prot_H-paniculata_contig12829.1778.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12829.1778.1
Unique Nameprot_H-paniculata_contig12829.1778.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length201
Homology
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: D8LH04_ECTSI (Recombinase A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH04_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 1.290e-118
Identity = 190/201 (94.53%), Postives = 197/201 (98.01%), Query Frame = 0 
Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            MTLDIALGGGYPRGRVVEI+GPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYA+RLGVDV +LLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKA   MRKVTGSLSKSQCTVVF+NQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVR+KE+LRDN+GITVKVKV
Sbjct:  119 MTLDIALGGGYPRGRVVEIYGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYADRLGVDVADLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKA---MRKVTGSLSKSQCTVVFLNQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRRKESLRDNAGITVKVKV 316
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: K0SIK3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SIK3_THAOC)

HSP 1 Score: 315 bits (808), Expect = 1.240e-104
Identity = 163/201 (81.09%), Postives = 184/201 (91.54%), Query Frame = 0 
Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            MTLD ALGGGYP+GRVVEI+GPESSGKTTLALHALAE Q  GG+AAF+DAEHALDP+YA  LGVDVDNLLVSQPDSGEMALD+VDQLVRS+AVD++VVDSVAALVPRAELEGEM+DMQ+GLQARLMSKA   MRK+T SLS SQCTV+F+NQLRSK+GVIYGSPEVTSGGNALK+Y+SVRLD R++E L +N GI  KVK+
Sbjct:  101 MTLDTALGGGYPKGRVVEIYGPESSGKTTLALHALAEAQMNGGIAAFVDAEHALDPSYAAALGVDVDNLLVSQPDSGEMALDIVDQLVRSSAVDVIVVDSVAALVPRAELEGEMSDMQVGLQARLMSKA---MRKITASLSMSQCTVIFLNQLRSKVGVIYGSPEVTSGGNALKFYASVRLDTRRREVLPENMGIRAKVKI 298
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: B7FQ63_PHATC (Chloroplast-targeted nuclear-encoded recombinase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQ63_PHATC)

HSP 1 Score: 316 bits (809), Expect = 2.230e-104
Identity = 164/201 (81.59%), Postives = 186/201 (92.54%), Query Frame = 0 
Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD ALGGG+P+GRVVEI+GPESSGKTTLALHA+AE QK GG AAF+DAEHALDPAYA +LGVD+DNLLVSQPDSGEMALDVVDQLVRS AVD++VVDSVAALVPRAELEG+M+D Q+GLQARLMSKA   MRK+TGSL+ SQCTV+F+NQLRSK+GVIYGSPEVTSGGNALK+Y+SVRLD R+KE L +NSGI VKVKV
Sbjct:  118 LTLDAALGGGFPKGRVVEIYGPESSGKTTLALHAIAESQKVGGTAAFVDAEHALDPAYAAKLGVDIDNLLVSQPDSGEMALDVVDQLVRSAAVDVIVVDSVAALVPRAELEGDMSDAQIGLQARLMSKA---MRKITGSLALSQCTVIFLNQLRSKVGVIYGSPEVTSGGNALKFYASVRLDTRRKEILPENSGIRVKVKV 315
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A7R9UET2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UET2_9STRA)

HSP 1 Score: 314 bits (804), Expect = 9.950e-104
Identity = 159/201 (79.10%), Postives = 185/201 (92.04%), Query Frame = 0 
Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            MTLD+ALGGGYP+GRV+EI+GPESSGKTTLALHA+AE+QK GG+AAFIDAEHALDP+YA  LGV VDNLLVSQPDSGEMALD+VDQL+RS AV+++VVDSVAALVPR EL+G+M D Q+G QARLMSKA   +RK+TGSL+KS C+V+F+NQLRSK+GVIYGSPEVTSGGNALKYYSS+RLDVR+KE  R+N GITVKVKV
Sbjct:   95 MTLDLALGGGYPKGRVIEIYGPESSGKTTLALHAIAEVQKAGGMAAFIDAEHALDPSYAGNLGVHVDNLLVSQPDSGEMALDIVDQLIRSRAVEVIVVDSVAALVPRVELDGDMTDQQIGAQARLMSKA---LRKITGSLAKSNCSVIFLNQLRSKVGVIYGSPEVTSGGNALKYYSSLRLDVRRKEITRENKGITVKVKV 292
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: B5YLR6_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLR6_THAPS)

HSP 1 Score: 313 bits (803), Expect = 1.640e-103
Identity = 160/201 (79.60%), Postives = 186/201 (92.54%), Query Frame = 0 
Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD+ALGGGYP+GRV+EI+GPESSGKTTLALHALAE Q++GG+AAF+DAEHALDPAYA  LGVD+D+LLVSQPDSGEMALD+VDQLVRS AVD++VVDSVAALVPRAELEG+M+DMQ+GLQARLMSKA   +RK+T SLS SQCTV+F+NQLRSK+GVIYGSPEVTSGGNALK+Y+SVRLD R++E L DN GI  KVKV
Sbjct:  108 LTLDVALGGGYPKGRVIEIYGPESSGKTTLALHALAEAQQSGGIAAFVDAEHALDPAYAAALGVDIDSLLVSQPDSGEMALDIVDQLVRSAAVDVIVVDSVAALVPRAELEGDMSDMQVGLQARLMSKA---LRKITSSLSLSQCTVIFLNQLRSKVGVIYGSPEVTSGGNALKFYASVRLDTRRREVLPDNMGIRAKVKV 305
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A7S2XS40_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS40_9STRA)

HSP 1 Score: 313 bits (801), Expect = 5.890e-103
Identity = 160/201 (79.60%), Postives = 185/201 (92.04%), Query Frame = 0 
Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD ALG G+P+GR+VEI+GPESSGKTTLALHA+AE QK GG AAF+DAEHALDP YA+ LGVD+D LLVSQPDSGEMALD+VDQLVRS+AVD+VVVDSVAALVPRAELEG+M+DMQ+GLQARLMSKA   MRK+TGSL+ SQCTV+FINQLRSK+GVIYGSPEVT+GGNALK+Y+S+RLD R+KE L DN+GI VKVKV
Sbjct:  132 LTLDAALGNGFPKGRIVEIYGPESSGKTTLALHAIAESQKIGGTAAFVDAEHALDPVYAKNLGVDIDKLLVSQPDSGEMALDIVDQLVRSSAVDVVVVDSVAALVPRAELEGDMSDMQIGLQARLMSKA---MRKITGSLAMSQCTVIFINQLRSKVGVIYGSPEVTAGGNALKFYASIRLDTRRKEVLPDNAGIRVKVKV 329
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A7S3Q144_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q144_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.110e-102
Identity = 160/201 (79.60%), Postives = 186/201 (92.54%), Query Frame = 0 
Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD ALGGGYP+GRV+EI+GPESSGKTTLA+HA+AE QK GGVAAF+DAEHALDPAYA +LG+ VD+LLVSQPDSGEMALD+VDQLVRS+AVD++VVDSVAALVPRAELEG+M+D Q+GLQARLMSKA   MRK+TGSL+ S+CTV+FINQLRSK+GVIYGSPEVTSGG ALK+YSSVRLD+R+KE L DN+GI  KVKV
Sbjct:  115 LTLDAALGGGYPKGRVIEIYGPESSGKTTLAMHAIAESQKAGGVAAFVDAEHALDPAYASKLGIVVDDLLVSQPDSGEMALDIVDQLVRSSAVDVIVVDSVAALVPRAELEGDMSDQQIGLQARLMSKA---MRKITGSLAMSKCTVIFINQLRSKVGVIYGSPEVTSGGMALKFYSSVRLDIRRKEVLPDNAGIRAKVKV 312
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A7S0GDS0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GDS0_9STRA)

HSP 1 Score: 308 bits (790), Expect = 1.830e-101
Identity = 161/201 (80.10%), Postives = 183/201 (91.04%), Query Frame = 0 
Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD ALGGGYPRGRVVEI+GPESSGKTTLALHA+A  QK GG AAFIDAEHALDP+Y +RLGVDVD LLVSQPDSGEMALD+VDQLVRS+A+D++VVDSVAALVPRAELEG+M+D Q+GLQARLMSKA   +RK+TGSL+ SQ TV+FINQLRSK+GVIYGSPEVTSGGNALK+Y+SVRLD R+KE L +NSGI  KVKV
Sbjct:  125 LTLDAALGGGYPRGRVVEIYGPESSGKTTLALHAIASAQKDGGTAAFIDAEHALDPSYCDRLGVDVDALLVSQPDSGEMALDIVDQLVRSSALDVIVVDSVAALVPRAELEGDMSDQQIGLQARLMSKA---LRKITGSLAMSQTTVIFINQLRSKVGVIYGSPEVTSGGNALKFYASVRLDTRRKEVLPENSGIRCKVKV 322
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A6U9ZCX2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZCX2_9STRA)

