mRNA_H-paniculata_contig10263.178.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10263.178.1 vs. uniprot
Match: D8LBG5_ECTSI (Spermidine/spermine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBG5_ECTSI) HSP 1 Score: 845 bits (2183), Expect = 2.630e-299 Identity = 417/605 (68.93%), Postives = 484/605 (80.00%), Query Frame = 1 Query: 298 GIRLSKSGLSSDLRWITDPWDRGVLFSVKVGSVVHDVRSKFQHVQVLDTAAMGRMLVLDNALQCAERDEAGYHEMITHVPLCREGASTDSGKRALIIGGGDGGAAREVLRHEDIGAVDLVDVDAEVMAASKKFLPGVWRHPSSTDDLHVPLDNDPRLTVRAEDGFAFLAHENRENYDLIVVDASDPVGPGAALYSDDFYALLRRRLRPKGAVAVQGGSFWYLPMVFRTVFHGLKKAFPMVRPLQCFTAVYPGGVWNLQIATLGDDPQEVDFAKAEALCIRHPLMFYDGCGHHASFSVPPVALRELEKPPPSLRDTTTDLEEIMGYGEEEDNSYPSETGVSSRRWEPDVRRSLSRLVSGKTSMFNSHGRGSAPLAAFDADGTLWDGDAAEVFLAWMEASNRWSHHGKFISRYYSLLNDGNKRSAYGYVAQLFNGMDVAEVSRLCDECFQANMVHLVVPEMKELVQDLRARGWRVIIVTASPKWIVEPGARWLGLTSEDVIGIEVEISGRKATSVLRYPMPVREGKAEALKVSGEQVPQPCRLKMMFGEGPAFACGNSLDDGAMLSYARGLALVSNPSSLELEELAREKGWSVHHLQEEQ*QSATNE 2112 G+ ++KSGLS D ITDPWDRGVLFSVKV V+HD+RSKFQ VQVL+T AMGRMLVLDNALQCAERDEAGYHE ITH LCR+GA+ SGKRALIIGGGDGGAARE+LRH+D+ VDLVD+DAEVMAASKKF+PG+WRHP+S++D +VPLD+D RLTVRAEDG AFL ++RE YD+IVVDASDPVGPGAALYSD+FYA LRRRL+PKGAVAVQGGSFWYLP+VFRTVFHGLKKAFP VR LQCFTA+YPGG+WN+Q+ATLGDDPQ+VD KA LC H L FY GHHA+F++PPVAL+EL KP P L +T DLE IM YGEE +++ + + WEPDVRRSLSRLVSG T PLAAFDADGTLWDGD+AE+FL WM+ SNRWS H F++RYY+LL G+K+ AYG VAQLF+GM V+E+S+LC+ECFQ N+ LV+ EM ELVQDLRARGWRVIIVTASP WIVEPGAR LGL EDV+GIEVE+S KATS LR+P+PV+EGK EAL+++ P A GNSLDDGAML YARG ALVSNP+S ELE LAR+ GW +H L+ E SAT E Sbjct: 28 GVCVAKSGLSPDFSMITDPWDRGVLFSVKVDEVLHDIRSKFQRVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKGAAAGSGKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDIIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAIYPGGLWNIQLATLGDDPQDVDLEKANKLCNSHKLAFYSPQGHHAAFALPPVALQELAKPRPKLSETQADLESIMAYGEENEDTKGTPAHICDSCWEPDVRRSLSRLVSGATDK-------DVPLAAFDADGTLWDGDSAEIFLEWMDTSNRWSQHEDFVARYYALLASGDKKGAYGLVAQLFDGMLVSEISKLCEECFQENVEDLVISEMAELVQDLRARGWRVIIVTASPTWIVEPGARRLGLGPEDVLGIEVEVSQGKATSALRHPLPVQEGKVEALQMAFNSTR------------PTLAVGNSLDDGAMLGYARGFALVSNPNSAELESLARDSGWGIHRLEVE---SATLE 610
BLAST of mRNA_H-paniculata_contig10263.178.1 vs. uniprot
