGCTCGC
CATATCGGCACATGCGTTGGCATTAGCAGCAGTTCTCCTGCCGGCAGCGA
CCGGATTTCAGGACATCATCAACACTTGCGAAGACCTCCATGATGAAATG
AGAGGTGACCTTGTCGTGCGCGGACCGATCGTATGCGAAACTATGAAGAA
CATCACAACGATGTCTGCGGCATTCACGCCGGGGGAGGTCGGTGGCGATA
TACACTTCCACAACGTACGCGTTGTGGTGCCGGCGGGGGGGTTGGCTGCC
TTCGGTGCTTCGACCCTTCGATTTGAGCGAGACGAGAACATCACAACGAT
GTCTGCGGCATTCACGCCGGGGGAGGTCGGTGGCGATATACACTTCCACA
ACGTACGCGTTGTGGTGCCGGCGGGGGGGTTGGCTGCCTTCGGTGCTTCG
ACCCTTCGATTTGAGCGAGACGAGGACTCAGACACGGAGCTTTTTAACGT
GGAAGGAGAACTCCATTTTTTCGTTGACAAGCACGACCCGAGGATGCTTC
ACGGATCACCTGACTCAGACACGGAGCTTTTTAACGTGGAAGGAGAACTC
CATTTTTTCGTTGACAAGCACGACCCGAGGATGCTTCACGGATCACCTAA
CGACGAATACAACGCCATCGTCACGGCGTCCACTGGTGATCTCGACGCCC
ACGAAGCCGAAGTATCTTTCTCGAAAACGCGAATCGTAGTGTCTCTGAAC
GCCGTCGACAACGAGATACCACCGCTTTCATTCGAAAACTATTTGGCGGC
TTCTACAAACAGCATGGCCGCTACTGCTGAGGCCATGAACGAGGCTGGGA
CCGACGGATATTATGGACGCCCCACCGGCAAAATCGAGGCAACCTCGTCC
TGGGCAACGCCCATCACCAGTTTCACCGCCGAAGATCGTGAGGCCTTATT
TCACACCACGAAACACAATAGAGGGATGTCTAAGAGTGCGACCAGCATCA
CTGGGTCGCGAGACGATGTTAATTCGGACAAGACGGGAATAATGATGGAG
CAAAACTTACTCTTGGCAAACCCCAGCACTACTATTAGCTCTGCCACCGA
CCCCAGCTTCGCCACAGCCTCCAAGCGGTTCGATATCCCAAAAAAAAACA
GATGGGGGTCGAAGTTGACCACCCACATCAAATCGCTGAGCCGCATGCCG
AAGGAGGCCCGCGAAAGACAGAGACGCTTCATCGAAACTCTGATCTCGCG
GAGGGCCGCCCGATCGTCCCAGGACGACGGTGAATCGGAGAAGAGGAGAC
AGATGCGGAAGGGGGCTCGATGAAACGACGAATACAACGCCATCGTCACG
GCGTCCACTGGTGATCTCGACGCCCACGAAGCCGAAGTATCTTTCTCGAA
AACGCGAATCGTAGTGTCTCTGAACGCCGTCGACAACGAGATACCACCGC
TTTCATTCGAAAACTATTTGGCGGCTTCTACAAACAGCATGGCCGCTACT
GCTGAGGCCATGAACGAGGCTGGGACCGACGGATATTATGGACGCCCCAC
CGGCAAAATCGAGGCAACCTCGTCCTGGGCAACGCCCATCACCAGTTTCA
CCGCCGAAGATCGTGAGGCCTTATTTCACACCACGAAACACAATAGAGGG
ATGTCTAAGAGTGCGACCAGCATCACTGGGTCGCGAGACGATGTTAATTC
GGACAAGACGGGAATAATGATGGAGCAAAACTTACTCTTGGCAAACCCCA
GCACTACTATTAGCTCTGCCACCGACCCCAGCTTCGCCACAGCCTCCAAG
CGGTTCGATATCCCAAAAAAAAACAGATGGGGGTCGAAGTTGACCACCCA
CATCAAATCGCTGAGCCGCATGCCGAAGGAGGCCCGCGAAAGACAGAGAC
GCTTCATCGAAACTCTGATCTCGCGGAGGGCCGCCCGATCGTCCCAGGAC
GACGGTGAATCGGAGAAGAGGAGACAGATGCGGAAGGGGGCTCGATGA back to top
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