prot_H-paniculata_contig10261.175.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10261.175.1
Unique Nameprot_H-paniculata_contig10261.175.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length558
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10261.175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..91
e-value: 2.1E-17
score: 65.0
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 2..60
e-value: 8.5E-7
score: 28.6
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 2..61
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 2..61
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10261contigH-paniculata_contig10261:1421..4933 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10261.175.1mRNA_H-paniculata_contig10261.175.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10261 986..7612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10261.175.1 ID=prot_H-paniculata_contig10261.175.1|Name=mRNA_H-paniculata_contig10261.175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=558bp
MLEHLILSENELSGTIPVEFDRLTALEYLGLDSNMLQGPIPKELGKLTAL
RQLEIQDNDLQSQPDTGLEGNELQQWRGQKSRKSIKAGVKAPLAAAHPPL
GRDLPHVSDSFGHEHATVLETLISPSEHRVTEETDIMSEVGAGEQAAGFE
QERTQGKRALGSMRAFSTPWIPHRGSRRGSEVAVTNIAHTMAPRQASISI
GQLLATSIRTNIDHGEIAAEGQSWQPYKTLWSPQSLGISGGASGAESREE
TRKPEELSTSLGAVVEKTAMQSLAAPMDLQTPPMVPPRRIAWSSKLIWGV
QGIKETEAITQKELLASSSRSDEMGTTKNSQTSVKNSLLPAIKDLTPSEH
SLWKAENPAEYRGTVGRKGGTWMWDDEEKDSRANDTRRVRPDGLSETIFP
ADDLEKVPCTSKRIEANNVREIESRRRRCVTICDGTKEVTDVNHVYDSAT
FSTRSGRTPSGPAFFLQVGEAETRGTPSTTTMEVWTKPLGFGAFLESAES
ALSVYKVVEGAGVDVKVAVDTDNGDHGDAATAPTEESPRLRGEDMHARDD
GVVENEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt