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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1148 |
| Cds size | 1062 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1277.1739.1 >prot_H-paniculata_contig1277.1739.1 ID=prot_H-paniculata_contig1277.1739.1|Name=mRNA_H-paniculata_contig1277.1739.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=354bp
MESFRGFTFNGDAATPARITPARKNSGSGQILADRSSSRRSNDENENPAN
PATPMPASLGARGKTGRTSLHSTQKAFIQAATCMKTVHHPSTPMVAPPPP
SRRHLQNRNGELEGLFHTSEKDNAQLKQRVREMEAQIAAQAKAVKEQRAR
ADVADSAAAVALAETIKVKSDLEARTAEINRVHQAELAAARARAEAAKAE
AARVLSKIQKALETATKSAAAAKTAEATTKRHKEAAKAAEAAAKTAEASE
VRAQVDLRQARTAESKAKSAEAAAKFSDTRAQADLGRARAAEASARAAEA
AAKSSETRAHTELGHLKSAEVRVRAADAKVKAAAAKSQERITEIRRRLAS
IAER back to topmRNA from alignment at H-paniculata_contig1277:8517..10213+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1277.1739.1 ID=mRNA_H-paniculata_contig1277.1739.1|Name=mRNA_H-paniculata_contig1277.1739.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1697bp|location=Sequence derived from alignment at H-paniculata_contig1277:8517..10213+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCTTTCTGGGGTCTAGGCTGTATCTCTGAACCAGCCAGTAGCTTATGCG
CCAGCGCAGCATCGGCGAACGAGAGGTCTCGTTAAATGGAGAGCTTCCGA
GGGTTCACGTTCAATGGCGACGCCGCAACTCCTGCTCGTATAACACCTGC
CAGGAAGAATAGCGGCAGTGGACAAATCCTTGCCGACCGATCGTCGTCTC
GTCGTAGCAATGACGAAAACGAAAACCCCGCCAACCCTGCAACACCCATG
CCTGCATCCCTCGGGGCGCGGGGAAAGACAGGACGGACATCGCTTCACAG
CACCCAGAAGGCCTTCATACAGGTATGCTGTGTGTTTGCATGTGAGGAAT
GTAGAACAGGGCTGCTGTTTGAGTGGAACGTTGCATGTGTAAGATCTCCT
GGACTGTACTCGCTCTACTCTCTGCAGCTGGTTGTGCTGGCGCAGCAGCA
TCAGCAGCAGCAGCAGCAGCAGCTCGTTACTCTCAAGTACAAGCCAGGCA
TGCAGCCATCCTCGAGTAACAAGAGCTGCCAAGGGCCGGCGATTTCCCAT
GTAACTCATTCTCCGTGTCCCGGCTTGTTGAGGCGGAGAATGCAGTCACA
TACGCAAGGTATTGCAGACAGTGCTCATCGTTTGTTGTACACTCGATACT
GTCTGTAGGGTTACGTTCAATTCCCCCGCCCCAACATGCCACCATGTGAG
GTATGACTCTGTAGGGTCACGCCATGAACACGACGATGCGCAATTGAGTA
AGTACAGACGACACCAATGTGCTTACAGGGCGGCGCTGCATCTGATTTAC
CTTTCGCCCCCCCGGTCGAGGAATCCGCAGGCGGCTACTTGCATGAAGAC
CGTGCACCACCCATCAACGCCCATGGTCGCGCCTCCACCACCGTCCCGCG
GCGGGCAGGCCGCGGCTGCTAGTCAACTGATTGTTCAAAATCGTCATCTT
CAAAATAGAAACGGAGAGCTGGAGGGTCTGTTCCACACTTCCGAGAAGGA
CAACGCGCAGCTCAAGCAACGAGTTCGTGAGATGGAAGCTCAGATCGCTG
CGCAAGCAAAAGCCGTGAAGGAGCAACGAGCGAGAGCGGACGTCGCCGAC
TCGGCGGCAGCCGTTGCCTTGGCAGAGACCATTAAGGTGAAAAGTGACCT
CGAAGCTCGGACCGCCGAGATAAACCGGGTCCATCAGGCTGAGCTCGCAG
CCGCTCGAGCCCGTGCTGAAGCAGCTAAGGCCGAAGCTGCGCGTGTGCTG
TCGAAGATTCAAAAGGCCCTCGAGACCGCCACGAAATCGGCGGCCGCAGC
TAAAACGGCGGAAGCAACAACAAAGAGGCACAAGGAAGCAGCCAAGGCGG
CAGAGGCCGCAGCCAAGACTGCTGAGGCTTCTGAGGTGCGTGCGCAGGTC
GACTTGCGGCAGGCAAGAACCGCAGAATCCAAAGCGAAATCTGCGGAAGC
GGCTGCAAAATTTTCTGATACCCGTGCGCAGGCAGACTTGGGGAGGGCGA
GAGCTGCAGAGGCCAGTGCTAGAGCTGCTGAAGCGGCGGCGAAGTCTTCT
GAGACCCGTGCGCATACAGAGTTGGGGCATTTGAAATCTGCCGAAGTCAG
GGTAAGAGCGGCGGACGCTAAGGTAAAGGCAGCGGCCGCTAAGTCGCAAG
AAAGGATCACGGAAATACGTCGCAGGCTGGCATCTATCGCTGAACGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1277:8517..10213+ >mRNA_H-paniculata_contig1277.1739.1 ID=mRNA_H-paniculata_contig1277.1739.1|Name=mRNA_H-paniculata_contig1277.1739.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2124bp|location=Sequence derived from alignment at H-paniculata_contig1277:8517..10213+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGAGCTTCCGAGGGTTCACGTTCAATGGCGACGCCGCAACTCCTGC
TCGTATAACACCTGCCAGGAAGAATAGCGGCAGTGGACAAATCCTTGCCG
ACCGATCGTCGTCTCGTCGTAGCAATGACGAAAACGAAAACCCCGCCAAC
CCTGCAACACCCATGCCTGCATCCCTCGGGGCGCGGGGAAAGACAGGACG
GACATCGCTTCACAGCACCCAGAAGGCCTTCATACAGATGGAGAGCTTCC
GAGGGTTCACGTTCAATGGCGACGCCGCAACTCCTGCTCGTATAACACCT
GCCAGGAAGAATAGCGGCAGTGGACAAATCCTTGCCGACCGATCGTCGTC
TCGTCGTAGCAATGACGAAAACGAAAACCCCGCCAACCCTGCAACACCCA
TGCCTGCATCCCTCGGGGCGCGGGGAAAGACAGGACGGACATCGCTTCAC
AGCACCCAGAAGGCCTTCATACAGGCGGCTACTTGCATGAAGACCGTGCA
CCACCCATCAACGCCCATGGTCGCGCCTCCACCACCGTCCCGCGCGGCTA
CTTGCATGAAGACCGTGCACCACCCATCAACGCCCATGGTCGCGCCTCCA
CCACCGTCCCGCCGTCATCTTCAAAATAGAAACGGAGAGCTGGAGGGTCT
GTTCCACACTTCCGAGAAGGACAACGCGCAGCTCAAGCAACGAGTTCGTG
AGATGGAAGCTCAGATCGCTGCGCAAGCAAAAGCCGTGAAGGAGCAACGA
GCGAGAGCGGACGTCGCCGACTCGGCGGCAGCCGTTGCCTTGGCAGAGAC
CATTAAGGTGAAAAGTGACCTCGAAGCTCGGACCGCCGAGATAAACCGGG
TCCATCAGGCTGAGCTCGCAGCCGCTCGAGCCCGTGCTGAAGCAGCTAAG
GCCGAAGCTGCGCGTGTGCTGTCGAAGATTCAAAAGGCCCTCGAGACCGC
CACGAAATCGGCGGCCGCAGCTAAAACGGCGGAAGCAACAACAAAGAGGC
ACAAGGAAGCAGCCAAGGCGGCAGAGGCCGCAGCCAAGACTGCTGAGGCT
TCTGAGGTGCGTGCGCAGGTCGACTTGCGGCAGGCAAGAACCGCAGAATC
CAAAGCGAAATCTGCGGAAGCGGCTGCAAAATTTTCTGATACCCGTGCGC
AGGCAGACTTGGGGAGGGCGAGAGCTGCAGAGGCCAGTGCTAGAGCTGCT
GAAGCGGCGGCGAAGTCTTCTGAGACCCGTGCGCATACAGAGTTGGGGCA
TTTGAAATCTGCCGAAGTCAGGGTAAGAGCGGCGGACGCTAAGGTAAAGG
CAGCGGCCGCTAAGTCGCAAGAAAGGATCACGGAAATACGTCGCAGGCTG
GCATCTATCGCTGAACGACGTCATCTTCAAAATAGAAACGGAGAGCTGGA
GGGTCTGTTCCACACTTCCGAGAAGGACAACGCGCAGCTCAAGCAACGAG
TTCGTGAGATGGAAGCTCAGATCGCTGCGCAAGCAAAAGCCGTGAAGGAG
CAACGAGCGAGAGCGGACGTCGCCGACTCGGCGGCAGCCGTTGCCTTGGC
AGAGACCATTAAGGTGAAAAGTGACCTCGAAGCTCGGACCGCCGAGATAA
ACCGGGTCCATCAGGCTGAGCTCGCAGCCGCTCGAGCCCGTGCTGAAGCA
GCTAAGGCCGAAGCTGCGCGTGTGCTGTCGAAGATTCAAAAGGCCCTCGA
GACCGCCACGAAATCGGCGGCCGCAGCTAAAACGGCGGAAGCAACAACAA
AGAGGCACAAGGAAGCAGCCAAGGCGGCAGAGGCCGCAGCCAAGACTGCT
GAGGCTTCTGAGGTGCGTGCGCAGGTCGACTTGCGGCAGGCAAGAACCGC
AGAATCCAAAGCGAAATCTGCGGAAGCGGCTGCAAAATTTTCTGATACCC
GTGCGCAGGCAGACTTGGGGAGGGCGAGAGCTGCAGAGGCCAGTGCTAGA
GCTGCTGAAGCGGCGGCGAAGTCTTCTGAGACCCGTGCGCATACAGAGTT
GGGGCATTTGAAATCTGCCGAAGTCAGGGTAAGAGCGGCGGACGCTAAGG
TAAAGGCAGCGGCCGCTAAGTCGCAAGAAAGGATCACGGAAATACGTCGC
AGGCTGGCATCTATCGCTGAACGA back to top
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