mRNA_H-paniculata_contig12970.1863.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12970.1863.1
Unique NamemRNA_H-paniculata_contig12970.1863.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12970.1863.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 451 bits (1161), Expect = 1.620e-142
Identity = 246/422 (58.29%), Postives = 301/422 (71.33%), Query Frame = 1
Query:   22 LDEIEKIASPLRKLRPASLSNPARVPVGAVTLGKSYVTRPSLLESAISHVTNPALANVRCVLAGMGGGGKTFLASAVVQDKRVREHFRAGIFWLRVGQNAKEDLRALLRGLALELASRDNGVPPQLESLEDVTRHLAAVGAKG-SLRLVVLDDVWEEEVVDVLQQTGLQLLVTTRDRAVVSVPARSVEVGDLEENEALEVLRVGCGALRTVKLPRVEALQVAADCGKLALALEVAAPLLKGPPQDPNSWRILHDTLA----ARLRTYRARTVEARVQAVLETSFGAMADDPHRQERCVFLAVLAPGTLAPPDMLQDLWNEAPGATRTFAKELVDQSMLQAVGDAYRVHDLVLRFLKPKLKADPSRSVATSRAVEYCGQLTVLHRYTEDGATAGGLYSLIALWRSAEILSEEHQVAAAYKRSL 1272
            L+  + + +  R+LRP +L   A VP G ++L   +++RPSLL  AI ++TN A+ +  CVL GM G GK+ LASAVV+D++VREHF AG+FW+R  ++AK+ L A L G AL +AS      P L S+E+VTR+L AV A   S RLVVLDDVWE E+VD L+ TGLQLLVTTRDR+VVS+P   VEVGD+EE+EALEVLRVGCGA + ++LPR EALQ                    GPPQDP SWR LH+ L+     RL T R   V  RV AVLE S GAMADDP +Q+RC+FLAVLAPGTLAP DML+DLW+EAPGAT+TFA +LVDQSMLQ  GDA+RVHDLVL FLKPKLKADP+R +ATSR  EY GQL VL RY  DG T+ G+Y+L+ALWRS E L  E +VAA Y  +L
Sbjct:  193 LEHHQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRA-RDAKDQLHACLEGFALRVASTSGTTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVSMPGECVEVGDMEEDEALEVLRVGCGASKNLELPRAEALQ--------------------GPPQDPKSWRTLHEALSKAMSTRLGTDRIMAVPKRVDAVLEVSLGAMADDPAKQQRCLFLAVLAPGTLAPSDMLEDLWDEAPGATKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKLKADPNRPIATSRFAEYLGQLKVLRRYLGDGETSDGVYALMALWRSVEDLVGESRVAAVYMNNL 593          
BLAST of mRNA_H-paniculata_contig12970.1863.1 vs. uniprot
Match: A0A6H5KMV3_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV3_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 4.540e-108
Identity = 198/388 (51.03%), Postives = 243/388 (62.63%), Query Frame = 1
Query:   22 LDEIEKIASPLRKLRPASLSNPARVPVGAVTLGKSYVTRPSLLESAISHVTNPALANVRCVLAGMGGGGKTFLASAVVQDKRVREHFRAGIFWLRVGQNAKEDLRALLRGLALELASRDNGVPPQLESLEDVTRHLAAVGAKG-SLRLVVLDDVWEEEVVDVLQQTGLQLLVTTRDRAVVSVPARSVEVGDLEENEALEVLRVGCGALRTVKLPRVEALQVAADCGKLALALEVAAPLLKGPPQDPNSWRILHDTLAARLRTYRARTVEARVQAVLETSFGAMADDPHRQERCVFLAVLAPGTLAPPDMLQDLWNEAPGATRTFAKELVDQSMLQAVGDAYRVHDLVLRFLKPKLKADPSRSVATSRAVEYCGQLTVLHRYTEDGATA 1182
            L+  + + +  R+LRP +L   A VP G ++L   +++RPSLL  AI ++TN A+ +  CVL GM G GK+ LASAVVQ ++VREHF AG++W+R  ++AK+ L A L GLAL +AS      P L S+E+VTR+L AV A   S RL+VLDDVWE EVVD L+ TGLQLLVTTRDR+VVS+P   VEVGD+E+ EALE+LRVGCGA + ++LPR E LQV  DCG                                     R  TV  RV AVLE S GAMA+DP +Q RC+FLA                   APGA +TFA++LVDQSMLQ  GDA RVHDLVL FLKPKLKAD SR + TSR  EY G L VL RY EDG  A
Sbjct:  174 LEHQQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVQVEKVREHFHAGMYWVRA-RDAKDQLHACLEGLALRVASTSGTTAPGLGSVEEVTRYLKAVCADSVSPRLIVLDDVWEREVVDTLKLTGLQLLVTTRDRSVVSMPGECVEVGDMED-EALELLRVGCGASKNLELPRAEVLQVVVDCGN-----------------------------------DRIMTVPKRVDAVLEVSLGAMAEDPAKQRRCLFLA-------------------APGAAKTFARQLVDQSMLQPAGDALRVHDLVLLFLKPKLKADSSRPITTSRIAEYLGHLKVLRRYVEDGRRA 505          
BLAST of mRNA_H-paniculata_contig12970.1863.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 5.150e-80
Identity = 184/413 (44.55%), Postives = 246/413 (59.56%), Query Frame = 1
Query:   88 ARVPVGAVTLGKSYVTRPSLLESAISHVTNPALANVRCVLAGMGGGGKTFLASAVVQDKRVREHFRAGIFWLRVGQNAKEDLRALLRGLALELASRD----NGVPPQLESLEDVTRHLAAVGAKG-SLRLVVLDDVWEEEVVDVLQQTGLQLLVTTRDRAVVSVPARSVEVGDLEENEALEVLRVGCGALRTVKLP----RVEALQVAADCGKLALALEVAAPL--LKGPPQDPNSWRILHDTLAARLRTYRARTVEAR-VQAVLETSFGAMADDPHRQERCVFLAVLAPGTLAPPDMLQDLWN-EAPGATRTFAKELVDQSMLQAVGDA-YRVHDLVLRFLKPKLKADPSR-SVATSRAVEYCGQLTVLHRY--TEDGATAGGLYSLIALWRSAEILSEEHQV-AAAYKRSL 1272
            A VP GA+TL +SYV R ++ E A   +  P        + GMGGGGKT L SAVV+   VREHFR G+FW+RVG++AK  L +LL+GLA E+++      +GVP  LESLE V +HLA V + G S RLVVLDDVWE EVVD L   GL++LVTTRDR+VV V    +E+GD+ E EALE+L       RTV  P    R +  +V   CG L L L +A  +  +KG      +W  L        +  R R  ++  ++ VL TSF A+A    +QE  + + VLA G LAP +ML++LW  E    TR  A+ LV + +LQAVG + YRVHDLVL F+K  ++A+      AT+   +Y G++ VL  Y   E GA   GL+ L ALWRS E LS + ++  A+Y+ SL
Sbjct:    2 AAVPAGALTLPQSYVERAAVQEVA-DGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELL---LKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRGEQSSSIKVVLGTSFDALAA--RKQEESLKMTVLAAGALAPIEMLRNLWEIEDAEGTREEAEGLVSKCLLQAVGGSGYRVHDLVLEFVKTSIRAEEEMVEKATALQAQYLGRVDVLKSYGDPEHGAGNQGLFFLDALWRSVEKLSGDPELEVASYRASL 408          
BLAST of mRNA_H-paniculata_contig12970.1863.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 1.960e-76
Identity = 191/436 (43.81%), Postives = 256/436 (58.72%), Query Frame = 1
Query:   22 LDEIEKIASPLRKLRPASLSNPARVPVGAVTL-GKSYVTRPSLLESAISHVTNPALANVRCVLAGMGGGGKTFLASAVVQDKRVREHFRAGIFWLRVGQNAKEDLRALLRGLALELASRD----NGVPPQLESLEDVTRHLAAVGAKG-SLRLVVLDDVWEEEVVDVLQQTGLQLLVTTRDRAVVSVPARSVEVGDLEENEALEVLRVGCGALRTVKLP----RVEALQVAADCGKLALALEVAAPL--LKGPPQDPNSWRILHDTLAARLRTYRARTVEAR-VQAVLETSFGAMADDPHRQERCVFLAVLAPGTLAPPDMLQDLWN-EAPGATRTFAKELVDQSMLQAVGDA-YRVHDLVLRFLKPKLKADPSR-SVATSRAVEYCGQLTVLHRY--TEDGATAGGLYSLIALWRSAEILSEEHQV-AAAYKRSL 1272
            L+  +   + L  L P SL + A VP GA+ L   SYV R ++ E A   +T P  +     + GMGGGGK+ LASA V+   VREHFR GIFW+RVG+ AK  L ALL+GLA ++ +      +GVP  L+ LE V +HLAAV + G S RLVVLDDVWE EVVD     G ++L+TTRDR+VV +PA  +E+GD+ E EALE+LR   G   TV  P    R +  +V A CG L L L +A  +  ++G      +W  L   L    +  RAR  ++  ++ VLETSF ++A    +QE  + +AVLA G LAP +ML++LW  E    TR  A+ LV + +L AVG   YRVHDLVL F K  ++A+      AT+   +Y G+L VL  Y   E GA   GL+ L ALWRS E LS + ++  A+Y  SL
Sbjct:  238 LEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVA-DGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSG---TVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAV--RKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSL 667          
BLAST of mRNA_H-paniculata_contig12970.1863.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 2.930e-76
Identity = 191/433 (44.11%), Postives = 256/433 (59.12%), Query Frame = 1
Query:   22 LDEIEKIASPLRKLRPASLSNPARVPVGAVTL-GKSYVTRPSLLESAISHVTNPALANVRCVLAGMGGGGKTFLASAVVQDKRVREHFRAGIFWLRVGQNAKEDLRALLRGLALELASRDN----GVPPQLESLEDVTRHLAAVGAKG-SLRLVVLDDVWEEEVVDVLQQTGLQLLVTTRDRAVVSVPARSVEVGDLEENEALEVLRVGCGAL-RTVKLPRVEALQVAADCGKLALALEVAAPL--LKGPPQDPNSWRILHDTLAARLRTYRARTVEAR-VQAVLETSFGAMADDPHRQERCVFLAVLAPGTLAPPDMLQDLWN-EAPGATRTFAKELVDQSMLQAVGDA-YRVHDLVLRFLKPKLKADPSR-SVATSRAVEYCGQLTVLHRY--TEDGATAGGLYSLIALWRSAEILSEEHQV-AAAYKRSL 1272
            L+  +   + L  L P SL + A VP GA+ L   SYV R ++ E A   +T P  +     + GMGGGGK+ LASAVV+   VREHFR GIFW+RVG+ AK  L ALL+GLA ++ +       GVP  L+SLE V +HLAAV + G S RLVVLDDVWE EVVD     G ++L+TTRDR+VV VPA  +E+GD+ E EALE+LR   GA+ +     R +  +V A CG L L L +A  +  ++G      +W  L   L    +  RAR  ++  ++ VLETSF ++A    +QE  + +AVLA G LAP +ML++LW  E    TR  A+ LV + +L AVG   YRVHDLVL F K  ++A+      AT+   +Y G+L VL  Y   E G    GL+ L ALWRS E LS +  +  A+Y+ SL
Sbjct:  221 LEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVA-DGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAV--RKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASL 650          
BLAST of mRNA_H-paniculata_contig12970.1863.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 2.540e-75
Identity = 190/438 (43.38%), Postives = 250/438 (57.08%), Query Frame = 1
Query:    7 DARAVLDEIEKIASPLRKLRPASLSNPARVPVGAVTLGKSYVTRPSLLESAISHVTNPALANVRCVLAGMGGGGKTFLASAVVQDKRVREHFRAGIFWLRVGQNAKEDLRALLRGLALELASRD----NGVPPQLESLEDVTRHLAAVGAKG-SLRLVVLDDVWEEEVVDVLQQTGLQLLVTTRDRAVVSVPARSVEVGDLEENEALEVLRVGCGAL-RTVKLPRVEALQVAADCGKLALALEVAA--PLLKGPPQDPNSWRILHDTLAARLRTYRARTVEAR-VQAVLETSFGAMADDPHRQERCVFLAVLAPGTLAPPDMLQDLWN-EAPGATRTFAKELVDQSMLQAVGDA-YRVHDLVLRFLKPKLKADP--SRSVATSRAVEYCGQLTVLHRYT--EDGATAGGLYSLIALWRSAEILSEEHQVAA-AYKRSL 1272
            D R VLD I    +    L P SL + A+VP  AV L  S     + +      +TNP        + GMGGGGK+ LASAVV+   VREHFR GIFWL VG+ AK+ L  LL+GL  ++ +      +GVP  L+SLE V RHL AV + G S RLVVLDDVWE EVVD L   G ++LVTTRDR+VV VP R +E+GD+ E EALE+L    G + R     R    +V   CG+L L L +A   P++KG      +W  L D L   +    A   ++  +  VLETSF A+     +++     AVLAPG +A  +ML +LW  E  G TR  A+ LV + +LQ VG   YRVHDLVL F+K K+KAD   ++ +A  +A ++ G+L VL  Y   E GA   GL+ L ALWRS E LS + ++   +Y  SL
Sbjct:  111 DVRRVLDAISAKGATGTVL-PPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKGLTAGAWGKLIDELENVVTKMEASLEDSNSLNVVLETSFDALTF--RKKQAFKKTAVLAPGAVASTEMLLNLWETEDTGGTREDAEGLVSKCLLQDVGGGGYRVHDLVLDFVKIKIKADMEMAKKIAALQA-QFLGRLNVLKSYEHPEHGAGNQGLFVLDALWRSVEQLSGDPKLEVPSYSTSL 544          
BLAST of mRNA_H-paniculata_contig12970.1863.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 1.270e-74
Identity = 187/436 (42.89%), Postives = 256/436 (58.72%), Query Frame = 1
Query:   22 LDEIEKIASPLRKLRPASLSNPARVPVGAVTLGKSYVTRPSLLESAISHVTNPALANVRCVLAGMGGGGKTFLASAVVQDKRVREHFRAGIFWLRVGQNAKEDLRALLRGLALELA----SRDNGVPPQLESLEDVTRHLAAVGAKG--SLRLVVLDDVWEEEVVDVLQQTGLQLLVTTRDRAVVSVPARSVEVGDLEENEALEVLRVGCGALRTVKLP----RVEALQVAADCGKLALALEVAAPL--LKGPPQDPNSWRILHDTLAARLRTYRARTVEAR-VQAVLETSFGAMADDPHRQERCVFLAVLAPGTLAPPDMLQDLWN-EAPGATRTFAKELVDQSMLQAVGDA-YRVHDLVLRFLKPKLKADPSR-SVATSRAVEYCGQLTVLHRYT--EDGATAGGLYSLIALWRSAEILSEEHQV-AAAYKRSL 1272
            L++ +   + L  LRP  L + A VP GA+ L + YV R ++ E A   +T P        + G+GGGGK+ LASAVV+   VREHFR GI W+RVG+ AK  L  LL+GLA E+        + VP  L+SLE V +HLAAV A    S RLVVLDDVWE EVVD L   G ++L+TTRD +VV VPAR +++GD+ E EALE+LR   G   TV  P    R++  +V A CG L L L +A  +  +KG      +W  L  +     +  RAR  ++  ++ VLETSF ++A    +QE  + ++VLA G LAP +ML++LW  E    TR  A+ LV++ +L AVGD  YRVHD+VL F K  ++AD      AT+   ++ G+L VL  Y   E GA   GL+ L +LWRS E LS + ++    Y+ SL
Sbjct:  196 LEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERAAVQEVA-DGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSG---TVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQ--KQEEFLRMSVLAAGALAPIEMLRNLWEIEDAEGTRDEAEGLVNKCLLHAVGDGGYRVHDMVLEFAKTSIRADEETVEKATALQAQFLGRLDVLKSYRDPEHGAGDRGLFFLDSLWRSVEKLSGDPELEVTTYRASL 625          
BLAST of mRNA_H-paniculata_contig12970.1863.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 1.260e-73
Identity = 181/417 (43.41%), Postives = 247/417 (59.23%), Query Frame = 1
Query:   67 PASLSNPARVPVGAVTLG-KSYVTRPSLLESAISHVTNPALANVRCVLAGMGGGGKTFLASAVVQDKRVREHFRAGIFWLRVGQNAKEDLRALLRGLALELASRD----NGVPPQLESLEDVTRHLAAVGA-KGSLRLVVLDDVWEEEVVDVLQQTGLQLLVTTRDRAVVSVPARSVEVGDLEENEALEVLRVGCGALRTVKLPRVEALQVAADCGKLALALEVAAPL--LKGPPQDPNSWRILHDTLAARLRTYRARTVEAR-VQAVLETSFGAMADDPHRQERCVFLAVLAPGTLAPPDMLQDLWN-EAPGATRTFAKELVDQSMLQAVGDA-YRVHDLVLRFLKPKLKADPSR-SVATSRAVEYCGQLTVLHRY--TEDGATAGGLYSLIALWRSAEILSEEHQV-AAAYKRSL 1272
            P SL + A VPVGA+ L   SYV R ++ E A   +TNP        + G+GGGGK+ LASAVV+   VREHFR GI W+RVG+ AK  L  LL+GLA E+ +      +GVP  L+SLE V +HLAAV + + S RLVVLDDVWE EVVD     G +LL+TTRDR++V  PA  +E+GD+ E EALE+LR   G +      R++  +V A CG L L L +A  +  +KG      +W  L        +  RAR  ++  ++ VLET+F ++A    +Q+  + +AVLA G LAP +ML +LW  E    T   A+ LV + +L AVG   YR+HDLVL F K  ++A+      AT+   +Y G+L V+  Y   E GA   G++ L ALWRS E LS + Q+  A+Y+ SL
Sbjct:   38 PPSLPDMAEVPVGALELPHSSYVERAAVQEVA-DGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTVDPGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKVVLETTFDSLAT--RKQKEFLMMAVLAAGALAPIEMLSNLWEIEDAEGTHAEAEGLVSKYLLHAVGGGGYRMHDLVLDFAKTSIRAEEETVKRATALQAQYLGRLDVVESYGDPEHGAGDQGIFFLDALWRSVEKLSGDPQLEVASYRASL 451          
BLAST of mRNA_H-paniculata_contig12970.1863.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 1.410e-72
Identity = 191/457 (41.79%), Postives = 255/457 (55.80%), Query Frame = 1
Query:   22 LDEIEKIASPLRKLRPASLSNPARVPVGAVTLG-KSYVTRPSLLESAISHVTNPALANVRCVLAGMGGGGKTFLASAVVQDKRVREHFRAGIFWLRVGQNAKEDLRALLRGLALEL-ASRDNG---VPPQLESLEDVTRHLAAVGAKGSL-RLVVLDDVWEEEVVDVLQQTGLQLLVTTRDRAVVSVPARSVEVGDLEENEALEVLRVGCGAL-RTVKLPRVEALQVAADCGKLALALEVAAPL--LKGPPQDPNSWRILHDTLAARLRTYRARTVEAR-VQAVLETSFGAMADDPHRQERCVFLAVLAPG-----------------------------TLAPPDMLQDLWN-EAPGATRTFAKELVDQSMLQAVGDA-YRVHDLVLRFLKPKLKADPS--RSVATSRAVEYCGQLTVLHRYT--EDGATAGGLYSLIALWRSAEILSEEHQVAAA 1257
            L+  +   + L  L P SL + A VP GA+ L   SYV R ++ E A   +T+P        + GMGGGGK+ LASAVV+   VREHFR GIFW+RVG+ AK  L ALL+GLA E+ A+R +    VP  L+ LE V +HLAAV + G+  RLVVLDDVWE EVVD     G ++L+TTRDR+VV VPA  +EVGD+ E EALE+LR   GA+ +     R +  +V A CG L L L +A  +  +KG      +W+ L + L    +  RAR  ++  + AVLETSF ++A    +QE  + LAVLA                                LAP +ML++LW  E    TR  A+ LV + +L AVG   YRVHDLVL + K +++AD    R V   +A  + G+L VL  Y   E GA    L+ L ALWRS E LS + ++  A
Sbjct:  184 LEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQEVA-DGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAV--RKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQA-HFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEVA 636          
BLAST of mRNA_H-paniculata_contig12970.1863.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 1.900e-70
Identity = 174/424 (41.04%), Postives = 248/424 (58.49%), Query Frame = 1
Query:   52 LRKLRPASLSNPARVPVGAVTLGKSYVTRPSLLESAISHVTNPALANVRCVLAGMGGGGKTFLASAVVQDKRVREHFRAGIFWLRVGQNAKEDLRALLRGLALELASRD----NGVPPQLESLEDVTRHLAAVGAKGSL-RLVVLDDVWEEEVVDVLQQTGLQLLVTTRDRAVVSVPARSVEVGDLEENEALEVLRVGCGALRTVKLP----RVEALQVAADCGKLALALEVAA--PLLKGPPQDPNSWRILHDTLAARLRTYRARTVEAR-VQAVLETSFGAMADDPHRQERCVFLAVLAPGTLAPPDMLQDLWN-EAPGATRTFAKELVDQSMLQAV-GDAYRVHDLVLRFLKPKLKADPSR-SVATSRAVEYCGQLTVLHRYTED--GATAGGLYSLIALWRSAEILSEEHQVAAAYKRSL 1272
            +R + P +L   A VP GA+ L +SYV RP + E A+  + +P  A    ++ GMGGGGKT LASA+V+   V EHFR GIFW+ +G+ A + L   L+GLA E+ +      +GVP   +SLE V +HLAAV ++GS  RLVVLDDVWE EVV      GL++LVTTRDR++V VP   +E+GD+ E+EALE+L    G   TV  P    R +  +V   CG+L L L +A   P++KG      +W  L +              E+R +  VL  SF A+A    ++E  + +AVLAPG +AP +ML++LW  +    T+  A+ LV++ +LQ V G  YRVHDL+L++L+ K+K D  R   AT+   +Y G+L V+  Y +   GA   GL+ L  LWR  E LS +  +  A  R++
Sbjct:  226 IRDVLPPTLPQRAAVPTGALALPRSYVERPGVQE-AMGDLMDPEKALAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSG---TVGQPGDGVRTQMTKVVDRCGRLPLVLAIAGSMPVVKGKGLKDGAWEELIEEFENVTTIMWEPGEESRNLDMVLGASFNALAA--RKREEFLRMAVLAPGAVAPFEMLRNLWEIQDVEGTKEEAEGLVNKCLLQDVDGVGYRVHDLLLKYLRVKIKQDGERVKKATALQAQYLGRLDVVMSYGDQKHGADNQGLFGLGTLWRCLEKLSGDPVLETASYRAI 643          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12970.1863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W2_ECTSI1.620e-14258.29NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KMV3_9PHAE4.540e-10851.03NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5LJA6_9PHAE5.150e-8044.55NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI1.960e-7643.81NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G720_ECTSI2.930e-7644.11NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KU94_9PHAE2.540e-7543.38NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LGG5_ECTSI1.270e-7442.89NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FUD7_ECTSI1.260e-7343.41NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KXS7_9PHAE1.410e-7241.79NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LPV9_ECTSI1.900e-7041.04NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12970contigH-paniculata_contig12970:736..2910 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score455.3
Seed ortholog evalue3.1e-125
Seed eggNOG ortholog2880.D7G6W2
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759,KOG4658@1,KOG4658@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons3
Model size1272
Cds size1272
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12970.1863.1prot_H-paniculata_contig12970.1863.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12970 736..2910 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929023.3183303-CDS-H-paniculata_contig12970:735..10411622929023.3183303-CDS-H-paniculata_contig12970:735..1041Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12970 736..1041 -
1691480703.2302232-CDS-H-paniculata_contig12970:735..10411691480703.2302232-CDS-H-paniculata_contig12970:735..1041Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12970 736..1041 -
1622929023.3292034-CDS-H-paniculata_contig12970:1721..20091622929023.3292034-CDS-H-paniculata_contig12970:1721..2009Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12970 1722..2009 -
1691480703.2407687-CDS-H-paniculata_contig12970:1721..20091691480703.2407687-CDS-H-paniculata_contig12970:1721..2009Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12970 1722..2009 -
1622929023.339319-CDS-H-paniculata_contig12970:2232..29101622929023.339319-CDS-H-paniculata_contig12970:2232..2910Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12970 2233..2910 -
1691480703.2502995-CDS-H-paniculata_contig12970:2232..29101691480703.2502995-CDS-H-paniculata_contig12970:2232..2910Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12970 2233..2910 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12970.1863.1

>prot_H-paniculata_contig12970.1863.1 ID=prot_H-paniculata_contig12970.1863.1|Name=mRNA_H-paniculata_contig12970.1863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=424bp
MEDARAVLDEIEKIASPLRKLRPASLSNPARVPVGAVTLGKSYVTRPSLL
ESAISHVTNPALANVRCVLAGMGGGGKTFLASAVVQDKRVREHFRAGIFW
LRVGQNAKEDLRALLRGLALELASRDNGVPPQLESLEDVTRHLAAVGAKG
SLRLVVLDDVWEEEVVDVLQQTGLQLLVTTRDRAVVSVPARSVEVGDLEE
NEALEVLRVGCGALRTVKLPRVEALQVAADCGKLALALEVAAPLLKGPPQ
DPNSWRILHDTLAARLRTYRARTVEARVQAVLETSFGAMADDPHRQERCV
FLAVLAPGTLAPPDMLQDLWNEAPGATRTFAKELVDQSMLQAVGDAYRVH
DLVLRFLKPKLKADPSRSVATSRAVEYCGQLTVLHRYTEDGATAGGLYSL
IALWRSAEILSEEHQVAAAYKRSL
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mRNA from alignment at H-paniculata_contig12970:736..2910-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12970.1863.1 ID=mRNA_H-paniculata_contig12970.1863.1|Name=mRNA_H-paniculata_contig12970.1863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2175bp|location=Sequence derived from alignment at H-paniculata_contig12970:736..2910- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGATGCCCGTGCGGTGCTTGACGAGATTGAAAAGATAGCTTCCCC CCTACGCAAACTTAGGCCAGCAAGTCTGTCGAACCCGGCCCGCGTACCTG TAGGCGCGGTCACCCTAGGTAAATCATACGTGACGCGACCTTCGTTACTG GAGAGTGCCATCAGTCACGTCACGAATCCGGCCCTGGCCAATGTTCGCTG TGTGCTTGCCGGCATGGGCGGAGGGGGCAAGACATTCCTGGCGTCCGCGG TTGTACAGGATAAGAGGGTTCGGGAGCACTTTCGTGCGGGAATATTTTGG CTGAGGGTGGGACAAAACGCTAAGGAAGATCTTCGTGCTTTATTGCGAGG GTTGGCCTTGGAGTTGGCGTCAAGGGACAACGGCGTTCCTCCCCAGCTCG AAAGCTTGGAAGACGTGACGCGTCACCTAGCTGCAGTTGGTGCGAAAGGC TCACTGCGCTTGGTCGTGTTGGATGACGTGTGGGAGGAGGAAGTCGTGGA TGTTCTACAACAGACGGGGTTGCAGCTGCTGGTAACCACGCGCGACCGTG CCGTGGTATCTGTGCCAGCAAGGTCCGTTGAGGTAGGGGATTTGGAGGAG AACGAGGCGCTGGAGGTTCTGAGGGTCGGTTGTGGAGCGTTGCGAACAGT TAAACTTCCGCGAGTGGAAGCGTTGCAGGTGACAAGTCTGGTCTTGTGTG TTGATTTCTGGTAGCGGGCAGATCCTAATGCCTGTAATAACATACCTCGA AGCACATATTTGGGAAGACAGCTTGGTGCCTCGGACAGCGTTCGTGTATC CACCCTCCGTATTCGGCTGTTGGCGGTAAGTTTGCGATTGTTTTCAGGAT CCAGGTTACCGTTGATCACACTTGATTCAAACGTCCACCTCGTTGTTTCA GGTCGCCGCTGACTGTGGGAAGCTTGCTCTCGCGCTTGAAGTCGCCGCGC CGCTGTTAAAGGGCCCTCCACAAGATCCGAACTCTTGGCGCATTTTACAT GATACTCTGGCAGCGCGATTGAGGACGTACCGTGCCAGGACTGTAGAAGC ACGCGTGCAAGCTGTCCTTGAGACAAGCTTCGGTGCCATGGCAGATGACC CCCACAGGCAGGAGAGATGCGTGTTCCTTGCGGTACTTGCTCCGGGTACG CTTGCACCACCCGACATGTTACAGGATTTGTGGAACGAGGTGCGGTGGTG AGATAGGGGAAGAGTAGGAGGAGTAGCCTGGCATAGTGCAGTAGTTGGTG TCATGCCCAGAGTATGTTTCTCGACGCCAGCAGGCGGAGGTATGCCGCGT TTCACTTGTGTTAGTCTACGAAACGTGTCGGGAATATTCTTCTTGATGTC CAACATGGCCCGTCCTTACTCGCTATGGTCTACGCAAGCTCGCGGAATCC AGGTTAAGGTTCACGCCACGGGTGTTCTCAGAAGCTCAAATCCGGCAACT CGCAGTGTCTGGCTACGGTGAACAGATCCGCAGATGACGCAAAGTCACGA TCAGGAGAGTTGGGAGAGAGTTGATTTTTGTTTCATGCCCATAAGTAGTT GCTCCGAAGTGCCCTCCATGCCAACACACTGCACATCCAGGAATAGGACC AGGATGTGACCAGCCGACCGCACCTATCTCCAAGGGCTCCTAGAGCTCAC ATGTATGTACGGGCGTGTTGGCTGACTTCACATGGTGAATGTTTGCAGAT CGGTGGACGCTTGTGCGCAGAGCAGAAGTGGTCATGAACAAGACGCCGTT GATGGGGCACGTTGACCTATGATTCGTCTACTGGTGGCGCGATTGAAGTT TGTGATATTTTCGCTGTGAGGTTTCATTCTTCTTGTTCTTCCGTGTGCTC AATTATGCGTCCTCAACAGGCCCCTGGGGCTACGCGCACATTCGCTAAAG AGCTTGTGGATCAGTCCATGCTCCAAGCTGTAGGAGATGCTTACCGCGTT CACGACCTTGTCTTGCGTTTCCTGAAGCCCAAACTCAAGGCCGATCCCAG TCGGTCCGTAGCAACCTCGCGCGCTGTGGAATACTGCGGCCAGTTAACGG TTCTACATAGATATACCGAGGATGGGGCGACAGCTGGCGGTTTGTACTCT CTGATCGCCCTTTGGAGGTCGGCGGAGATCCTCTCGGAGGAGCACCAAGT TGCAGCTGCCTACAAGAGGAGCCTG
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Coding sequence (CDS) from alignment at H-paniculata_contig12970:736..2910-

>mRNA_H-paniculata_contig12970.1863.1 ID=mRNA_H-paniculata_contig12970.1863.1|Name=mRNA_H-paniculata_contig12970.1863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2544bp|location=Sequence derived from alignment at H-paniculata_contig12970:736..2910- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGATGCCCGTGCGGTGCTTGACGAGATTGAAAAGATAGCTTCCCC
CCTACGCAAACTTAGGCCAGCAAGTCTGTCGAACCCGGCCCGCGTACCTG
TAGGCGCGGTCACCCTAGGTAAATCATACGTGACGCGACCTTCGTTACTG
GAGAGTGCCATCAGTCACGTCACGAATCCGGCCCTGGCCAATGTTCGCTG
TGTGCTTGCCGGCATGGGCGGAGGGGGCAAGACATTCCTGGCGTCCGCGG
TTGTACAGGATAAGAGGGTTCGGGAGCACTTTCGTGCGGGAATATTTTGG
CTGAGGGTGGGACAAAACGCTAAGGAAGATCTTCGTGCTTTATTGCGAGG
GTTGGCCTTGGAGTTGGCGTCAAGGGACAACGGCGTTCCTCCCCAGCTCG
AAAGCTTGGAAGACGTGACGCGTCACCTAGCTGCAGTTGGTGCGAAAGGC
TCACTGCGCTTGGTCGTGTTGGATGACGTGTGGGAGGAGGAAGTCGTGGA
TGTTCTACAACAGACGGGGTTGCAGCTGCTGGTAACCACGCGCGACCGTG
CCGTGGTATCTGTGCCAGCAAGGTCCGTTGAGGTAGGGGATTTGGAGGAG
AACGAGGCGCTGGAGGTTCTGAGGGTCGGTTGTGGAGCGTTGCGAACAGT
TAAACTTCCGCGAGTGGAAGCGTTGCAGATGGAAGATGCCCGTGCGGTGC
TTGACGAGATTGAAAAGATAGCTTCCCCCCTACGCAAACTTAGGCCAGCA
AGTCTGTCGAACCCGGCCCGCGTACCTGTAGGCGCGGTCACCCTAGGTAA
ATCATACGTGACGCGACCTTCGTTACTGGAGAGTGCCATCAGTCACGTCA
CGAATCCGGCCCTGGCCAATGTTCGCTGTGTGCTTGCCGGCATGGGCGGA
GGGGGCAAGACATTCCTGGCGTCCGCGGTTGTACAGGATAAGAGGGTTCG
GGAGCACTTTCGTGCGGGAATATTTTGGCTGAGGGTGGGACAAAACGCTA
AGGAAGATCTTCGTGCTTTATTGCGAGGGTTGGCCTTGGAGTTGGCGTCA
AGGGACAACGGCGTTCCTCCCCAGCTCGAAAGCTTGGAAGACGTGACGCG
TCACCTAGCTGCAGTTGGTGCGAAAGGCTCACTGCGCTTGGTCGTGTTGG
ATGACGTGTGGGAGGAGGAAGTCGTGGATGTTCTACAACAGACGGGGTTG
CAGCTGCTGGTAACCACGCGCGACCGTGCCGTGGTATCTGTGCCAGCAAG
GTCCGTTGAGGTAGGGGATTTGGAGGAGAACGAGGCGCTGGAGGTTCTGA
GGGTCGGTTGTGGAGCGTTGCGAACAGTTAAACTTCCGCGAGTGGAAGCG
TTGCAGGTCGCCGCTGACTGTGGGAAGCTTGCTCTCGCGCTTGAAGTCGC
CGCGCCGCTGTTAAAGGGCCCTCCACAAGATCCGAACTCTTGGCGCATTT
TACATGATACTCTGGCAGCGCGATTGAGGACGTACCGTGCCAGGACTGTA
GAAGCACGCGTGCAAGCTGTCCTTGAGACAAGCTTCGGTGCCATGGCAGA
TGACCCCCACAGGCAGGAGAGATGCGTGTTCCTTGCGGTACTTGCTCCGG
GTACGCTTGCACCACCCGACATGTTACAGGATTTGTGGAACGAGGTCGCC
GCTGACTGTGGGAAGCTTGCTCTCGCGCTTGAAGTCGCCGCGCCGCTGTT
AAAGGGCCCTCCACAAGATCCGAACTCTTGGCGCATTTTACATGATACTC
TGGCAGCGCGATTGAGGACGTACCGTGCCAGGACTGTAGAAGCACGCGTG
CAAGCTGTCCTTGAGACAAGCTTCGGTGCCATGGCAGATGACCCCCACAG
GCAGGAGAGATGCGTGTTCCTTGCGGTACTTGCTCCGGGTACGCTTGCAC
CACCCGACATGTTACAGGATTTGTGGAACGAGGCCCCTGGGGCTACGCGC
ACATTCGCTAAAGAGCTTGTGGATCAGTCCATGCTCCAAGCTGTAGGAGA
TGCTTACCGCGTTCACGACCTTGTCTTGCGTTTCCTGAAGCCCAAACTCA
AGGCCGATCCCAGTCGGTCCGTAGCAACCTCGCGCGCTGTGGAATACTGC
GGCCAGTTAACGGTTCTACATAGATATACCGAGGATGGGGCGACAGCTGG
CGGTTTGTACTCTCTGATCGCCCTTTGGAGGTCGGCGGAGATCCTCTCGG
AGGAGCACCAAGTTGCAGCTGCCTACAAGAGGAGCCTGGCCCCTGGGGCT
ACGCGCACATTCGCTAAAGAGCTTGTGGATCAGTCCATGCTCCAAGCTGT
AGGAGATGCTTACCGCGTTCACGACCTTGTCTTGCGTTTCCTGAAGCCCA
AACTCAAGGCCGATCCCAGTCGGTCCGTAGCAACCTCGCGCGCTGTGGAA
TACTGCGGCCAGTTAACGGTTCTACATAGATATACCGAGGATGGGGCGAC
AGCTGGCGGTTTGTACTCTCTGATCGCCCTTTGGAGGTCGGCGGAGATCC
TCTCGGAGGAGCACCAAGTTGCAGCTGCCTACAAGAGGAGCCTG
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