prot_H-paniculata_contig1292.1833.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1292.1833.1
Unique Nameprot_H-paniculata_contig1292.1833.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length263
Homology
BLAST of mRNA_H-paniculata_contig1292.1833.1 vs. uniprot
Match: D7G7I8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I8_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.440e-13
Identity = 59/176 (33.52%), Postives = 83/176 (47.16%), Query Frame = 0
Query:   84 MLAWAEQVDARIAKGELSPIGSGRQTGDRGG-----ADSGGVDGVLGSNQEQIELSRVSELLIKRRQQNDPLSQADASALRAALNAVTGFVQDAGDGSTSTENSSVSGNFSEISISTKGNRSDNSGEAGGGGTSAPQGRKNTINHVDNPIYGSREVRDTVYLYAWSLLKRQQEEAD 254
            ML WAE+ D RIA G+L P+GS R     G      A+  G    L S+QEQ +++ +SELL               SALRAA+  ++  V+                   +++  T      + G+    G  A        + + N IYGSREVRD VYLYAWSL+K +Q+ A+
Sbjct:    1 MLVWAEETDRRIATGQLPPLGSRRPPSGDGAVTVTAAEQQGAGASLLSDQEQAQMATLSELLSXXXXXXXXXXXXXESALRAAIAGLSASVE-----------KDTDAKALDVAADTSSGPDTSDGDVTAAGHVAE-----AEDIIPNHIYGSREVRDQVYLYAWSLMKNRQDAAE 160          
BLAST of mRNA_H-paniculata_contig1292.1833.1 vs. uniprot
Match: A0A6H5JMF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF6_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 2.320e-10
Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = 0
Query:   71 NLFQVTPVPTYEEMLAWAEQVDARIAKGELSPIGSGRQ-TGDRG----GADSGGVDGVLGSNQEQIELSRVSELLIKRRQQNDPLSQADASALRAALNAVTGFVQ 170
            N  +VTPVPTYEEML WAE+ D RIA G+L P+GS R  +GD       A+  G    L S+ EQ +++ +SELL               SALRAA+  ++  V+
Sbjct:   33 NAIRVTPVPTYEEMLVWAEETDRRIATGQLPPLGSRRPPSGDAAVTVTAAEQQGAGACLLSDHEQAQMATLSELLSXXXXXXXXXXXXXESALRAAMAGLSASVE 137          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1292.1833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7I8_ECTSI1.440e-1333.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMF6_9PHAE2.320e-1041.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1292contigH-paniculata_contig1292:14152..26703 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1292.1833.1mRNA_H-paniculata_contig1292.1833.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1292 14027..27222 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1292.1833.1 ID=prot_H-paniculata_contig1292.1833.1|Name=mRNA_H-paniculata_contig1292.1833.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp
MPYSAGSSLSVSNAFIFASPSLLGSSVRDFPPLPGPWRSSCCITASTNQH
RRGFFRIQGADTGDEQEDNPNLFQVTPVPTYEEMLAWAEQVDARIAKGEL
SPIGSGRQTGDRGGADSGGVDGVLGSNQEQIELSRVSELLIKRRQQNDPL
SQADASALRAALNAVTGFVQDAGDGSTSTENSSVSGNFSEISISTKGNRS
DNSGEAGGGGTSAPQGRKNTINHVDNPIYGSREVRDTVYLYAWSLLKRQQ
EEADLVQEEDSR*
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