Homology
BLAST of mRNA_H-paniculata_contig9654.17346.1 vs. uniprot
Match:
A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)
HSP 1 Score: 55.5 bits (132), Expect = 6.530e-8
Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = 1
Query: 1 MILFLHGNKDLIPDNEPALTEDQALGAIPGRRPNPVSDLQHLNGQFHTI 147
MILFLHGN DLIP++ LTE A IPGR NPV L+ L+G F +
Sbjct: 52 MILFLHGNLDLIPEDITKLTEAVARSKIPGRLANPVEGLEQLDGAFAPV 100
BLAST of mRNA_H-paniculata_contig9654.17346.1 vs. uniprot
Match:
A0A6H5KW12_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW12_9PHAE)
HSP 1 Score: 53.1 bits (126), Expect = 5.180e-7
Identity = 26/49 (53.06%), Postives = 31/49 (63.27%), Query Frame = 1
Query: 1 MILFLHGNKDLIPDNEPALTEDQALGAIPGRRPNPVSDLQHLNGQFHTI 147
MILFLHGN DLIP++ LTE A PGR NPV L+ L+G F +
Sbjct: 52 MILFLHGNLDLIPEDITTLTEAVARTMFPGRLANPVEGLKQLDGAFTPV 100
BLAST of mRNA_H-paniculata_contig9654.17346.1 vs. uniprot
Match:
A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)
HSP 1 Score: 54.7 bits (130), Expect = 1.230e-6
Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = 1
Query: 1 MILFLHGNKDLIPDNEPALTEDQALGAIPGRRPNPVSDLQHLNGQFHTI 147
MILFLHGN DLIP++ LTE A IPGR NPV L+ L+G F +
Sbjct: 436 MILFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPV 484
BLAST of mRNA_H-paniculata_contig9654.17346.1 vs. uniprot
Match:
A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)
HSP 1 Score: 53.5 bits (127), Expect = 3.210e-6
Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 1
Query: 1 MILFLHGNKDLIPDNEPALTEDQALGAIPGRRPNPVSDLQHLNGQFHTI 147
MI+FLHGN DLIP++ LTE A IPGR NPV L+ L+G F +
Sbjct: 663 MIMFLHGNLDLIPEDITKLTEAAARTKIPGRLANPVERLEQLDGVFAPV 711
BLAST of mRNA_H-paniculata_contig9654.17346.1 vs. uniprot
Match:
D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)
HSP 1 Score: 51.6 bits (122), Expect = 1.520e-5
Identity = 22/49 (44.90%), Postives = 30/49 (61.22%), Query Frame = 1
Query: 1 MILFLHGNKDLIPDNEPALTEDQALGAIPGRRPNPVSDLQHLNGQFHTI 147
M+LFLHGN DLIP+ P L ++ IPGR NP+ +L L+G +
Sbjct: 603 MVLFLHGNLDLIPEQIPELRDEDVQAKIPGRLSNPIPELHGLDGTLGLV 651
BLAST of mRNA_H-paniculata_contig9654.17346.1 vs. uniprot
Match:
A0A6H5KGU9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU9_9PHAE)
HSP 1 Score: 48.9 bits (115), Expect = 4.240e-5
Identity = 26/53 (49.06%), Postives = 32/53 (60.38%), Query Frame = 1
Query: 1 MILFLHGNKDLIPDNEPALTEDQALGA----IPGRRPNPVSDLQHLNGQFHTI 147
MILFLHGN DLIPD+ PAL D A +PGR NP L+ ++G F +
Sbjct: 70 MILFLHGNLDLIPDDIPALPTDGPDSATNKHMPGRLKNPNPKLERISGAFGPV 122
BLAST of mRNA_H-paniculata_contig9654.17346.1 vs. uniprot
Match:
D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)
HSP 1 Score: 49.7 bits (117), Expect = 7.320e-5
Identity = 27/61 (44.26%), Postives = 35/61 (57.38%), Query Frame = 1
Query: 1 MILFLHGNKDLIPDNEPALTEDQALGA---IPGRRPNPVSDLQHLNGQFHTILDDGDGEDE 174
M+LFLHGN DL+P+ P L D G IPGR NP+ +L L+G+F + D E E
Sbjct: 705 MVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLSNPMLELHALDGEFGPVDLTNDDESE 765
BLAST of mRNA_H-paniculata_contig9654.17346.1 vs. uniprot
Match:
A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE)
HSP 1 Score: 49.3 bits (116), Expect = 8.110e-5
Identity = 24/49 (48.98%), Postives = 31/49 (63.27%), Query Frame = 1
Query: 1 MILFLHGNKDLIPDNEPALTEDQALGAIPGRRPNPVSDLQHLNGQFHTI 147
MI+FLHGN +LIP++ LTE A PGR NPV L+ L+G F +
Sbjct: 199 MIMFLHGNLNLIPEDITKLTEVVARTKFPGRLANPVDGLEPLDGAFAPV 247
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9654.17346.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 8
0 1 Expect = 6.53e-8 / Id = 55.10 Expect = 5.18e-7 / Id = 53.06 Expect = 1.23e-6 / Id = 55.10 Expect = 3.21e-6 / Id = 53.06 Expect = 1.52e-5 / Id = 44.90 Expect = 4.24e-5 / Id = 49.06 Expect = 7.32e-5 / Id = 44.26 Expect = 8.11e-5 / Id = 48.98 Sequence A0A6H5KCJ3_9PHAE A0A6H5KW12_9PHAE A0A6H5JNY1_9PHAE A0A6H5JZ82_9PHAE D8LBK4_ECTSI A0A6H5KGU9_9PHAE D8LFP4_ECTSI A0A6H5JML0_9PHAE back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9654.17346.1
>prot_H-paniculata_contig9654.17346.1 ID=prot_H-paniculata_contig9654.17346.1|Name=mRNA_H-paniculata_contig9654.17346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=65bp
MILFLHGNKDLIPDNEPALTEDQALGAIPGRRPNPVSDLQHLNGQFHTIL back to top mRNA from alignment at H-paniculata_contig9654:7565..7839+
Legend: CDS polypeptide UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9654.17346.1 ID=mRNA_H-paniculata_contig9654.17346.1|Name=mRNA_H-paniculata_contig9654.17346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=275bp|location=Sequence derived from alignment at H-paniculata_contig9654:7565..7839+ (Halopteris paniculata Hal_grac_a_UBK monoicous)ATGATCCTGTTCTTGCACGGGAACAAGGACCTCATTCCTGACAACGAGCC
TGCGCTTACCGAGGATCAAGCGTTGGGTGCTATTCCTGGGCGGCGGCCAA
ACCCGGTCTCTGATTTACAACATCTCAACGGGCAGTTCCACACGATATTG
GACGACGGGGACGGAGAGGATGAGCACATTTTGGACATTTCATAG TTCAC
GGAGCATGAACCTAGTCTATAGTTTGTAGTTTTGTTGGGTCGGGTTACGG
AGTCTACCTCGACAGTATCCTTGGT back to top Coding sequence (CDS) from alignment at H-paniculata_contig9654:7565..7839+
>mRNA_H-paniculata_contig9654.17346.1 ID=mRNA_H-paniculata_contig9654.17346.1|Name=mRNA_H-paniculata_contig9654.17346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=390bp|location=Sequence derived from alignment at H-paniculata_contig9654:7565..7839+ (Halopteris paniculata Hal_grac_a_UBK monoicous) back to top