prot_H-paniculata_contig1279.1749.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1279.1749.1
Unique Nameprot_H-paniculata_contig1279.1749.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length48
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1279.1749.1 vs. uniprot
Match: D7FVH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH9_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 8.070e-13
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 0 
Query:    1 VPPTDGSAFGSILGGVPKTTVVEGLVIPAQLDSVQATNFVLTQQARK 47
            VPPT+GS FGS + G  KTTVVEGLVIP++LD+VQATNFVLTQQ  K
Sbjct:  485 VPPTEGSVFGSTVKGPTKTTVVEGLVIPSRLDTVQATNFVLTQQPGK 531
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1279.1749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVH9_ECTSI8.070e-1374.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1279contigH-paniculata_contig1279:27059..27202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1279.1749.1mRNA_H-paniculata_contig1279.1749.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1279 27057..27202 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1279.1749.1 ID=prot_H-paniculata_contig1279.1749.1|Name=mRNA_H-paniculata_contig1279.1749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=48bp
VPPTDGSAFGSILGGVPKTTVVEGLVIPAQLDSVQATNFVLTQQARKS
back to top