Match: A0A7S2UVX5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVX5_9STRA) HSP 1 Score: 301 bits (770), Expect = 2.680e-92 Identity = 145/249 (58.23%), Postives = 180/249 (72.29%), Query Frame = 1 Query: 574 RALIIGGGDGGAAREVLRHEDIGAVDLVDVDAEVMAASKKFLPGVWRHPSSTDDLHVPLDNDPRLTVRAEDGFAFLAHENRENYDLIVVDASDPVGPGAALYSDDFYALLRRRLRPKGAVAVQGGSFWYLPMVFRTVFHGLKKAFPMVRPLQCFTAVYPGGVWNLQIATLGDDPQEVDFAKAEALCIRHPLMFYDGCGHHASFSVPPVALRELEKPPPSLRDTTTDLEEIMGYGE-EEDNSYPSETGVS 1317 R L++GGGDGG+ARE LRH D+G VD VD+DAEV+ AS++ LP +WRHP ST D + L++DPRL +R DGF FL E YDLIVVDASDPVGPG+ALY+D FYA LR RLRP GAV+VQGGSFWYLP VFRTV+HGLK +FP+V+P QCFT+VYPGG+WNLQ+ATLGDDP EVD K A+ PL +Y H A+F +PP+A LE PP + D + +G E+ N+ S + +S Sbjct: 1 RVLVVGGGDGGSAREALRHPDVGHVDFVDIDAEVLRASRELLPSIWRHPHSTADQPLALEDDPRLNIRVMDGFEFLKDAEGEGYDLIVVDASDPVGPGSALYTDSFYASLRARLRPGGAVSVQGGSFWYLPAVFRTVYHGLKSSFPVVKPYQCFTSVYPGGIWNLQVATLGDDPAEVDPEKVSAIT-GAPLEWYTAHTHAAAFHLPPIAYAALEIPPAGMSAAGADSDGSFDHGSLEQKNNVESSSLLS 248
BLAST of mRNA_H-paniculata_contig10263.178.1 vs. uniprot
Match: A0A7S3NLF0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLF0_9STRA) HSP 1 Score: 294 bits (752), Expect = 4.810e-88 Identity = 152/328 (46.34%), Postives = 215/328 (65.55%), Query Frame = 1 Query: 301 IRLSKSGLSSDLRWITDPWDRGVLFSVKVGSVVHDVRSKFQHVQVLDTAAMGRMLVLDNALQCAERDEAGYHEMITHVPLCREGASTDSGKRALIIGGGDGGAAREVLRHEDIGAVDLVDVDAEVMAASKKFLPGVWRHPSSTDDLHVPLDNDPRLTVRAEDGFAFLAHENRENYDLIVVDASDPVGPGAALYSDDFYALLRRRLRPKGAVAVQGGSFWYLPMVFRTVFHGLKKAFPMVRPLQCFTAVYPGGVWNLQIATL--GDDPQEVDFAKAEALCI--RHPLMFYDGCGHHASF-SVPPVALRELEKPPPSLRDTTTDLEEIMG 1269 I + + GLS D R+++D W +GV++S + +V+ +V+S +Q + ++DT ++GR L+LD ALQCAE+DEAGYHEM+THVP+ R A S LIIGGGDGG ARE+L+++ +D+V++D V+ +KFLP V+ P+S + D R + ED F+ ++YDLI++DASDP+GPGA+LY+ FYA ++R LR +GAV Q GSF+YLP VFRTV+HGL FP+V P CFTAVYPGG WNL IATL D P++ + + L FYD H A+F S+PP+A EL K PPS+++ + +I G Sbjct: 51 ICIKRCGLSPDKRFVSDSWLKGVVWSADIKNVIMEVQSAYQQISIVDTVSLGRALILDGALQCAEKDEAGYHEMMTHVPMLRHKAGKISD--ILIIGGGDGGIAREILKYKYFERLDMVEIDQVVVDTCQKFLPRVF--PAS-------IAQDDRFHLFYEDAATFVTSAESQSYDLIIIDASDPIGPGASLYTPTFYAEIKRLLRREGAVVAQCGSFFYLPCVFRTVYHGLSAHFPVVMPYSCFTAVYPGGSWNLAIATLRPSDRPEKPHSRRIRGFLADQQEQLSFYDSAVHRAAFDSIPPLARNELAKGPPSIQELQAEFVDIYG 367
BLAST of mRNA_H-paniculata_contig10263.178.1 vs. uniprot
Match: A0A3M1TKL5_9DELT (Polyamine aminopropyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1TKL5_9DELT) HSP 1 Score: 275 bits (703), Expect = 4.420e-82 Identity = 148/297 (49.83%), Postives = 186/297 (62.63%), Query Frame = 1 Query: 301 IRLSKSGLSSDLRWITDPWDRG-VLFSVKVGSVVHDVRSKFQHVQVLDTAAMGRMLVLDNALQCAERDEAGYHEMITHVPLCREGASTDSGKRALIIGGGDGGAAREVLRHEDIGAVDLVDVDAEVMAASKKFLPGVWRHPSSTDDLHVPLDNDPRLTVRAEDGFAFLAHENRENYDLIVVDASDPVGPGAALYSDDFYALLRRRLRPKGAVAVQGGSFWYLPMVFRTVFHGLKKAFPMVRPLQCFTAVYPGGVWNLQIATLGDDPQEVDFAKAEALCIRHPLMFYDGCGHHASFSV 1188 I + LS W TD W G +L+SV V V+ D ++ +Q ++VL+T + GRM+VLD A+Q AE DEA YHE++ H LCR GAS KR L+IGGGDGGAARE LRH + VDLVD+D V A++ F P +W P + PLD+DPR + EDG FL ++ E YDLIVVD++DPVGPG L+S+ FYAL+ RP GA AVQGGSFWYLP V GL AF P C++ VYPGG+WNL +AT GDDP EVD +A AL FY H A F++ Sbjct: 5 IEILPDALSPSGDWYTDSWQPGALLWSVHVRRVLRDEQTPYQRLRVLETESHGRMMVLDEAVQVAESDEACYHELLVHPGLCRRGASQGP-KRVLVIGGGDGGAAREALRHPGVTHVDLVDIDPAVTRAARDFFPTLWVRPDGSG----PLDDDPRFHLHHEDGLTFLKGQS-EPYDLIVVDSTDPVGPGEVLFSNAFYALVAEHTRPGGAAAVQGGSFWYLPEVLERATTGLAAAFGRAEPYVCWSDVYPGGLWNLVLATFGDDPAEVDRERAGALT---GCRFYSAEVHPALFAL 292
BLAST of mRNA_H-paniculata_contig10263.178.1 vs. uniprot
Match: A0A7C6T0M1_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6T0M1_9FIRM) HSP 1 Score: 201 bits (511), Expect = 5.430e-55 Identity = 113/291 (38.83%), Postives = 164/291 (56.36%), Query Frame = 1 Query: 340 WITDPWDRGVLFSVKVGSVVHDVRSKFQHVQVLDTAAMGRMLVLDNALQCAERDEAGYHEMITHVPLCREGASTDSGKRALIIGGGDGGAAREVLRHEDIGAVDLVDVDAEVMAASKKFLPGVWRHPSSTDDLHVPLDNDPRLTVRAEDGFAFLAHENRENYDLIVVDASDPVGPGAALYSDDFYALLRRRLRPKGAVAVQGGSFWYLPMVFRTVFHGLKKAFPMVRPLQCFTAVYPGGVWNLQIATLGDDPQEVDFAKAEALCIRHPLMFYDGCGHHASFSVPPVALREL 1212 W T+ W G+ SV+V S+VH ++KFQ + + DT A+GR+LVLD+ +Q E DE YHE I HVPL + + LI+GGGDGG+ REVL+H + LVD+D V+ ASK+FLP W S DPR V +G F+A + +E YD+++VD++DP+GPG AL+ ++FY ++ LRP G ++ Q + ++P + RTVF + FP+ + YPGG W ATLG DP E + + L R +Y H +F +PP R + Sbjct: 4 WFTEEWVPGLELSVQVKSIVHKAKTKFQELAIYDTEALGRILVLDDVIQTTEIDEHIYHECIVHVPLLAH----PNPEEVLIVGGGDGGSLREVLKHPSVKRATLVDIDEGVIEASKRFLPQ-WNTGWS----------DPRARVVIANGLDFVA-KAKEEYDVVIVDSTDPIGPGEALFREEFYRSIKGALRPGGVMSAQTENPIFMPDLVRTVFGRVANVFPVAKLYTGPMPTYPGGFWCYTCATLGPDPSE-PVREPQGLAFR----YYSPEIHRRAFVLPPEVARSV 273
BLAST of mRNA_H-paniculata_contig10263.178.1 vs. uniprot
Match: A0A7C6ZCN3_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6ZCN3_9FIRM) HSP 1 Score: 199 bits (506), Expect = 4.220e-54 Identity = 112/292 (38.36%), Postives = 161/292 (55.14%), Query Frame = 1 Query: 340 WITDPWDRGVLFSVKVGSVVHDVRSKFQHVQVLDTAAMGRMLVLDNALQCAERDEAGYHEMITHVPLCREGASTDSGKRALIIGGGDGGAAREVLRHEDIGAVDLVDVDAEVMAASKKFLPGVWRHPSSTDDLHVPLDNDPRLTVRAEDGFAFLAHENRENYDLIVVDASDPVGPGAALYSDDFYALLRRRLRPKGAVAVQGGSFWYLPMVFRTVFHGLKKAFPMVRPLQCFTAVYPGGVWNLQIATLGDDPQEVDFAKAEALCIRHPLMFYDGCGHHASFSVPPVALRELE 1215 W T+ W G+ S ++ SVV ++K+Q + + DT GRMLVLDN +Q E+DE YHE + HVP+ ++ LIIGGGDGG+ REVLRH+ + +VD+D EV+AA+K+ LP W S DPR + EDG FLA +R YD+I+VD++DPVGP L+ DFY+L + L+P G A Q S P + R V+H + FP+ + YPGG W+ IA G DP E ++ + L +Y H +F +PP +++L+ Sbjct: 4 WFTEEWLPGLRISCQINSVVTRKKTKYQELCIFDTVEFGRMLVLDNVIQTTEKDEYIYHESLVHVPMFFH----PHPEKVLIIGGGDGGSLREVLRHKSVRQAFMVDIDGEVIAAAKEHLPA-WSSGFS----------DPRARLVVEDGREFLAR-SRSEYDVILVDSTDPVGPAEVLFQVDFYSLASKALKPGGCFAAQTESPIATPDLVRNVYHRIAACFPVAKIYTAPVPSYPGGWWSFTIAAFGGDPAEP--SRKPDVDFEGVLKYYSPEIHRRAFVLPPKIVKDLD 277
BLAST of mRNA_H-paniculata_contig10263.178.1 vs. uniprot
Match: A0A7C6LJF4_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6LJF4_9FIRM) HSP 1 Score: 196 bits (499), Expect = 2.630e-53 Identity = 113/291 (38.83%), Postives = 158/291 (54.30%), Query Frame = 1 Query: 340 WITDPWDRGVLFSVKVGSVVHDVRSKFQHVQVLDTAAMGRMLVLDNALQCAERDEAGYHEMITHVPLCREGASTDSGKRALIIGGGDGGAAREVLRHEDIGAVDLVDVDAEVMAASKKFLPGVWRHPSSTDDLHVPLDNDPRLTVRAEDGFAFLAHENRENYDLIVVDASDPVGPGAALYSDDFYALLRRRLRPKGAVAVQGGSFWYLPMVFRTVFHGLKKAFPMVRPLQCFTAVYPGGVWNLQIATLGDDPQEVDFAKAEALCIRHPLMFYDGCGHHASFSVPPVALREL 1212 W T+ W G+ S ++ SVV+ R+KFQ + + DT GRMLVLDN +Q E+DE YHE + HVPL S + ++ LIIGGGDGGA RE L+H + LVD+D EV+ A+K +LP W S D R V EDG ++A R+ +D+++VD+SDPVGP AL+ +FY+ + + LRP G + Q S P V R +FH + + FP+ R YPGG W+ +LG DP+ V K E L FY H F + P +++ Sbjct: 4 WFTEEWLPGLRISAQIKSVVYTKRTKFQELCIFDTVEFGRMLVLDNVIQTTEKDEYIYHESLVHVPLL----SHPNPEKVLIIGGGDGGALRETLKHPQVKEATLVDIDGEVIEAAKTYLPS-WSSSFS----------DKRARVLVEDGLNYVA-TTRDRFDVVLVDSSDPVGPSEALFRPEFYSSIAKVLRPGGMMCAQTESPIATPAVVRDIFHRISRVFPVTRLYTAPVPSYPGGWWSFTCGSLGSDPK-VPVRKPEE---SWELKFYSPEIHERLFILNPKLKKDV 274
BLAST of mRNA_H-paniculata_contig10263.178.1 vs. uniprot
Match: H1XQY3_9BACT (S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Caldithrix abyssi DSM 13497 TaxID=880073 RepID=H1XQY3_9BACT) HSP 1 Score: 200 bits (508), Expect = 8.370e-53 Identity = 117/289 (40.48%), Postives = 161/289 (55.71%), Query Frame = 1 Query: 340 WITDPWDRGVLFSVK-VGSVVHDVRSKFQHVQVLDTAAMGRMLVLDNALQCAERDEAGYHEMITHVPLCREGASTDSGKRALIIGGGDGGAAREVLRHEDIGAVDLVDVDAEVMAASKKFLPGVWRHPSSTDDLHVPLDNDPRLTVRAEDGFAFLAHENRENYDLIVVDASDPVGPGAALYSDDFYALLRRRLRPKGAVAVQGGSFWYLPMVFRTVFHGLKKAF-PMVRPLQCF-TAVYPGGVWNLQIATLGD-DPQEVDFAKAEALCIRHPLMFYDGCGHHASFSVPP 1194 W+TD D + S++ G V++D R+ +QHV+VL+T A G+ L LDN + C E+DE YHEM++H + G + K L+IGGGDGG REVLRH+ + V +V++D +V+ A++ LP + V D DPRL +R EDG F+A YDLIVVD++DP+GP L+S+ FY R L GA+ VQG + + VF + LK F P + F YP GVW+ QI G +P E D KA C H L +Y H ASF +PP Sbjct: 146 WLTDK-DENIALSLRHTGEVLYDERTPYQHVKVLNTYAFGKTLTLDNMIMCTEKDEFHYHEMMSHPLMMAHG----NVKNVLVIGGGDGGVVREVLRHDGVEKVTMVEIDGKVVEAARLHLP----------QIAVAFD-DPRLDLRIEDGIKFVADAPAGTYDLIVVDSTDPIGPAEGLFSETFYRNCHRILNDNGAMIVQGEAPRFNEQVFLDIHQTLKNIFGPKNAHIMLFHVPTYPTGVWSGQIGVKGSFNPAEFDEVKASEFCRAHQLKYYSPEIHKASFVLPP 418
BLAST of mRNA_H-paniculata_contig10263.178.1 vs. uniprot
Match: UPI0006474B80 (polyamine aminopropyltransferase n=1 Tax=Alistipes sp. ZOR0009 TaxID=1339253 RepID=UPI0006474B80) HSP 1 Score: 200 bits (508), Expect = 8.580e-53 Identity = 116/296 (39.19%), Postives = 155/296 (52.36%), Query Frame = 1 Query: 340 WITDPWDRGVLFSVKVGSVVHDVRSKFQHVQVLDTAAMGRMLVLDNALQCAERDEAGYHEMITHVPLCREGASTDSGKRALIIGGGDGGAAREVLRHEDIGAVDLVDVDAEVMAASKKFLPGVWRHPSSTDDLHVPLDNDPRLTVRAEDGFAFLAHENRENYDLIVVDASDPVGPGAALYSDDFYALLRRRLRPKGAVAVQGGSFWYLPMVFRTVFHGLKKAFPM--VRPLQCFTAVYPGGVWNLQIATLGD-DPQEVDFAKAEALCIRHPLMFYDGCGHHASFSVPPVALRELEK 1218 W TD D L G V++D S FQ +++DT A G L +DN + C E+DE YHEMI+H + GA K L+IGGGDGG REVLRH I V +V++D V+ ASK+FLP + R N P+LT+ DG +LA E+YDLI+VD SDPVGP L+S FY RR L P G + Q S + F + LK+ F V+ L YP G W+ Q+AT G+ D +V+ AE H L +Y+ H A+F++P R L + Sbjct: 146 WFTDKDDNQALSLRYTGEVLYDKTSPFQRTRIIDTYAYGTALTIDNMVMCTEKDETHYHEMISHPAILSHGAI----KNVLVIGGGDGGTIREVLRHSSIDKVTMVEIDENVIEASKQFLPSISRS-----------FNHPKLTLIIGDGIKYLAEAKPESYDLIIVDGSDPVGPAEGLFSKGFYENCRRALTPTGILVTQAESPLFNSHAFAELNVCLKEVFSKETVKTLLFHIPTYPSGTWSFQLATKGEVDVTKVEDECAERFGTNHLLNYYNAAVHRAAFALPNYVKRMLNE 426
BLAST of mRNA_H-paniculata_contig10263.178.1 vs. uniprot
Match: A0A7C6D858_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6D858_9FIRM) HSP 1 Score: 194 bits (493), Expect = 1.840e-52 Identity = 107/296 (36.15%), Postives = 163/296 (55.07%), Query Frame = 1 Query: 340 WITDPWDRGVLFSVKVGSVVHDVRSKFQHVQVLDTAAMGRMLVLDNALQCAERDEAGYHEMITHVPLCREGASTDSGKRALIIGGGDGGAAREVLRHEDIGAVDLVDVDAEVMAASKKFLPGVWRHPSSTDDLHVPLDNDPRLTVRAEDGFAFLAHENRENYDLIVVDASDPVGPGAALYSDDFYALLRRRLRPKGAVAVQGGSFWYLPMVFRTVFHGLKKAFPMVRPLQCFTAVYPGGVWNLQIATLGDDPQEVDFAKAEALCIRHP-----LMFYDGCGHHASFSVPPVALREL 1212 W T+ W G + +++ SVV+ R+K+QH+ + DT +GR+L LDN +Q E+ E YHE I HVPL S +S + LIIGGGDGG REV+RH ++ +VD+D +V+ ASK++LP +W NDPR TV EDG F+A E + +DL++VD++DP GPG AL++ +FY + + L+P G + Q S +P + R ++ + K FP+ + YPG +W+ A+ DP+ +R P L FY H + F + P R++ Sbjct: 4 WFTEEWVTGFMIGIQIESVVYIKRTKYQHLAIYDTVELGRILTLDNVIQTTEKYEYLYHEAIAHVPLF----SHESPEHVLIIGGGDGGTLREVMRHPEVKQAVMVDIDGDVIEASKQYLP-LWNTGF----------NDPRATVLVEDGLRFVA-ETDQKFDLVLVDSTDPEGPGLALFTPEFYQSIGKILKPGGMLCAQTESPLAMPAMVREIYQRIAKVFPVAKLYTAPVPSYPGSLWSFTCASFEADPENP---------LREPDDSWNLKFYSPEIHRSMFVLSPKIKRDV 274 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10263.178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10263.178.1 >prot_H-paniculata_contig10263.178.1 ID=prot_H-paniculata_contig10263.178.1|Name=mRNA_H-paniculata_contig10263.178.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=658bp MVRRHTVAAAAAAVSWNCIPTSGFVAPLALNSISTVLQQHPRTGARLSEHback to top mRNA from alignment at H-paniculata_contig10263:907..8863+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10263.178.1 ID=mRNA_H-paniculata_contig10263.178.1|Name=mRNA_H-paniculata_contig10263.178.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7957bp|location=Sequence derived from alignment at H-paniculata_contig10263:907..8863+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10263:907..8863+ >mRNA_H-paniculata_contig10263.178.1 ID=mRNA_H-paniculata_contig10263.178.1|Name=mRNA_H-paniculata_contig10263.178.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3948bp|location=Sequence derived from alignment at H-paniculata_contig10263:907..8863+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |