mRNA_H-paniculata_contig12829.1778.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12829.1778.1
Unique NamemRNA_H-paniculata_contig12829.1778.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: D8LH04_ECTSI (Recombinase A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH04_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 4.280e-120
Identity = 192/203 (94.58%), Postives = 199/203 (98.03%), Query Frame = 1 
Query:    1 GSMTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 609
            GSMTLDIALGGGYPRGRVVEI+GPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYA+RLGVDV +LLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKA   MRKVTGSLSKSQCTVVF+NQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVR+KE+LRDN+GITVKVKV
Sbjct:  117 GSMTLDIALGGGYPRGRVVEIYGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYADRLGVDVADLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKA---MRKVTGSLSKSQCTVVFLNQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRRKESLRDNAGITVKVKV 316
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: K0SIK3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SIK3_THAOC)

HSP 1 Score: 319 bits (818), Expect = 4.110e-106
Identity = 165/203 (81.28%), Postives = 186/203 (91.63%), Query Frame = 1 
Query:    1 GSMTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 609
            GSMTLD ALGGGYP+GRVVEI+GPESSGKTTLALHALAE Q  GG+AAF+DAEHALDP+YA  LGVDVDNLLVSQPDSGEMALD+VDQLVRS+AVD++VVDSVAALVPRAELEGEM+DMQ+GLQARLMSKA   MRK+T SLS SQCTV+F+NQLRSK+GVIYGSPEVTSGGNALK+Y+SVRLD R++E L +N GI  KVK+
Sbjct:   99 GSMTLDTALGGGYPKGRVVEIYGPESSGKTTLALHALAEAQMNGGIAAFVDAEHALDPSYAAALGVDVDNLLVSQPDSGEMALDIVDQLVRSSAVDVIVVDSVAALVPRAELEGEMSDMQVGLQARLMSKA---MRKITASLSMSQCTVIFLNQLRSKVGVIYGSPEVTSGGNALKFYASVRLDTRRREVLPENMGIRAKVKI 298
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: B7FQ63_PHATC (Chloroplast-targeted nuclear-encoded recombinase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQ63_PHATC)

HSP 1 Score: 320 bits (819), Expect = 7.410e-106
Identity = 166/203 (81.77%), Postives = 188/203 (92.61%), Query Frame = 1 
Query:    1 GSMTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 609
            GS+TLD ALGGG+P+GRVVEI+GPESSGKTTLALHA+AE QK GG AAF+DAEHALDPAYA +LGVD+DNLLVSQPDSGEMALDVVDQLVRS AVD++VVDSVAALVPRAELEG+M+D Q+GLQARLMSKA   MRK+TGSL+ SQCTV+F+NQLRSK+GVIYGSPEVTSGGNALK+Y+SVRLD R+KE L +NSGI VKVKV
Sbjct:  116 GSLTLDAALGGGFPKGRVVEIYGPESSGKTTLALHAIAESQKVGGTAAFVDAEHALDPAYAAKLGVDIDNLLVSQPDSGEMALDVVDQLVRSAAVDVIVVDSVAALVPRAELEGDMSDAQIGLQARLMSKA---MRKITGSLALSQCTVIFLNQLRSKVGVIYGSPEVTSGGNALKFYASVRLDTRRKEILPENSGIRVKVKV 315
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A7R9UET2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UET2_9STRA)

HSP 1 Score: 318 bits (814), Expect = 3.300e-105
Identity = 161/203 (79.31%), Postives = 187/203 (92.12%), Query Frame = 1 
Query:    1 GSMTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 609
            GSMTLD+ALGGGYP+GRV+EI+GPESSGKTTLALHA+AE+QK GG+AAFIDAEHALDP+YA  LGV VDNLLVSQPDSGEMALD+VDQL+RS AV+++VVDSVAALVPR EL+G+M D Q+G QARLMSKA   +RK+TGSL+KS C+V+F+NQLRSK+GVIYGSPEVTSGGNALKYYSS+RLDVR+KE  R+N GITVKVKV
Sbjct:   93 GSMTLDLALGGGYPKGRVIEIYGPESSGKTTLALHAIAEVQKAGGMAAFIDAEHALDPSYAGNLGVHVDNLLVSQPDSGEMALDIVDQLIRSRAVEVIVVDSVAALVPRVELDGDMTDQQIGAQARLMSKA---LRKITGSLAKSNCSVIFLNQLRSKVGVIYGSPEVTSGGNALKYYSSLRLDVRRKEITRENKGITVKVKV 292
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: B5YLR6_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLR6_THAPS)

HSP 1 Score: 317 bits (813), Expect = 5.460e-105
Identity = 162/203 (79.80%), Postives = 188/203 (92.61%), Query Frame = 1 
Query:    1 GSMTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 609
            GS+TLD+ALGGGYP+GRV+EI+GPESSGKTTLALHALAE Q++GG+AAF+DAEHALDPAYA  LGVD+D+LLVSQPDSGEMALD+VDQLVRS AVD++VVDSVAALVPRAELEG+M+DMQ+GLQARLMSKA   +RK+T SLS SQCTV+F+NQLRSK+GVIYGSPEVTSGGNALK+Y+SVRLD R++E L DN GI  KVKV
Sbjct:  106 GSLTLDVALGGGYPKGRVIEIYGPESSGKTTLALHALAEAQQSGGIAAFVDAEHALDPAYAAALGVDIDSLLVSQPDSGEMALDIVDQLVRSAAVDVIVVDSVAALVPRAELEGDMSDMQVGLQARLMSKA---LRKITSSLSLSQCTVIFLNQLRSKVGVIYGSPEVTSGGNALKFYASVRLDTRRREVLPDNMGIRAKVKV 305
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A7S2XS40_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS40_9STRA)

HSP 1 Score: 315 bits (808), Expect = 5.580e-104
Identity = 161/203 (79.31%), Postives = 187/203 (92.12%), Query Frame = 1 
Query:    1 GSMTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 609
            G++TLD ALG G+P+GR+VEI+GPESSGKTTLALHA+AE QK GG AAF+DAEHALDP YA+ LGVD+D LLVSQPDSGEMALD+VDQLVRS+AVD+VVVDSVAALVPRAELEG+M+DMQ+GLQARLMSKA   MRK+TGSL+ SQCTV+FINQLRSK+GVIYGSPEVT+GGNALK+Y+S+RLD R+KE L DN+GI VKVKV
Sbjct:  130 GALTLDAALGNGFPKGRIVEIYGPESSGKTTLALHAIAESQKIGGTAAFVDAEHALDPVYAKNLGVDIDKLLVSQPDSGEMALDIVDQLVRSSAVDVVVVDSVAALVPRAELEGDMSDMQIGLQARLMSKA---MRKITGSLAMSQCTVIFINQLRSKVGVIYGSPEVTAGGNALKFYASIRLDTRRKEVLPDNAGIRVKVKV 329
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A7S3Q144_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q144_9STRA)

HSP 1 Score: 315 bits (806), Expect = 1.050e-103
Identity = 161/203 (79.31%), Postives = 188/203 (92.61%), Query Frame = 1 
Query:    1 GSMTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 609
            G++TLD ALGGGYP+GRV+EI+GPESSGKTTLA+HA+AE QK GGVAAF+DAEHALDPAYA +LG+ VD+LLVSQPDSGEMALD+VDQLVRS+AVD++VVDSVAALVPRAELEG+M+D Q+GLQARLMSKA   MRK+TGSL+ S+CTV+FINQLRSK+GVIYGSPEVTSGG ALK+YSSVRLD+R+KE L DN+GI  KVKV
Sbjct:  113 GALTLDAALGGGYPKGRVIEIYGPESSGKTTLAMHAIAESQKAGGVAAFVDAEHALDPAYASKLGIVVDDLLVSQPDSGEMALDIVDQLVRSSAVDVIVVDSVAALVPRAELEGDMSDQQIGLQARLMSKA---MRKITGSLAMSKCTVIFINQLRSKVGVIYGSPEVTSGGMALKFYSSVRLDIRRKEVLPDNAGIRAKVKV 312
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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A7S0GDS0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GDS0_9STRA)

HSP 1 Score: 312 bits (800), Expect = 6.090e-103
Identity = 163/203 (80.30%), Postives = 185/203 (91.13%), Query Frame = 1 
Query:    1 GSMTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 609
            GS+TLD ALGGGYPRGRVVEI+GPESSGKTTLALHA+A  QK GG AAFIDAEHALDP+Y +RLGVDVD LLVSQPDSGEMALD+VDQLVRS+A+D++VVDSVAALVPRAELEG+M+D Q+GLQARLMSKA   +RK+TGSL+ SQ TV+FINQLRSK+GVIYGSPEVTSGGNALK+Y+SVRLD R+KE L +NSGI  KVKV
Sbjct:  123 GSLTLDAALGGGYPRGRVVEIYGPESSGKTTLALHAIASAQKDGGTAAFIDAEHALDPSYCDRLGVDVDALLVSQPDSGEMALDIVDQLVRSSALDVIVVDSVAALVPRAELEGDMSDQQIGLQARLMSKA---LRKITGSLAMSQTTVIFINQLRSKVGVIYGSPEVTSGGNALKFYASVRLDTRRKEVLPENSGIRCKVKV 322
[Close]
BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A6U9ZCX2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZCX2_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.030e-102
Identity = 163/204 (79.90%), Postives = 186/204 (91.18%), Query Frame = 1 
Query:    1 GSMTLDIALGGG-YPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 609
            GS+TLD ALGGG +P+GRVVEI+GPESSGKTTLALH +AE QK GG AAF+DAEHALDP YAE LG+DVD+LLVSQPD GEMALD+VD+LVRS+AVDM+VVDSVAALVPRAELEG+M+D Q+GLQARLMSKA   MRK+TGSL+ SQCTV+F+NQLRSK+GVIYGSPEVTSGGNALK+YSSVRLD R+KE L DN+GI VKVKV
Sbjct:  122 GSLTLDAALGGGGFPKGRVVEIYGPESSGKTTLALHGIAECQKNGGTAAFVDAEHALDPVYAEALGIDVDDLLVSQPDCGEMALDIVDKLVRSSAVDMIVVDSVAALVPRAELEGDMSDTQIGLQARLMSKA---MRKITGSLALSQCTVIFLNQLRSKVGVIYGSPEVTSGGNALKFYSSVRLDTRRKEILPDNAGIRVKVKV 322
[Close]
BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: M2VY23_GALSU (Recombination protein RecA n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VY23_GALSU)

HSP 1 Score: 309 bits (791), Expect = 4.330e-102
Identity = 156/203 (76.85%), Postives = 185/203 (91.13%), Query Frame = 1 
Query:    1 GSMTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 609
            GS+TLD ALGGGYPRGR+VEIFGPESSGKTTLALHA+AE+QK+GGVAAF+DAEHALDPAY   LGVD+ +LLVSQPD+GEMAL++VDQLVRS AVD+VV+DSVAALVPR+E+EG+M D QMG QARLMSKA   +RK+TGS+S+SQCTV+F+NQLR KIGV++GSPEVTSGG ALKYYSSVRLD+R+K+ L+DN GI  KVK+
Sbjct:   98 GSVTLDAALGGGYPRGRLVEIFGPESSGKTTLALHAIAEVQKSGGVAAFVDAEHALDPAYGSALGVDIQSLLVSQPDTGEMALEIVDQLVRSAAVDIVVIDSVAALVPRSEIEGDMNDQQMGAQARLMSKA---LRKITGSMSRSQCTVIFLNQLRQKIGVLFGSPEVTSGGMALKYYSSVRLDIRRKDTLKDNVGIRCKVKI 297
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH04_ECTSI4.280e-12094.58Recombinase A n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
K0SIK3_THAOC4.110e-10681.28Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B7FQ63_PHATC7.410e-10681.77Chloroplast-targeted nuclear-encoded recombinase n... [more]
A0A7R9UET2_9STRA3.300e-10579.31Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
B5YLR6_THAPS5.460e-10579.80Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S2XS40_9STRA5.580e-10479.31Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3Q144_9STRA1.050e-10379.31Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S0GDS0_9STRA6.090e-10380.30Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6U9ZCX2_9STRA1.030e-10279.90Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
M2VY23_GALSU4.330e-10276.85Recombination protein RecA n=1 Tax=Galdieria sulph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12829contigH-paniculata_contig12829:80..6900 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.5
Seed ortholog evalue1.6e-95
Seed eggNOG ortholog2880.D8LH04
KEGG koko:K03553
KEGG Pathwayko03440,map03440
KEGG ModuleM00729
Hectar predicted targeting categoryother localisation
EggNOG free text desc.recombinase activity
EggNOG OGsCOG0468@1,KOG1433@2759
Ec32 ortholog descriptionDNA recombination and repair protein RecA
Ec32 orthologEc-14_001240.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03400
Exons4
Model size609
Cds size603
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12829.1778.1prot_H-paniculata_contig12829.1778.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12829 80..6894 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929003.2152927-CDS-H-paniculata_contig12829:79..1771622929003.2152927-CDS-H-paniculata_contig12829:79..177Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12829 80..177 -
1691480697.8925953-CDS-H-paniculata_contig12829:79..1771691480697.8925953-CDS-H-paniculata_contig12829:79..177Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12829 80..177 -
1622929003.2265553-CDS-H-paniculata_contig12829:1411..15231622929003.2265553-CDS-H-paniculata_contig12829:1411..1523Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12829 1412..1523 -
1691480697.9039564-CDS-H-paniculata_contig12829:1411..15231691480697.9039564-CDS-H-paniculata_contig12829:1411..1523Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12829 1412..1523 -
1622929003.2423885-CDS-H-paniculata_contig12829:4782..49461622929003.2423885-CDS-H-paniculata_contig12829:4782..4946Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12829 4783..4946 -
1691480697.918078-CDS-H-paniculata_contig12829:4782..49461691480697.918078-CDS-H-paniculata_contig12829:4782..4946Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12829 4783..4946 -
1622929003.265547-CDS-H-paniculata_contig12829:6665..68941622929003.265547-CDS-H-paniculata_contig12829:6665..6894Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12829 6666..6894 -
1691480697.9276805-CDS-H-paniculata_contig12829:6665..68941691480697.9276805-CDS-H-paniculata_contig12829:6665..6894Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12829 6666..6894 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929003.2786217-UTR-H-paniculata_contig12829:6894..69001622929003.2786217-UTR-H-paniculata_contig12829:6894..6900Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12829 6895..6900 -
1691480697.936716-UTR-H-paniculata_contig12829:6894..69001691480697.936716-UTR-H-paniculata_contig12829:6894..6900Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12829 6895..6900 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12829.1778.1

>prot_H-paniculata_contig12829.1778.1 ID=prot_H-paniculata_contig12829.1778.1|Name=mRNA_H-paniculata_contig12829.1778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp
MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDA
EHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDS
VAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFI
NQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVK
V
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mRNA from alignment at H-paniculata_contig12829:80..6900-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12829.1778.1 ID=mRNA_H-paniculata_contig12829.1778.1|Name=mRNA_H-paniculata_contig12829.1778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6821bp|location=Sequence derived from alignment at H-paniculata_contig12829:80..6900- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTTCTATGACTCTGGACATCGCACTGGGAGGGGGGTACCCAAGGGGGCG
CGTGGTGGAGATCTTCGGGCCGGAGAGTTCAGGTAAAACCACGCTCGCTC
TGCACGCGCTGGCGGAGATCCAGAAGACCGGAGGGGTGGCTGCTTTCATC
GATGCGGAGCATGCGCTCGACCCAGCCTACGCTGAAAGACTCGGAGTGGA
CGTGGACAACCTCTTGGTTTCGCAGCCGGATTCCGGTAAATATGAGTACA
AAAGGGACCCTAGACATCAATGAGGCATCATGTATCCAGCCAGCCAAAAA
AGGTACCACCTTGTCGTGTGGAAGTTCCCCCTTCGGATGTGACCCCCGTA
TTAAACTCTTGGGGCTCAGTCCTGAAGAAGGTGTCCAGGCAAAATATAGG
TGCCTTATTTTCATTGCCGCAACGTACGGGTGCTCCAGTGTGTTTGGGTT
TGAAAGCATGGAGGCGGAGGGGCGCTGGGGGTCATGTTGGTAGTCCCACC
CACGCATGCTCACCAGGTGAACTGAAGCTCTGAATAAACTGGAGGAATGT
TTGGATTTGCAGCTTGATGAATAGATAGACAGGATCCCGTTCACATGACA
TGGCCAAAATTGTGACATACATACATACTCACCATAACCAACTACCAGAA
ATTTTCACGCCTCTTCGATTACGCACTACATGGACTAGAGCAATCTTTAC
AAGGAAGAATCACTGACTGTATCACTCCCATGTTTACTGTAGGCAAAGCA
TTTCAATAGTCCGCATATGAAGGACTGGCACATGAAACTTACAGCAGCCC
TTGATTTTGCTACCTGAAATTCTCATTAGCAAATTAAATCTGCCACAGTC
ACTTGGAACTAAAATGACCAACGTCATACTAAAACTCGTTTGTACCCACG
TTGAGGGTATACAGCTGACTTTAACGTGCACTTGCCTAATGACACTTATC
AGCAAAATGGTATCAAACATGGAGGATTATGGCGGCGGTAGAGCAAGGCT
TTGGGTTGAACCAATACGTATTTTAACGTAGTTCATTGCCAGGCCGTTAA
TGTGCGGTTCTAGCGCTAAAATAATCTGTTCGTAATAATACACAGAGGTA
AAAATATTGCGTTATTCCATAGTATTCGGTATTCGGTACCAATACTTTGG
AAACAGTCGATTTCCCGTTCTCACTCCTACCGTACCGTTCGTTCTTTTTT
AAAGTACCGCCATCGAGAATACCCCCTGAAAATAGTATCAAGATGCGGCG
AGGGTATGTGGCTATTCATGTTCGTGGAGAGGATTTTTAGTGCTGTGTTG
GTTAAGGTTTGCCGAGGGAAACGCAGACTCACCAAGGAAGAACATTGACA
AAATGTCATGCGGTCTGAGTGTCGGGGAAGTAGACAAAGGAGTGTGTCCG
ACGTAAAGCAGCATCTACTACCGTCGTGGAAGTTGTATGTATAGTCAGGA
TCGGTTATCGTAATTTTTCATTACACAAACCGGAATTTTTTATCTGTCAC
CCCACCTCCGAATGAATTGGTGATGACTTGATGGAGATTTTGTCAAAAGA
TCAGTGGCAAGCGATAGGTGACACTCGTGTAAACATGTGGATAATGACCC
ATGTTTGTTCTGAAAATCGAAAGTTTTACCTCTAGTCCCATCGCGCTCTC
CTGCATGGAGTTAGCTTGATCCTCAGAATAATATACAGGCTTGGCGGCTA
GAGCTGTCGGGAGAAGAGGAGGTGAGAGGCAAGGAAGGGTCAGCTGTGCC
CAACCCGTAAAATAAAAACATGAGAGAGGTAGCTGTTCCATATTCCCGAA
CAAGCGTCCGTATAGGGTAGTCACAATGCCGAACCTTGACCTGCCGAGGC
GGCGTAAAGGAACAAATTAACGACAGTGCTGTGCCTGCTTGCTTGTCTCT
CTCACGTTGAAACAAGCGCTGAATCACGAACGCGCCGAAATCAAATAAAA
TCAGGCGAGATGGCCCTGGATGTAGTGGACCAGCTCGTTCGCTCCAACGC
GGTAGATATGGTGGTGGTTGACAGCGTGGCGGCGCTTGTGCCGCGGGCCG
AGCTGGAGGGGGAGATGGCGGACATGCAGATGGGTCTGCAAGCGCGCCTC
ATGAGCAAGGCACGTAACGTGTTTTAACAGTACTGTTAGAGTCATGGCTA
CTCCCGTGTATTGCGTGCTTTTCCCTCGTACCTACTGTTAATATCTTTCC
TCGTACCCATTAAGTCATTCTCCAAGACCCATGACCCATATACAAGGGCT
CGCTGCGTTTGCAGTGTCTCGCTACTATGCCCCCAGTGTAATTGTAGGCG
GAAGGTCCACAAAGGTTCGGTTTTACAAGTCACTCGAGGTCTCAGACTCG
GAAATGTGTTCCGGAGTGATGATCGCCTTTTCGCCTGAAAGTACGAGGTA
GGGATGTCTATAAATGATACGACGGAAGAGCCAAAGCGATCCAGGTCATG
TGACCGGCACCTCCCCGTGCGTCGTGGTGACCCCGAGCACCCATGGTCAT
TTGACAGCATTTACATGTCGGAGGGAGAAAATTTCAGTCGTAGTCAGGAG
CATATTGTGTGTGATGTTCAGGTCGCCGTTGGCCCTCACAGCTTTCATTT
TTTTATTTTTTAAACCCTGGAAAACTGAGGCAAAAACCTCTCTCCGATGC
TTCCATACTTGAGTATTTTACCAAAGTATTTCTACATTTCCTTTAGCAAA
ACAGAGTTATTTATTCCTCTGCGGGGTAGGCGCCACCCCGGTTCGGCCGA
ACCAATTAGGCAGTGTGGGGGTTGCACCCACTAAAAGACCTTTGACTAGA
CTTCCAGTCATGCTCAATTCACGAGCTACCCTACCCGTTCCGGCGTAGGT
CCGTGGACAGCTTTCATTTTACGTCATGGAGTTGGAAGATAAAAGGACAA
CGCATGTTGTAGCCAAGGTCATATGTATAGTTGGTTTTGATGCACAAGGC
CCCAGCCGTGCGTAAGGTTGGCATTTGTGAGTAAATTTTTGTCGAGCGCG
GGCTCGATAGGGCACGTGGAAAGTCGAAGCCGCGACGGCGTACTAAATAG
TTGTGCTGGGAGAAGAGAGAGGGTGAACGATGTGGTGAGGGTGCATGCAT
TGATGTAAGACGGTGCTGTGGAATACACCAAAAGCAATACCGATGGTCAA
TCGCATGTATCACAATATTGAAAACTGAAGCGAAAAAAACGTAGTAATGT
GCATACAATCGTACATACGTAGATGGACAAATGTCACACGAAAGACAATG
GGGCTAGGAAATTCCGGGGAAACGTCCGACAGGATCGACAAAAAAGAGAT
ATCAAGGCAAATATATACCTGTTATGAGATGTTGATTGCGGGACGTGGCA
GTCATTGTCTAAAGTGACGGTTCCATCCCCAGTCTCCGGGGTTATGTAAT
GTAGCCTCTATTGGAGTTGATAACGGCAAGCTCTCCAGCGTGCTACCCTT
CATCTATCAGACTTGTATCAACCCAGGGCTGACCCTGACAGTACAGCAAT
ATCCAGCTAATACAAGGAGAAAAAAGACCATTACCAAGGACTACATATAC
CACCCCAGCGGTACCGTTCTGAGAGTACTATACAGCACTGTCAGTAACAG
TACACAACAACGTACGTGTGTGAGATGGTCCACAATTCCACTGAAGTTAT
CATCATACCTGAAATTGAAGGGGAAACAAAAATCGAACCGTAGCCTTTAG
GGTAGGGACGGCCGTACGTCCCTCATGCCTTTACCTCGCCGATTCGAGAG
AGGGGAATGGAAAATCCAGAGTACAATCGAGATCTGGAGCACGCTGAGAC
AACGTTGTTGTAGGCATTCGTATCGCTACGGTAAAACACGCTCTGCACTT
TCATGCTAGTCGGACAGTGTAATTTCATTCATTGTACACTAAGTGGGTAC
ATTACCGTCACTATGTACGCAAGAAACATGCATCACATCATGACTCATAT
TTGGCTTCTTCGTCCATTGGTACAGAAAAACACGCTCGGTAGACTTGATT
TTTTTTTTTTTTTTTTACCCCCGGAAGGCTAAGGCAAAAACTTTTATCCG
ATGCTTCCATACCTAAAGTATTTCTACCGAAGTATTTCTACATTTCCTTT
AACAGAGCAGAGTTGTTTATTCCTCTGCGGGGGGTAGACTTGGTTTGCAG
GGGAAATTTTCTCTTGAGTTGAAATTGGCCAAAGGGTCTAGATTTTAGAG
GATGTGTCTGGTGAAAGGGATACAAGCGAGTCTTCACGTGGTGGTCAATC
CCACCAGTAGTGTCGCCAGAGGTTTTGCTTCTAGTGAGGGGATGATCCGT
TCTTTTTTAGGGCTGCCACACAACACGGACGAATCCCACGCGCTGGGGCG
GTCCTCCTTGATGATCTCCAGCTCGGCCACTTGTCATGCAATCAATAATT
ACACGCCGTGGGGGCATCCAATGAATCCCAAATGCTCGGAGGAATAGAGC
AAGAAAATAACTGTAGGCCTTCTGCGTTACTCTTTATGTCTGAAATTAAC
GCCTCGCTGAGCTATGGATGCCCCCACGGCGGGTTCGCGCGCGTTAGAGC
ACGACGGAGGCTGCGCACACGAAGCAGCGTAAGCCGACGCGCCGTGGACA
ATTCCATTTCAACCCACCTAACTATATGCATCCTCCTGTGCGTTTCCAAC
TAGGGGCAAAAAACACTCCTGGATTATTGATTTAATGGAATAATATCCTC
TGTTCTCTATCGCACCCCCGTCTGTCGGTGTTTGGCAGAGAGGATTTTGA
CCGTGGTCGATATAGTTTCTGAATATGGTATCGGTATATATGTCAATGGA
AAATGCTCCCAAGTTAAAGGTGTGGGTCGGAGCGCAAATAATTCATAAAA
CAATCGAGGACAGCCTGTGTGACTCGTTAACCCCGCTCTAGAAACACTTT
TGTGCCATCCGTATGGGCTGTTTGACGACAGTATTTTTATCTGTTGTTTT
TGGTGCCTTGATGCTGGCGACGGTCTTGGGGGCTTGGGACTTGTTTTTCC
TTGTACCTGTGCGCCGATTATAGGTGGGGGTCTATATCTTTCGTGTAGTT
CGTCTTTTGCATTTTGTGCCAATGACCAGCTTACGTATGTACTTGAAGTA
TGTACGTAGATGCCTTGCTGGTCAGTTGGGGGCGCTAGTGACCTTACGGT
TCGATTGGTACGCACCACAGGCGGCGTATTGCTGCTTGATGTCTGTGTTC
GATGCAAATTTCACTTGCGAAAGTGTGATAGAGATTTGTTTTTGACATAT
ATATATATATTTTGTGGGCGGATTGATTTCCAGTTACTCGGGGATATGAG
GTTATGTTGTATTAAACGCTGTTACTATGATTGTGTGTACATGTGTTTTT
TTTTATTGTTCTTTCTTTTTTCTGCAGGCAATGCGGAAAGTCACGGGGTC
TTTATCCAAGTCTCAGTGCACCGTTGTCTTTATCAACCAGCTGCGCTCCA
AGATTGGAGTCATATATGGAAGTCCCGAGGTTACAAGCGGTACGTACCGT
GTTTTTTTTTTCATGTGCTTTTGTACTACCGGCTGCTGCAGACAACGTTT
GGTAGATGCAATCGAGAGATACATGACATTTTTCCTGTACGGGGGGGGGA
GGCTCTCGCATACTCGTAACACCATTTGATATCGCACTCCTGATCTGATG
TTATTTTTGAAACTCGATTTTCTCGAGAACGATGCTCATGACATCGATAG
CGGGGAATCGTTTGCAGTAAACATCGTCAAGATCTTTCGGTATACCTGCT
GTTTCGGTAGTGAATGCTCTTGGTTCTCGAGGAAATCAAGTTTGAAAAAT
ATGATATCAGGGGGGTGTGATATCAAAAAGGGTGTTGCTGTATTATAAAT
GCGGGATGGGAATCATCGCGAATGGGCAACTATTGAGTCCTTGTTAGGTG
ATCGGGTAGATTCGATTTAGCTTTTCAAATCTGTGCGCAAGTAGCTTGAG
GCGAACGAACCTTGGGGTGAGCATGGCGAGTCACTGCGAGCGCAAGCGCA
GGGAGCAATTGTGTATACGTGTGGAGGACAAAGCACGAACTGCTAGGGTG
TGCTCAGCAATAGTAGCCGTGGCTTGTAGCAAGTGTCGTGATTCATGTTC
GAAAGGATTATCTGTTGTTGATTTCCCTGGGTAACTTCTCTCTGGAGGGC
ACCTTGCAATCCGTGCACTTCGGTGCATGGTGATGCATTTTCGGGAACGA
GTCTAAGCCCTAACGGGTAGGGCACGGCTAGGGGTAACCCATTGCCGATG
ACCGGACGCAAGTGTGATCAAGGGTTTTAACGAGTGCGGATTCTGCTTCT
CAAAGGACAGTCTAAAACCGAACGTCAAAATGGCCAAGTCTCATACAACG
GCTACCCCACAATTCCCTCGGTTCTTGAGCTTAGAACCGAGGGATGACCG
ACGTGATCATTAACCCGAGTTTTTCGGGGATCTAAATCGGGACTTCGTAC
CTGATACTTAGTCGTGGGATTAAGCTCCTTCCCTCACAGCACTTACGAGG
TATGTAGACAGAGGCTGCATATGCCGGGGTGTAAAGGAAAGTAGCCGTGG
CTCTTGTTCTACTGGACTACTTGTTCAAGTACTGAAGAATACTAAACCCT
AGTAATTACGTTGTGCCCCCAGTACTGCAATTTTTTTCAAATATTGTGTT
TCCAGTGATAACAACGATACGATGTCGCCGTTGTTTTATTCCTTTTCGGT
TTTTGAACCAACGAGCACACCAGGCGGCAACGCTCTCAAGTACTACTCCA
GTGTACGGCTGGACGTGCGGAAAAAGGAGGCATTGCGTGATAATTCGGGC
ATCACGGTCAAGGTTAAGGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig12829:80..6900-

>mRNA_H-paniculata_contig12829.1778.1 ID=mRNA_H-paniculata_contig12829.1778.1|Name=mRNA_H-paniculata_contig12829.1778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1206bp|location=Sequence derived from alignment at H-paniculata_contig12829:80..6900- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTCTGGACATCGCACTGGGAGGGGGGTACCCAAGGGGGCGCGTGGT
GGAGATCTTCGGGCCGGAGAGTTCAGGTAAAACCACGCTCGCTCTGCACG
CGCTGGCGGAGATCCAGAAGACCGGAGGGGTGGCTGCTTTCATCGATGCG
GAGCATGCGCTCGACCCAGCCTACGCTGAAAGACTCGGAGTGGACGTGGA
CAACCTCTTGGTTTCGCAGCCGGATTCCGATGACTCTGGACATCGCACTG
GGAGGGGGGTACCCAAGGGGGCGCGTGGTGGAGATCTTCGGGCCGGAGAG
TTCAGGTAAAACCACGCTCGCTCTGCACGCGCTGGCGGAGATCCAGAAGA
CCGGAGGGGTGGCTGCTTTCATCGATGCGGAGCATGCGCTCGACCCAGCC
TACGCTGAAAGACTCGGAGTGGACGTGGACAACCTCTTGGTTTCGCAGCC
GGATTCCGGCGAGATGGCCCTGGATGTAGTGGACCAGCTCGTTCGCTCCA
ACGCGGTAGATATGGTGGTGGTTGACAGCGTGGCGGCGCTTGTGCCGCGG
GCCGAGCTGGAGGGGGAGATGGCGGACATGCAGATGGGTCTGCAAGCGCG
CCTCATGAGCAAGGCACGTAACGCGAGATGGCCCTGGATGTAGTGGACCA
GCTCGTTCGCTCCAACGCGGTAGATATGGTGGTGGTTGACAGCGTGGCGG
CGCTTGTGCCGCGGGCCGAGCTGGAGGGGGAGATGGCGGACATGCAGATG
GGTCTGCAAGCGCGCCTCATGAGCAAGGCACGTAACGCAATGCGGAAAGT
CACGGGGTCTTTATCCAAGTCTCAGTGCACCGTTGTCTTTATCAACCAGC
TGCGCTCCAAGATTGGAGTCATATATGGAAGTCCCGAGGTTACAAGCGGC
AATGCGGAAAGTCACGGGGTCTTTATCCAAGTCTCAGTGCACCGTTGTCT
TTATCAACCAGCTGCGCTCCAAGATTGGAGTCATATATGGAAGTCCCGAG
GTTACAAGCGGCGGCAACGCTCTCAAGTACTACTCCAGTGTACGGCTGGA
CGTGCGGAAAAAGGAGGCATTGCGTGATAATTCGGGCATCACGGTCAAGG
TTAAGGTGGCGGCAACGCTCTCAAGTACTACTCCAGTGTACGGCTGGACG
TGCGGAAAAAGGAGGCATTGCGTGATAATTCGGGCATCACGGTCAAGGTT
AAGGTG
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