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Homology
BLAST of mRNA_H-paniculata_contig1292.1833.1 vs. uniprot
Match: D7G7I8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I8_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 6.550e-13 Identity = 59/176 (33.52%), Postives = 83/176 (47.16%), Query Frame = 3
Query: 375 MLAWAEQVDARIAKGELSPIGSGRQTGDRGG-----ADSGGVDGVLGSNQEQIELSRVSELLIKRRQQNDPLSQADASALRAALNAVTGFVQDAGDGSTSTENSSVSGNFSEISISTKGNRSDNSGEAGGGGTSAPQGRKNTINHVDNPIYGSREVRDTVYLYAWSLLKRQQEEAD 887
ML WAE+ D RIA G+L P+GS R G A+ G L S+QEQ +++ +SELL SALRAA+ ++ V+ +++ T + G+ G A + + N IYGSREVRD VYLYAWSL+K +Q+ A+
Sbjct: 1 MLVWAEETDRRIATGQLPPLGSRRPPSGDGAVTVTAAEQQGAGASLLSDQEQAQMATLSELLSXXXXXXXXXXXXXESALRAAIAGLSASVE-----------KDTDAKALDVAADTSSGPDTSDGDVTAAGHVAE-----AEDIIPNHIYGSREVRDQVYLYAWSLMKNRQDAAE 160
BLAST of mRNA_H-paniculata_contig1292.1833.1 vs. uniprot
Match: A0A6H5JMF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF6_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 1.010e-9 Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = 3
Query: 336 NLFQVTPVPTYEEMLAWAEQVDARIAKGELSPIGSGRQ-TGDRG----GADSGGVDGVLGSNQEQIELSRVSELLIKRRQQNDPLSQADASALRAALNAVTGFVQ 635
N +VTPVPTYEEML WAE+ D RIA G+L P+GS R +GD A+ G L S+ EQ +++ +SELL SALRAA+ ++ V+
Sbjct: 33 NAIRVTPVPTYEEMLVWAEETDRRIATGQLPPLGSRRPPSGDAAVTVTAAEQQGAGACLLSDHEQAQMATLSELLSXXXXXXXXXXXXXESALRAAMAGLSASVE 137
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-02_000450.1 |
| Exons | 6 |
| Model size | 1433 |
| Cds size | 789 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1292.1833.1 >prot_H-paniculata_contig1292.1833.1 ID=prot_H-paniculata_contig1292.1833.1|Name=mRNA_H-paniculata_contig1292.1833.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp
MPYSAGSSLSVSNAFIFASPSLLGSSVRDFPPLPGPWRSSCCITASTNQH
RRGFFRIQGADTGDEQEDNPNLFQVTPVPTYEEMLAWAEQVDARIAKGEL
SPIGSGRQTGDRGGADSGGVDGVLGSNQEQIELSRVSELLIKRRQQNDPL
SQADASALRAALNAVTGFVQDAGDGSTSTENSSVSGNFSEISISTKGNRS
DNSGEAGGGGTSAPQGRKNTINHVDNPIYGSREVRDTVYLYAWSLLKRQQ
EEADLVQEEDSR* back to topmRNA from alignment at H-paniculata_contig1292:14027..27222+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1292.1833.1 ID=mRNA_H-paniculata_contig1292.1833.1|Name=mRNA_H-paniculata_contig1292.1833.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13196bp|location=Sequence derived from alignment at H-paniculata_contig1292:14027..27222+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGACTTTATCAGGAATGGATTATGACTATACAAACGTGTAGGAGAAATCG
TTTCACGATCGTGTGTGCTGCGGTGATATCTGAGATCCCATCAGCCTTCT
ACAATTAAACTGGTTATATACGACCATGCCGTACAGCGCTGGTTCTTCTC
TTTCCGTTTCGAATGCCTTCATCTTCGCATCTCCTTCATTGCTAGGTTCC
TCCGTTCGAGATTTTCCGCCTCTCCCAGGGCCGTGGAGAAGCAGTTGTTG
CATCACGGCTTCAACTAACCAGCATCGTCGAGGGTTCTTTCGCATACAGG
TTTGTGTACCTCCGCTGTGCAGTCCAGATGGGGTGATTGAGACATTATTA
CACCGCATCAATTGAGACTTTGGTAAGTCATTTAAGTTGTAGTCAATGCC
TGCGATGTACACTGTCGTCCATGGTAGAGTCGCAACTTGTTGTAGTTGTC
GTACGGACAGAATAGTCACAGCATGAGCGGTCCCATGTGCGCAGTCCTAC
GTTTTAGGTTGATGTTGGCATGGTCAATGACTTGCATGATCTCTAGCTGG
TGCGCGAATGTCACTAAACGTGACACGGTGTCCTGTACTACATTTATGTT
TACAGATTAATTATCCTTAAGAAAAGTGCGATAATGCGGGGGGTCGCGAA
TACTGTCATACAAACATAACCTCTGTCGTCTTTCGTGAAGTTTAGAGCTG
CACTACAGACTGTATACTTGGAACCACTGAGCTACGTACATGAATTGCAC
CCTGTACTGTACTGTATCCCCAAACGAAAACTTGTGCAGCATTGTGGAAA
GGAGTCAAACCTGTCAGTGTGCTGATTTATCATTATTAATAGAATTCGTA
TTATTGGGGGGCTCTATCAGAGAAATATTGTTAAATTTTCCAAATTATGA
GGCAAAAATTCATGTTTCAGTAGTAAGTACCGTACTATCGCCACTACTAA
AGTAGCAGCTAATTTCTTGGTGTTGAAACCGACTGCCAGAATAAGTACAT
TGTAGTCAATTGATCGTAACTGGCATTATAACTGGAAAACTGTCCGGAAA
AGCTTCCAGTTTACCAGTTATTTTCTCGGGCACATGTGTCATACCCTAAA
CCGTTCCCCATATATGCCATTCTCCAGCGTTTGCGGGGACAGCATGACAC
CCAGAACGGATTATGCAGTCTTCATATCCGACAGCATCAGCGCGTCAGAT
TTCCGGTGTCTTTGCAGCTTACAGACACTTCTAGTGCCATATATTGAGAG
TGGTCAAGGTTTTGTATTGATGTAGCATTAGATTGGAAAGGTGCAAAAAT
GCATGAGCAAGTCTATGGATCTGCAGAGAAGCTAGTGTAACCTGTTGCAT
GCGTTTTCGTTCGAATTGCAGGCATGTAATACTGGGTGATCGCTGGAAGA
TTATGACCACCAAGATACTTGCCGAGACCTCAAAGATGTTGTGGAACATC
GAAAAACTGTATCCTTACTATGCGTATTCTGGCGCATTGCTGGGTTATTG
TGCCCCTCGCGGAGCTCTGTTGCGCACTGCTTCATATTTTATATAACGAG
CAGTCCATTACTGGTCATCTTATTTCTTGTTTCGCAGTTTTTAAATTGAT
GACGCTCTCGATTAAGCCCATTTTCAGAAGGGGGCAGAATTCGAGACGAT
TTGATTGAATGCGAGCCCAAATTGGGTATTTTCCTACCTCCAGCGCCATC
TCCAACGGGCCTCCCTCATGAGCCGAGGGTGGGGCGTATGCATGCCTCTA
CCGGTGCTGCCTAGTATGGCAGCGCGGCCGAGGTGCGGGCGGTTTCGCCG
TGTGGCGGTGAGGCCGCGAATGCTCCAGATTAAAGCGACAACTGTAAATG
GTTCACATATTTTCCTCCCAGTTAACTGATCGAATCAACAAGTGTTTGAA
CACTATGATTCTGTGTTGAAACATATATAAATGGAAGTCGAAGAAAGAGC
GAGTGGGAAAAACATCAGATGGGCTTTAGCCCTCTGTGCTTGGTCAGCGT
GCATACGACTACCGATGGTCATATGTGCACTGGCCGAACGCGGAGGCTGA
AGTTCGTCGCTTTCAACAAGCTCATTGGTTTCACTTCGGTAATCTACGTA
TTGTACTCTACGGCACTCTAATCTACTCTACTCCAGTCGTCTCTATGACG
GATGCTCCAGTAATATTATTTTGCAAGTTAAAAGAGAAGCTGCGAACGCG
GATCAAGGAGGAGATGATAATATTTTTGGCGAATTCTTCCTAAATCCAAA
TACAGTACGGTGGCGTAGTGTATCTTGGTATATCTTTTAGGAGCCATGGC
AACGCCATGGCGAAGACGGCCTGGGTCCGAGTGTACTTGCTTCACGCGTG
CTCTGCATTGGCGTAGGCGACTGGACTCAAAAAGCGCTCACCATGCCTAC
CGCACCGCACCATTCGGTACGTACCGCTCTGATGTCCTACACTGGTGTAT
TTATGACGTACTGGTTGGTGATTTTTGGGAGATCATTGCTATGCTCGGTG
GTACTGCTAGTCTTGTACCACCCACCATGCACAGAAGGCATAGTCAATTT
CCATTATTATATCTAAATATTATCTCCATGTGTCCGCACGTGTGGGCTTT
CATTGTTTGCACGGCTTTCACACCACCACCGTCACGAGCGTGATATCCTT
GGTTATACGGACTGTCTAATCTTCGCTTGTTGAGAGCAAATTATTCACCA
CTACACTAAGCTCTTTTATCACCTTGGCCGTCCTGTTTGCACATGCTGGC
ATCTACTGTATGATACATACGATATAGCTTACAGTATATGGTTTACAGTT
GGCTGATGATTAAGGTCTGCTCTGCTCTTCTAGCTCCGAAGTGAATCTGC
CCGGGATTCCTTCCGTATCGACGCCTTGATCGTCGTGATTTACAGGGCGC
TGATACGGGCGACGAGCAAGAAGACAACCCCAACCTCTTTCAGGTGAGCT
TGTACCATGTCGTTGTCCGCATGCTCCTGGTACACGAAGGTTTTCCTTCC
TACACTCAAGGAAAAGGTGACATAGATGGTGGTGGAGGGAGAAGTGGTCG
TGCAGCAGGGCGGCGCGAACCCGCACACGGGCAAGAGCACGCCGAGGAAG
CTAAACCTGGCAGGGAGGGAGGGCGGATGGAACATCAAGCTCGAAGCGCA
GCCGGCGTAGTCTCCCGATCTCAACATTAACGATTTGGGGGTTTTCGCAT
CTCTGAAATTTAGAGTGTGGAGGGAGCGCTACAGCACCATAGACGACCTT
TCAAAGGGGGTTAAGGCAATGTACGACGAGTATGACACGGATACTTTAGA
ACGGGTCTGGTTGAGCCTCTTCAAGACGCACGATCAAATGTTGGAATTGT
GGGCGATAACGAATTCAATGTTGAGCACACCGAGGACGAGGAAAAGGCAG
CGTGATGGGCTTTAAGACCAGTCGGTCCCGAATGACAGAGACGCTTATGA
TGCGGCCTTGAATTGGTGGATTGAGGGGGAAGAAGGCAGTAATGAAAATT
CAAATTAGTGTATAAAACGTCAAGGGATACGACGCAATACATCATTTCTT
AACCGGAGGTCTCTTGGGATTTTCAGTCGATTTCATATTTCAGATGATTT
CCGGGTTTTCGCAAAATCTGTCATTTTCGAAAAGAAAACGTGCTGAGATG
CTCGGTTCTCGACCATTTCGTCTTGAAATTAAAAGATTTTAAGATGTCTA
TATGCAAGCTGAACGTGTAGGCTTTCGGATGATATGGTCCATTTTTCACG
GAACCCAAACTTGCAAAAGATATTCCCAAAATACCGTCAAAGCCCAGACT
TCTTTATGGGACAGAGGAAGTATCCCAATTATGGTTGCTGATTTTGCCTG
TCTTCACACTTTCAAGGCTAAAGCACATAAAAGCACTACAGTAGCATTCG
GTTTTCTCTTGTATCTGGCGCGAAGAAGGGCTTGCTGAACACGCGGTGTC
TGTGTCATACATTCACCTCTTATTTTATACTGAATATATACATTCCTTCG
CCAGAACCACCACCGATCCACCGACTCTCTTCGAATACAACCCGTGGTGA
TAACAAATTAAGTATAATTTTGTTATCATTATCAATGGTACTGGTGCATA
ATATAGTATCACCCCCACGCTCCCCTCCGTATACCGTTTCCCATCATAAA
CGTCCAAATTGTTGTCCAGGGGGGTGTTAAACAACACTGTCAACTTCGTT
GCTACTGTCAACCATGGTACCCAGGTAACTCCGGTGCCCACCTACGAGGA
GATGTTGGCATGGGCGGAACAAGTGGACGCACGAATCGCGAAGGGAGAAT
TGTCACCGATTGGTTCTGGGCGACAGACGGGGGACCGTGGAGGGGCCGAC
AGTGGTGGGGTAGACGGGGTGCTGGGCAGCAACCAGGAGCAGATAGAGGT
GACGTTACAGGCCCACCGCGTCTAGTGTAGTCACTTTGTTTTCTTCATTG
GGGTGGCAGTTAGGAACGGATGCAGGTTTCGACATGGGACGACTGATCTC
GCGTACTGTAGCGTGTTGCTTTAGCGCTTCGGGCATCAGCCAGGAGCGGG
TGCAGGTGACATCACGGCTGTTGCTGTTCCTCGTTCATCGAGAAAAAAAT
AGAGACTGCTTCGCTACACCTGTTGTACTCATATCTTAACTCGCAGTATA
GCTGTACTCTTTTACATTCACGGTAAGGGTATTCGTTTTAGCATCGGTGA
GGTGGAACAACGTTTGAAGCTAACGCCTTTGTGCTGGCTTTCGTCCTGGC
TTGATTTTTTTCTAATATATACATGTTATATATATATATACACAAATTTA
TGTTTTATGCATTTGTTTTTGTTCAAGACGCTTTTCACACAATTTCGTGA
TTGGCTAGCTCGGTAAAGTGGTAAGTACTGATGCCGATGGCATGTAGGCA
GTTTCGTTACGACATCAAATTCGCGGCGTGACGCGTTAGCTGTTGGGCGT
TCCCAGTTTTTGCTGTCTACAATATACTCGATTTGTTCTTCTTCCCTACC
CACTTGTTGCTTAGTGACTGTATAACTGCACAGCTCGGTTCATGCCATGC
TGGCCTTTGTCTTGATTCGATCTCTGGTGCGTGTTTCGTGAGAAACAATT
GCTATACATATTGCCAAATTTTACAAAAATAGGAACAACCGAAGAGACAC
ATGAAATTCGTTGCTGCTGATAATATTTTGCAATGGTGCATTTGTCGATA
CGAGTCGGTTTGGGAAATAGCATAAAATACGATTAAAACATACTGAGCAT
TAGTGTAGTTTTGGTGTACACGTGGCAAATTCACTACGTTTTCCTGTCTG
CACTCGAGTAATGATCGCATCTAAATTTTGGCGCACGCTGTGTCCACATA
TTGCGGGAAGTGCAGCAAAGCTGTTGTATCTGGGCTCAGGTTAAGTATGG
ACTGAACCACCGCAGCCTGGCTCAACTAATAGCTAGGGCTGGGTAAATTA
TGAGCTTTTTCTGATAACTTTCTTTTGCTGGTTCGCAGTTCACGGTGCAC
CCCGATCCGAGCAGAGCCAACACCGAACTCTAGCCGTAAACCCAATCCCT
GGGGCATACCGCAGTGTGCCTTGAAAATCGGCGCAGCTTTTCGTCGTGCA
CCAGAACGTTCCTGGCGAGAACATGTTGAGAATGTTTCGGGTGTTGCGTT
TTTTCGGATTGAAAGTATTGTTTATTCATTCCAAGTCGATTGATGAACCG
TTGCTATCGACAAACAAACGTAACTCAATAGAATTCTACGATATATGATG
GCTGGAGGTTTTCGGGGCAATTCATTTTTGTTCTTTGGTTTTCGAAAAGG
GACATAAAGAGGTGTATGTGTATCGCGCGCTATATGTCCGAAGTATCCTT
CATGCATCCATAGTACCACAGTGGGCCCTCTCAGTAAGAGAGCGACATTT
GCGTAGGTATAATAACGTTTTTTTAGGCATGAAGTTAAGATATAAATGTT
ATACTTTATTGCAAAGGTTGGAACCTGTCGCAAGGCACTTCGTTTGTTGC
TTTTCCTCATCAACCCCCCGCAGTTTTAGTGAATTTGTCGTAAATGAAAT
ATTTTTGTCAAAATATATATATAAGTTCGCACACAGTACGCACTCGTAGT
GCAGTAGATCGAGATATGCAACGTACCTTGATCATTTTCGACGATTTCAA
GAAGCTTCATGAGGGTATGATATTTTCTTCATCTTTATTGGGGGGAAGAG
CGACTGAAAATCCAAATTTAGCCAATCTTCAAAAAAGCTCTCGATTTTCT
TTCCGGGCTTTCGCGAGGAGTTTTTTTGTCAAACCCCTGGGCCATCGCTA
AGGAACCTTCGCCCGCTGCTATCCATTTTCAACCGTGGATGTTATTATTT
ACTTCGGTTATTTGATCCTACAGAGACAGAATAACCGTGCGCCCCAATTA
ACCATGGGTGCTTATTTTACTGTTTTGATTGTTCCAATGCTTCAAAAATG
GCACGTCCTCCCCATGGTAAAACCGCGCTGTGTGTGTGCTGTTTCGTTAC
CTATCTTGCAGCTGTCCAGGGTATCCGAGCTGTTGATTAAGAGAAGACAG
CAGAACGACCCTTTGTCACAGGCCGATGCCTCCGCATTGAGGTGTGTGTT
TTATGTGACTGCTGGTGCCTAGCATGATGAAGGAAGGGTGGTAGGTAGGG
CTGCATATGGATCGTTCGGATAATTTATTCTTTTAGTTAGTAGGCGAAGT
CAAATCGACATTCAAGCACGTTACCAATATACCTACTTCGTAGATATGTA
GCGAATGTATTCGTGCCAGACAAACGCCCTCCCCCCCCCCCCTCCGCTAG
TGAAGGGGCCTCGCCGGAGGCACGACTTCTAAGGCAGAAAAAAACCGCGC
TTCGGGTTGATCTCATTTCAAGATCGAAGTGAGCATTCCATAGGACAACC
ACTACTAGATGCATATAATATTTGGATCATATCTACAGCATGGGAGGCAA
AGTATCGATACGATGGTGGGTCGCCAATCGTTTTTTACTCTACTGTACAC
TCTACAATATATTGTGAAAAACATGCGGGGCGGGGGCGCCCATACATGGG
CTCAAAGTGATATGTCTTTAGGGCCGACGATGAAACGCCGAATATATTAC
CATTGCCGATGACAGAAAGATACTCTAATAATATTTTGTCAACAGTACTT
GGGAGTTGTGACTCGCTAAATCTGACGGAAACCAGCCCCATATCGGCTGG
AGGTCGATTAGAATCGATCCTGAACTGGTCATACCAGAAAATATCTAGGG
CTGAATACTGGCACAGTGTGTTTTCCCGTATTAGTGATACTGACCGTATA
CTTCTACTGGCTCCGACGGTTGCCAGTATTGCCAAAAAGTTGAACATTCA
CGTACGTCATGGTAAAATTCATCAATACTCACGAGAAACCCCAGACTGGT
CATTACCCATTGAGCGTAGCGCGCGCGCCGGCAAGGTCTGCAGCACTGCA
GGGGATGCAGAGAGGTAGGTAGGGGTACGGATAGCATATAAGCAACGAAT
AATGCAACATGTATATATATATAGATATATACTTCAGGTCAATCGGGAGT
CAATATTTTCGCTATCACGCCGTTATGGTTCAGCACTCGATTTAAAAAAG
AGACGAAGTCAGAATCCTGAATGATTCTGCCTACGGCGGCACCTCCAGCA
CGCCCCCCTTACCAGCCGGGGGCGGGGGCGTTCGGCTCGTGCTAAAGCGC
TACCATCTCGCCAACCGCTTTACTGGCCTAAGCGGCCAGTATTTAGCCCT
AGTCAAATTTAACACAACGGACCGCCGATCGGCATAAATCAGACAGAGCC
GACCGCGAATCGATGCTTCAAACGATAATCGAGTAGAACCGGCCTCGAGG
CGTCATAAAAATGAAAAATTCAACGAAACCACTTCCACCGCGAACCAGTT
CTACTTCTGGTCGCACGTGAAAGTTGTCGATTATGCCGGTCATATGAAAA
ACCTCGAAGTTTCTTGATCAATTTCACCGGGGAGAAAATTGATTAGAAAA
CGATCGATTAATCCGTAATCGTAGATCCGACAACAATTGTCGCGGTCACA
GGATTTTGTGACACGCTAGCGCTATCGCAGATATCTGACTCGCCCACAAA
TAATTACAAGGTTTGACATTTTTATTTTTTTTATTTTTTTTTAACCCCCG
GAAGGTTTGACATCATATTGTATTCGGCCCGATTCCGACGTGCTCCTGTG
TATGTATGTGTTGACTGTTCGAGTTCACGACATAAAAAATGCATGACTCT
TGTTCTTAAAATCTACGTTGTGCGTCTTCAGTGTTAGCTGTGACTCTCAA
TCACGCAGCAGGAATTCAAGGGTTGCTGAAGCCGCTGACCACCGGTGCAG
CGATTGGACCATGCGTTCAAGCGATATTCAGAATCCATGCACTGGAATAT
CCGGCCCCCTTACACCCCCTCTCAGCTCAGATGTTTGCACTTTTTATGAG
GTTTGTTACCGCCAAACTGCACCATCTTGGTTGCATGCACCTGATGTACG
TCGCCAATGCAGCTCGTGGATTGACAAGTCTGAAGAAATTTCTTGAAAAA
CATAGAAGATTTTTCGGATTGTGATATATATCTATATATCTATATATATG
TTTATATATAAATATACCGTACATTTAGTTGTCCCGCCATCCTCCTACGA
ATGCAACAATGGTCTGCAGCAAGCTTGGGTATTTTTGCCTTGCCGGTTTA
TTGCTGTTGCTCCAGTGACCATGGGAAGGTTCCGAGATAGTCCGTCGGGA
CGTTTTTTCAGCCTCTTTTTCAAGGGATCGAAATAGATCCCATTAAGACA
ACCCGGCTTGGTTATGGGGAAGTGATATGGTGTGATTAGTCGACCCCCCT
TCTCTGTTGGGGTAGTTTCGGTCGTGTTGATGTCCGGTTAAAGTCCAAAA
CAACCATTGCGGTAACAGTAAATGTATGGAAAAACGAGAAAATAGCCGAA
GCTTTTGCAAGTGTTTAGGGCCCTGGAACTGTCCACTGTTCCGAAATGTT
GAAACTGTCGTTTTCGCTCGGAAACAAAGCAGCAATGATCATTACACCGT
GAGAGACCATCTATAGCAGTGTATGAATTCCCCTCGCCAAGGATACTGGA
ATAAGTTCACCCCACGGTGCGTAGACGACAAGAGCCCGCTGCTTATGCAA
TTTTGACCACAGGATGATGAACCTTACGTTCTCCCCCCTCTAATTAGCGG
TCGCTGAATCGATATCGAGGGTGAGGAACACGTTTTAGTTCAGCAGTTTT
ATTCGTCAAGTGGATTGCGCCGCATTTTGGGGTGCCCAGTTCACTTGCGT
TAAGCATGAAACACGACTTGTTCATGATATCTGTTCGAAAACTATCACGA
AAACAAGGACATAGCACGTAGCGTTTAAAAACCCGATACAAAATCACACG
CAAACAGAAAGCATAACGTCATCCGAATTTCGGCGGACGATATTTTGTTA
TACACCCTCCCCCCGGCTTAACCCTCCCTACGAACCCTTTTCCGTTTATA
TTCTGCTATGTTTGTGACTCTACTTGGTTGTCATTCTCGTAGAGCTTTTG
CCGCCCTGTCATGTTTCGGAGAAAAAACACGTTAAATGTACTTGATGAGT
AGATTTTTCTTGGGCGGGTTTATTGCGAATATGGTTGTGAACTGATCGGA
CGAGCAGTTAAGCCTTGTGGAATTGGACATTATAAGCTGACGATTTGAAA
CCAAGGTGTGGTTGCGATTTTTCAGCTTTCGTCCTCACATTTCACCTAGT
AGGTGATCCTCAGACCTGAAGCGCTGGGAAAACACCCGGTAGTAATTCAG
GGCAGCCTTAATTTGTATGTAATTGATTTTCCACTTCTGAAAGCTGAGCT
TCAATAGCGTTGGCGTCATTGTTATATGTTTGCGAGCCCGGAGAGGCAGA
CCTTGCTGAGGTATGTGACCCACGCGTGTGTCTAATACCTACAGACTGCT
TCGTTTGCAGCTCACTGTTGTTTTATACCGTCGTATGTGACGAGTAAGCG
CTACGCAGCACCTACCGCACAATACCTCATGTGGCTGGGGAACTGAAAAT
ATAGCTTCTAATGTACGGACTGACGATTCGGATGCATTTGATTTTAGTGT
TTGGAGTGTCGTATTGGGTGGAAACATTGCATTGAACACCTTCGTCCTTA
GAGAGGCTCATGATTGGTCGAGTGACCGTTTTCACGCTGGCCCGCTGGTA
GCTCCCATTGTACACGGTTTCGCACCATGGTTGTTGTCGGTGGTTGTTTC
ATCAGTTTTTTCTTCATCTTTTCGGAAAAGTAATCAAGCATTTGCACAGG
GGACGGAAGGGGAAAATTCCGAAGGGTTCAATCGGTAAAGTGGGGGCAGC
AAAGTCGCAATGGCCTCCCCTGGCCGGTGAAGAATATCCGCCGGACGGAG
AAAAATGATACGTTTTGACTTCACAACGCCTCCGTGTCATGTGAAAATAG
CGACCTCCGGGATTTGTGTTTCTAAGAATGTGTTCCGAGCAAAGCTGCAG
ATATTTTTTACTATGAAATCCATCGTTTGGACACAATAGGGTGAAAAGAA
TGCGGGAATGGTCTTACAGCTGTTCTTGTTTCCGCCGCACCGCACCGTAT
CGCCTGTGACTTGCGCACCAACGGGAGAAATTGTTCGCAATGTGACCTAA
TAATTTGTTTTGTTTCTTCTGGCAGCATGTGCTACTACTACCTAGTGCTG
CGGTAAGGAACAGCAAATGTCGATCAAACCCGACCAGACGCAAAGTATTT
AGTAGAGATGATCGCCGCCAAGATGACTAGCAAACAAGGAACAGCAACTG
CTAGGAGGGTGGCGCGGGTTCTGCAGCATTCACAGCGGCCTTCAAGACCG
TCGTCGAGATTGCTCATAAAACCGTAGACCTCCTCAGAAACGCTGTCATG
AATGTCGCTACTGGATACTGGATACTGGATACTGGACACTCTTTGGGGCG
TGCTGGAGTCTCCAGGGAGCTTGAAACGGAAAATAGTGGAAAATGACTGG
ATAGCTTGGTATCTTATCCGTCAGTTGTTCAGTTATAATAGTTAGCGAAA
CTAGTCAGTACGACTGACGCCAGGTCACAAGTGCAATCGCTACATTTGAC
GTGGTGTGGGAAAACATGATGTCGCTATCAAGAATCATGAACAGAGCGTG
TGAGAACGATATTATCATGTTTGCGAGGCGCACTGATTGGTATGCAAGAA
ACATCACATTGTCCTAAAATATTTGATTATTCGCTTGATTGCAGCAGACG
CAAGCTATAAGAACCACTAGATGTCCGTTTTTTGCGCGAAAGATGTTGAC
ACAAGCGGTGCAGCGAAGCAGCACCGATTACATCGCAGCATAAACGCCAT
CGATAGTAAATAGCCTCGAGACGTTCACTCGTCCGCCGACTGGAAAATAA
ACGTTCACAGCCTGCATCCGTTCAATGTTGGGAGGGAAACATGTCATTAC
CAATGCGCGTCGTGAATTTCCTCTCATTTCTTGGAATTTATTTTGGCGTC
TTTTGCCTCCGCAAAAATACAGAGCTGCCCTGAATGCCGTCACTGGATTC
GTCCAGGATGCTGGCGACGGTTCCACATCGACTGAAAATTCTAGTGTCTC
TGGAAATTTCTCAGAAATATCCATCTCGACGAAAGGAAACAGAAGCGACA
ATTCGGGCGAAGCGGGGGGAGGCGGAACATCAGCGCCACAAGGAAGGAAG
AACACCATCAACCATGTTGATAATCCTATCTATGGTTCTAGGGAGGCAAG
CATGCGAATTTATTGGAAAATGAACGATTTGTGCCCCTTGTGTTTGTAGT
AGCCGTTACGTTGCAAGAGCCTCTTCTCCTCTGCATGCTTTCGTGATACC
CCCTTTGCCGGCGTTGCTCATGGGGGGCACTGTAGAATGCTTCCCCCCAT
AGAGTGGTTTCGCGTACTGGTATGCGATTCTGCAGGTTGCATGGTTGGTG
TTTTCTGCCCTCCTATGTATTCGCAAGTTCACATCATAAGTAGTCTTCGC
GAACCTAGGAAGCATCCCCTTCGAGCGAAAACAATATACGAGTATCCAAA
AACCAGGAGTGCCGTTGTAGGCCTTACACGTTACTGCGAGACCACTTTAT
CCCAAGGCGACTTTGCGTTATGCAATAGTTGGTTCTCAGAGTCAGAGCTT
TTGTGTTTTTGTCATGGTTGGCTTATCGACTCTTTTTGCTGCCCCGCGTT
TGCGTTCCGAGTAAACCTGTCACACCTGCACCCCCCATCGCCACCCCTAC
ACCACTGACACTAACCCTTCGCGTTTCAAAATTGGGTGTTGTTGTAGCGT
CTGAAATCGGCCAAATACTGCGCCGCTTCGCGACCGGGCAACCACCGAAA
CGGAATATCTTGGAGCCAGGTTTCAGGGCTCTGCGGAGGTTCGCGCAGTA
CATCGTTACACTAAAACCAAGTACAGAACTACGAAAAACCGACGTGATCG
ATACATGAAGTAGTATTAGCTTGGGATTTTGGGAGTGCCGCGAGATCTGT
GTTTTAGTCATACACCTCATGTTCGTCCTGGATGCTCCCCTCAGTTCCCC
TGACAAACAATGCCTCCAACCATGTTCGTTAAATCAGGTGCGGGACACTG
TGTATCTCTACGCGTGGTCGTTACTGAAGCGCCAACAAGAAGAAGCCGAC
CTTGTGCAAGAGGAGGATAGTCGATAGTGCCGTATTTAGCATGCGGTCCA
TAGTACATGCTACCAGTGTTTTGCTTTAGACGTGCGAGAATGTTTGCTGG
GAACTCGTACCCAATCCATTTGTCTCTAGGATGGGATTTCGTGATCTTTT
CTATTCTAAGCTCTAAGCTCCTAGCGTGTTGGTCTGATCGCTGAAGCTCT
CTCTCTAATATGTGCCGGTTTGTGTTGGAGTTTGAAGCTAAAACGGAGCA
TTTGCTGCTCTCGCTTTCGCCACGTGATGGTAGCAACAGGTAGAAAATGT
GGAACGTCGAAGTTGCGCTCTGATTAGTGCTGCGGTAGGGGGGGGGCGTA
CTCCTGTTTTGCACGTCGCAGTTGTTAAACCGTTGATGACGTATCCTTGG
GACAACGGAGCTCTGTTCCTTTCCGAGTGATTTCCGATGGCCAATTGCTC
CACCGTGCGTTACCAAATGTGGCTACGGTAGGGAGGGTAAAATGTTCAAC
GAGCGCCGATCCGCACACCGGCTAAAAAATAACCTCAAATCACAAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1292:14027..27222+ >mRNA_H-paniculata_contig1292.1833.1 ID=mRNA_H-paniculata_contig1292.1833.1|Name=mRNA_H-paniculata_contig1292.1833.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at H-paniculata_contig1292:14027..27222+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGTACAGCGCTGGTTCTTCTCTTTCCGTTTCGAATGCCTTCATCTT
CGCATCTCCTTCATTGCTAGGTTCCTCCGTTCGAGATTTTCCGCCTCTCC
CAGGGCCGTGGAGAAGCAGTTGTTGCATCACGGCTTCAACTAACCAGCAT
CGTCGAGGGTTCTTTCGCATACAGATGCCGTACAGCGCTGGTTCTTCTCT
TTCCGTTTCGAATGCCTTCATCTTCGCATCTCCTTCATTGCTAGGTTCCT
CCGTTCGAGATTTTCCGCCTCTCCCAGGGCCGTGGAGAAGCAGTTGTTGC
ATCACGGCTTCAACTAACCAGCATCGTCGAGGGTTCTTTCGCATACAGGG
CGCTGATACGGGCGACGAGCAAGAAGACAACCCCAACCTCTTTCAGGGCG
CTGATACGGGCGACGAGCAAGAAGACAACCCCAACCTCTTTCAGGTAACT
CCGGTGCCCACCTACGAGGAGATGTTGGCATGGGCGGAACAAGTGGACGC
ACGAATCGCGAAGGGAGAATTGTCACCGATTGGTTCTGGGCGACAGACGG
GGGACCGTGGAGGGGCCGACAGTGGTGGGGTAGACGGGGTGCTGGGCAGC
AACCAGGAGCAGATAGAGGTAACTCCGGTGCCCACCTACGAGGAGATGTT
GGCATGGGCGGAACAAGTGGACGCACGAATCGCGAAGGGAGAATTGTCAC
CGATTGGTTCTGGGCGACAGACGGGGGACCGTGGAGGGGCCGACAGTGGT
GGGGTAGACGGGGTGCTGGGCAGCAACCAGGAGCAGATAGAGCTGTCCAG
GGTATCCGAGCTGTTGATTAAGAGAAGACAGCAGAACGACCCTTTGTCAC
AGGCCGATGCCTCCGCATTGAGCTGTCCAGGGTATCCGAGCTGTTGATTA
AGAGAAGACAGCAGAACGACCCTTTGTCACAGGCCGATGCCTCCGCATTG
AGAGCTGCCCTGAATGCCGTCACTGGATTCGTCCAGGATGCTGGCGACGG
TTCCACATCGACTGAAAATTCTAGTGTCTCTGGAAATTTCTCAGAAATAT
CCATCTCGACGAAAGGAAACAGAAGCGACAATTCGGGCGAAGCGGGGGGA
GGCGGAACATCAGCGCCACAAGGAAGGAAGAACACCATCAACCATGTTGA
TAATCCTATCTATGGTTCTAGGGAGAGCTGCCCTGAATGCCGTCACTGGA
TTCGTCCAGGATGCTGGCGACGGTTCCACATCGACTGAAAATTCTAGTGT
CTCTGGAAATTTCTCAGAAATATCCATCTCGACGAAAGGAAACAGAAGCG
ACAATTCGGGCGAAGCGGGGGGAGGCGGAACATCAGCGCCACAAGGAAGG
AAGAACACCATCAACCATGTTGATAATCCTATCTATGGTTCTAGGGAGGT
GCGGGACACTGTGTATCTCTACGCGTGGTCGTTACTGAAGCGCCAACAAG
AAGAAGCCGACCTTGTGCAAGAGGAGGATAGTCGATAGGTGCGGGACACT
GTGTATCTCTACGCGTGGTCGTTACTGAAGCGCCAACAAGAAGAAGCCGA
CCTTGTGCAAGAGGAGGATAGTCGATAG back to top
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