HSP 1 Score: 308 bits (789), Expect = 3.110e-101
Identity = 161/202 (79.70%), Postives = 184/202 (91.09%), Query Frame = 0 
Query:    1 MTLDIALGGG-YPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD ALGGG +P+GRVVEI+GPESSGKTTLALH +AE QK GG AAF+DAEHALDP YAE LG+DVD+LLVSQPD GEMALD+VD+LVRS+AVDM+VVDSVAALVPRAELEG+M+D Q+GLQARLMSKA   MRK+TGSL+ SQCTV+F+NQLRSK+GVIYGSPEVTSGGNALK+YSSVRLD R+KE L DN+GI VKVKV
Sbjct:  124 LTLDAALGGGGFPKGRVVEIYGPESSGKTTLALHGIAECQKNGGTAAFVDAEHALDPVYAEALGIDVDDLLVSQPDCGEMALDIVDKLVRSSAVDMIVVDSVAALVPRAELEGDMSDTQIGLQARLMSKA---MRKITGSLALSQCTVIFLNQLRSKVGVIYGSPEVTSGGNALKFYSSVRLDTRRKEILPDNAGIRVKVKV 322
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: M2VY23_GALSU (Recombination protein RecA n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VY23_GALSU)

HSP 1 Score: 305 bits (781), Expect = 1.310e-100
Identity = 154/201 (76.62%), Postives = 183/201 (91.04%), Query Frame = 0 
Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD ALGGGYPRGR+VEIFGPESSGKTTLALHA+AE+QK+GGVAAF+DAEHALDPAY   LGVD+ +LLVSQPD+GEMAL++VDQLVRS AVD+VV+DSVAALVPR+E+EG+M D QMG QARLMSKA   +RK+TGS+S+SQCTV+F+NQLR KIGV++GSPEVTSGG ALKYYSSVRLD+R+K+ L+DN GI  KVK+
Sbjct:  100 VTLDAALGGGYPRGRLVEIFGPESSGKTTLALHAIAEVQKSGGVAAFVDAEHALDPAYGSALGVDIQSLLVSQPDTGEMALEIVDQLVRSAAVDIVVIDSVAALVPRSEIEGDMNDQQMGAQARLMSKA---LRKITGSMSRSQCTVIFLNQLRQKIGVLFGSPEVTSGGMALKYYSSVRLDIRRKDTLKDNVGIRCKVKI 297
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH04_ECTSI1.290e-11894.53Recombinase A n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
K0SIK3_THAOC1.240e-10481.09Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B7FQ63_PHATC2.230e-10481.59Chloroplast-targeted nuclear-encoded recombinase n... [more]
A0A7R9UET2_9STRA9.950e-10479.10Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
B5YLR6_THAPS1.640e-10379.60Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S2XS40_9STRA5.890e-10379.60Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3Q144_9STRA1.110e-10279.60Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S0GDS0_9STRA1.830e-10180.10Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6U9ZCX2_9STRA3.110e-10179.70Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
M2VY23_GALSU1.310e-10076.62Recombination protein RecA n=1 Tax=Galdieria sulph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013765DNA recombination and repair protein RecAPRINTSPR00142RECAcoord: 121..150
score: 27.82
coord: 169..197
score: 49.19
coord: 49..78
score: 75.28
coord: 83..112
score: 67.66
IPR013765DNA recombination and repair protein RecATIGRFAMTIGR02012TIGR02012coord: 1..201
e-value: 2.4E-100
score: 334.0
IPR013765DNA recombination and repair protein RecAPFAMPF00154RecAcoord: 1..200
e-value: 3.7E-101
score: 338.0
IPR013765DNA recombination and repair protein RecAPANTHERPTHR45900:SF1MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOGcoord: 1..201
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 13..187
e-value: 1.0E-10
score: 51.6
NoneNo IPR availableGENE3D3.40.50.300coord: 1..201
e-value: 1.1E-69
score: 237.1
NoneNo IPR availablePANTHERPTHR45900FAMILY NOT NAMEDcoord: 1..201
IPR020587DNA recombination and repair protein RecA, monomer-monomer interfacePROSITEPS50163RECA_3coord: 158..201
score: 19.014
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 1..153
score: 29.806
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12829contigH-paniculata_contig12829:80..6894 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12829.1778.1mRNA_H-paniculata_contig12829.1778.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12829 80..6900 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12829.1778.1 ID=prot_H-paniculata_contig12829.1778.1|Name=mRNA_H-paniculata_contig12829.1778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp
MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDA
EHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDS
VAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFI
NQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVK
V
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013765DNA_recomb/repair_RecA
IPR003593AAA+_ATPase
IPR020587RecA_monomer-monomer_interface
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase