prot_H-paniculata_contig962.17319.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig962.17319.1
Unique Nameprot_H-paniculata_contig962.17319.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length660
Homology
BLAST of mRNA_H-paniculata_contig962.17319.1 vs. uniprot
Match: A0A6H5L7R8_9PHAE (ERCC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7R8_9PHAE)

HSP 1 Score: 523 bits (1346), Expect = 4.630e-176
Identity = 321/616 (52.11%), Postives = 378/616 (61.36%), Query Frame = 0
Query:    6 GRGRAGGRFAG------GXXXXXGCGSTSSGARGQ-----DVCACEANAPLVTELRKLDGECLQTGKQNLRHGVLRALKSVKLYPLPITTEAEACQLSGVGIFIARRMLKGLTESTAPAGNNHGEAHLDRENVAPPCSRRTQVSSSISQSKGRRGATATQQDDTPPAPNGDLDTELHCSQHHNDHFPSXXXXXXXXXXXXXXXSTTQNFRRVIIPAASVSLAANLSALRGDEEGDTVAGGGLLTSDVTPRRPKSRARLAPGKDMQGNAIGGGGGATGSLPDLDTEAPRFFSGTWEAILIVDNREHECMSVQSALLQKGVPCETRQLPLGDMIWVARRLDAPAPEAMVGYIIERKTAPDLAHSILDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQDKLAPTALRTALATSQACGGLAVVRCASLRDTLDFLARTHGHISSLLKRSSSPAGSTHGPTSITNPPALLFRTNPGTCPGNDARREGRCSPVTGNGNCGGQGPGPSFLRPTMTYDEYAQRCAKRAPTTTARHVLGAMVRQAPGCSAARAEAVVRAFESPLGFLLALERATVGGGSHDDDREIKVKRGEELLNGLRCSGGAGTNKLPQPLRRLLCRLFLEDSV 610
            GRGR GGRF G      G     G G + + A  +     D CAC +N PL+ EL+ LD ECL+TGK  LRHG++RA+KS+K YPLPITTE EAC L GVG F ARRML+GL  +     N+ G    D EN+ P        S S S   G    ++ +   T    N D  + L          PS               +TT    R +      SLA+N +ALRG        GG   T DVTP+RP SRAR    ++  G                 ++AP FFSG WEA L+VDNREHE MSVQS+LLQKG+ CETRQLPLGDM+W+AR+ D P  E ++GYI+ERKTA DLA SI+DGRY+EQKRRLKLSGLRRRIYLVEGNL+HQ++LAP ALRTAL +SQACGGLAVV+C  LRDT++FLARTH HI+SLL+ S                                 RRE   SPV G+  C G   G + LRP MTY EYAQ CAKRA +TT R VLGAMVRQAPGCSAARAEA+VRAF+SPLG +LALERA  G G   DD   ++KR + LL GL CSGGAGTNKLPQPLRRLLCRLFL DSV
Sbjct:    3 GRGR-GGRFGGQDGNSHGKIVASGRGGSDASALARVLNTADCCACVSNGPLLVELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEACALEGVGSFTARRMLRGLPPAGPEPENSSGVRRTDEENIEP--------SGSSSSRGGGARKSSNKSTGTSSVTNADAGSRL----------PSDTNSLLRMNLRVGSSATTTTGGRPL------SLASNFAALRG--------GGEETTPDVTPKRPTSRARK---EEASGETA------------RSSKAPSFFSGQWEAWLVVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKRDDPTSEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDGLRDTVNFLARTHRHIASLLELS--------------------------------CRREAGLSPVRGSRECSG---GRAMLRPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASGDGIAGDDA-ARMKRADALLGGLVCSGGAGTNKLPQPLRRLLCRLFLGDSV 534          
BLAST of mRNA_H-paniculata_contig962.17319.1 vs. uniprot
Match: A0A7S3XK47_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK47_HETAK)

HSP 1 Score: 117 bits (293), Expect = 1.470e-25
Identity = 99/315 (31.43%), Postives = 140/315 (44.44%), Query Frame = 0
Query:  304 VQSALLQKGVPCETRQLPLGDMIWVAR------RLDAPAPEAM--------------------------VGYIIERKTAPDLAHSILDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQDKLAPTALRTALATSQACGGLAVVRCASLRDTLDFLARTHGHISSLLKRSSSPAGSTHGPTSITNPPALLFRTNPGTCPGNDARREGRCSPVTGNGNCGGQGPGPSF--LRPTMTYDEYAQRCAKRAPTTTARHVLGAMVRQAPGCSAARAEAVVRAFESPLGFLLALERATVGGGSHDDDREIK--VKRGEELLNGL 582
            VQ+ LL  GV CE  QL +GDM+W AR        D P  + +                          +G+++ERKTA DLA SI+DGRY EQK RLK SGL +  YLVEG+LS QD L   +LRTA+A++    G +V RCA+L +++ +LARTH  +                                       AR+ G       +G+     P  SF  + P MTY  Y  +C K       + + G  ++Q PG S  + +A++  F +P   +   +R    G  HD D      V +G+    GL
Sbjct:    2 VQAKLLAVGVACEVGQLAVGDMVWAARWRRPGWHADIPLTQTLNQPQKKKSKSTATILENLHKNEELFVLGFVVERKTAEDLAKSIIDGRYAEQKVRLKKSGLSKVTYLVEGSLSGQDVLPTKSLRTAMASTLIQHGFSVQRCANLDESVRWLARTHHQV---------------------------------------ARQLGYAVAAAQSGD-----PLDSFKAVLPVMTYRHYHDQCGK-LKAQKVQDIFGMQLKQFPGMSVGKIQAILERFPTPQRLMDGYKRYVDEG--HDADHMFVDLVAKGQTRALGL 269          
BLAST of mRNA_H-paniculata_contig962.17319.1 vs. uniprot
Match: A0A7R9UCP7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCP7_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.080e-24
Identity = 72/148 (48.65%), Postives = 96/148 (64.86%), Query Frame = 0
Query:  291 ILIVDNREHECMSVQSALLQKGVPCETRQLPLGDMIWVA--RRLDAPAPEAMVGYIIERKTAPDLAHSILDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQDKLAPTALRTALATSQACGGLAVVRCASLRDTLDFLARTHGHISSLLK 436
            IL+ D+RE    +VQS LLQ+GV CE R L LGDMIW+A  RR D    E ++ +IIERK+A DLA SI+DGRY EQK RL+ SG+    YLVEG  S Q++L   ALRTA+A ++   G  V+   ++  + + L R H  I SL++
Sbjct:  437 ILVQDHRETRKDAVQSHLLQRGVSCENRALHLGDMIWIAQDRRSDV---EYVLDFIIERKSAADLAESIIDGRYAEQKSRLRASGIGHVTYLVEGAASSQERLPKQALRTAMAETRVLPGFRVLHTNNIAQSAEELRRMHEQIKSLMR 581          
BLAST of mRNA_H-paniculata_contig962.17319.1 vs. uniprot
Match: A0A067BND5_SAPPC (ERCC4 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BND5_SAPPC)

HSP 1 Score: 105 bits (262), Expect = 6.800e-21
Identity = 67/153 (43.79%), Postives = 90/153 (58.82%), Query Frame = 0
Query:  288 WEAILIVDNREHECMSVQSA----LLQKGVPCETRQLPLGDMIWVARRLD------APAPEAMVGYIIERKTAPDLAHSILDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQDKLAPTALRTALATSQACGGLAVVRCASLRDTLDFLARTHGH 430
            WE +L++D+RE    S +S     LL+ GV CE R L LGDM+W+ARR        A   E ++  I+ERK   DLA SI+D RY EQK+RL  +GLR  +YL+EG+L+ +  L  TAL TAL  +Q      V   AS  +T+ FL+  H H
Sbjct:   85 WEIVLLLDHREMVSRSNKSVFERKLLEAGVTCEVRGLHLGDMMWIARRHRPTFGGRAIEEEFVLDVIVERKAVSDLALSIIDKRYTEQKQRLADAGLRYVVYLLEGSLAVETILGATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWH 237          
BLAST of mRNA_H-paniculata_contig962.17319.1 vs. uniprot
Match: A0A448ZM14_9STRA (ERCC4 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZM14_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.120e-20
Identity = 63/171 (36.84%), Postives = 89/171 (52.05%), Query Frame = 0
Query:  280 APRFFSGTWEAILIVDNREHECMSVQSALLQKGVPCETRQLPLGDMIWVARRLDAPAP-------------------EAMVGYIIERKTAPDLAHSILDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQDKLAPTALRTALATSQACGGLAVVRCASLRDTLDFLARTHGHI 431
            AP+   GTW+ +L+VDNREH    V S+  Q G+PCE RQL +GDM W+AR++ +                      E +VG I+ERK   DLA S+   RY EQ+ RL   GL + ++LVEG+L          L  A+  ++   G +VVR  +L +T+  L   H  I
Sbjct:  187 APKALEGTWKVVLLVDNREHRSKQVVSSCKQAGIPCEERQLAIGDMAWIARKIPSSKKKDRAIGKGETETGAGETXLEVLVGTIVERKEVGDLASSLFGTRYAEQRLRLSQCGLPQVLFLVEGDLHALSNCPAETLEMAMMETRLQLGFSVVRTRNLPETVGILKTLHARI 357          
BLAST of mRNA_H-paniculata_contig962.17319.1 vs. uniprot
Match: T0QV44_SAPDV (ERCC4 domain-containing protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QV44_SAPDV)

HSP 1 Score: 105 bits (263), Expect = 3.050e-20
Identity = 76/186 (40.86%), Postives = 106/186 (56.99%), Query Frame = 0
Query:  288 WEAILIVDNREHECMSVQSA----LLQKGVPCETRQLPLGDMIWVARRL-----DAPAPEAMV-GYIIERKTAPDLAHSILDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQDKLAPTALRTALATSQACGGLAVVRCASLRDTLDFLARTHGH----ISSLLK-RSSSPAGSTHGPTSITNPPALL 458
            WE +L++D+RE    S  S     LL+ GV CE R L LGDMIW+ARR        P  E  V   ++ERK   DLA SI+D RY EQK+RL  +GLR  +YL+EG+L+ +  ++ TAL TAL  +Q      V   AS  +T+ FL+  H H    +S++ K R+++P  +     S+  PPA L
Sbjct:  276 WEVVLLLDHREMVSRSNPSVFERKLLEAGVTCEVRGLHLGDMIWIARRHRPTFGGRPITEEFVLDVVVERKAVTDLAMSIIDKRYTEQKQRLADTGLRYVVYLLEGSLAVETIVSATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRELSTVYKVRNAAPPAA----ASVGRPPASL 457          
BLAST of mRNA_H-paniculata_contig962.17319.1 vs. uniprot
Match: A0A1V9ZBA3_9STRA (Crossover junction endonuclease MUS81-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBA3_9STRA)

HSP 1 Score: 105 bits (261), Expect = 5.060e-20
Identity = 68/174 (39.08%), Postives = 94/174 (54.02%), Query Frame = 0
Query:  269 ATGSLPDLDTEAPRFFSGT--WEAILIVDNRE----HECMSVQSALLQKGVPCETRQLPLGDMIWVARRLDAP-----APEAMVGYIIERKTAPDLAHSILDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQDKLAPTALRTALATSQACGGLAVVRCASLRDTLDFLARTHGHI 431
            AT +L  L+ +      G   WE +L++D+RE          +  LL+  V CE R L LGDM+W+ARR           E ++  ++ERK   DLA SI+D RY EQK+RL  SGLR  +YLVEG+LS +  +    LRTAL  +Q      V   A+  +T+ FLA  H H+
Sbjct:  244 ATTNLAKLEPKIVPLAHGDDEWEVVLLLDHREMLSRRNPAVFERKLLEAHVTCEVRALHLGDMLWIARRGRQDQGRTVVEEFVLDVVVERKAVTDLALSIIDKRYTEQKQRLAESGLRYVVYLVEGSLSTETAIGAAGLRTALTRTQVLNNYLVHHAATADETVAFLAALHWHV 417          
BLAST of mRNA_H-paniculata_contig962.17319.1 vs. uniprot
Match: A0A067CHT1_SAPPC (ERCC4 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CHT1_SAPPC)

HSP 1 Score: 105 bits (261), Expect = 5.450e-20
Identity = 68/153 (44.44%), Postives = 89/153 (58.17%), Query Frame = 0
Query:  288 WEAILIVDNREHECMSVQSA----LLQKGVPCETRQLPLGDMIWVARRL-----DAPAPEAMV-GYIIERKTAPDLAHSILDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQDKLAPTALRTALATSQACGGLAVVRCASLRDTLDFLARTHGH 430
            WE +L++D+RE    S +S     LL+ GV CE R L LGDM+W+ARR        P  E  V   I+ERK   DLA SI+D RY EQK+RL  +GLR  +YL+EG+L+ +  L  TAL TAL  +Q      V   AS  +T+ FL+  H H
Sbjct:  276 WEIVLLLDHREMVSRSSKSVFERKLLEAGVTCEVRGLHLGDMMWIARRHRPTFGGRPIEEEFVLDVIVERKAVSDLALSIIDKRYTEQKQRLADAGLRYVVYLLEGSLAVETILGATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWH 428          
BLAST of mRNA_H-paniculata_contig962.17319.1 vs. uniprot
Match: A0A4D9DDT9_9STRA (ERCC4 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDT9_9STRA)

HSP 1 Score: 105 bits (261), Expect = 8.500e-20
Identity = 77/190 (40.53%), Postives = 97/190 (51.05%), Query Frame = 0
Query:  284 FSGT----WEAILIVDNREHECM-SVQSALLQKGVPCETRQLPLGDMIWVARRL----------------------DAPA-----------PEAMVGYIIERKTAPDLAHSILDGRYDEQKRRLKLSG--LRRRIYLVEGNLSH-QDKLAPTALRTALATSQACGGLAVVRCASLRDTLDFLARTHGHIS 432
            F GT    WE + ++D  EHE   S+++ LLQ G+ CE R L L D++WVARR                       DA              E M+ Y+IERKT PDLA SI DGRY EQK R+   G  + R  YLVEG L    D + P ALRTAL ++Q   G+ V++ ASL  T+  L R H  IS
Sbjct:  343 FGGTRPEEWEVVALLDRVEHENNPSIEATLLQAGIRCEVRVLRLADVLWVARRRAEGRLGGDGGGRAAAGIAVDPGDAGGLREGGHPTEEEEEIMLRYMIERKTVPDLASSIKDGRYREQKGRMLGVGREIDRAFYLVEGRLEQLNDMIRPAALRTALISTQVVHGMPVLQTASLDQTIALLQRMHTRIS 532          
BLAST of mRNA_H-paniculata_contig962.17319.1 vs. uniprot
Match: A0A1C7NCE9_9FUNG (Crossover junction endonuclease MUS81 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NCE9_9FUNG)

HSP 1 Score: 104 bits (260), Expect = 1.690e-19
Identity = 58/142 (40.85%), Postives = 85/142 (59.86%), Query Frame = 0
Query:  288 WEAILIVDNREHECMS----VQSALLQKGVPCETRQLPLGDMIWVARRLDAPAPEAMVGYIIERKTAPDLAHSILDGRYDEQKRRLKLSGLRRRIYLVEG-NLSHQDKLAPTALRTALATSQACGGLAVVRCASLRDTLDFL 424
            +E +L++D+RE +        +  L  KGV C TR L LGD IW+AR    P  E  + YI+ERK   DL  SI DGR+ EQK RLK SG  + IY+VE  N    ++    A++TA++++Q   G+ + R +S+ DT+D+L
Sbjct:  698 YEIVLVIDSREIQMKGKRDYFEQTLTAKGVSCITRSLDLGDAIWIARSKSNPPQELFLDYIVERKRLDDLVSSIKDGRFTEQKLRLKRSGAEKLIYVVEEYNREEAERFGAQAIQTAMSSTQIIDGIFLKRTSSIDDTIDYL 839          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig962.17319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7R8_9PHAE4.630e-17652.11ERCC4 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S3XK47_HETAK1.470e-2531.43Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7R9UCP7_9STRA1.080e-2448.65Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A067BND5_SAPPC6.800e-2143.79ERCC4 domain-containing protein n=1 Tax=Saprolegni... [more]
A0A448ZM14_9STRA1.120e-2036.84ERCC4 domain-containing protein n=1 Tax=Pseudo-nit... [more]
T0QV44_SAPDV3.050e-2040.86ERCC4 domain-containing protein n=2 Tax=Saprolegni... [more]
A0A1V9ZBA3_9STRA5.060e-2039.08Crossover junction endonuclease MUS81-like protein... [more]
A0A067CHT1_SAPPC5.450e-2044.44ERCC4 domain-containing protein n=1 Tax=Saprolegni... [more]
A0A4D9DDT9_9STRA8.500e-2040.53ERCC4 domain-containing protein n=2 Tax=Monodopsid... [more]
A0A1C7NCE9_9FUNG1.690e-1940.85Crossover junction endonuclease MUS81 n=1 Tax=Choa... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006166ERCC4 domainSMARTSM00891ERCC4_2coord: 291..385
e-value: 1.6E-23
score: 94.1
IPR006166ERCC4 domainPFAMPF02732ERCC4coord: 294..425
e-value: 1.5E-22
score: 80.5
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 44..114
e-value: 3.5E-5
score: 25.9
NoneNo IPR availableGENE3D3.40.50.10130coord: 317..455
e-value: 3.9E-35
score: 123.3
NoneNo IPR availablePANTHERPTHR13451CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 39..156
NoneNo IPR availablePANTHERPTHR13451CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 247..562
NoneNo IPR availablePANTHERPTHR13451:SF0CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 247..562
coord: 39..156
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 289..429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig962contigH-paniculata_contig962:7299..13480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig962.17319.1mRNA_H-paniculata_contig962.17319.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig962 7058..13488 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig962.17319.1 ID=prot_H-paniculata_contig962.17319.1|Name=mRNA_H-paniculata_contig962.17319.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=660bp
MSGWPGRGRAGGRFAGGRTGGRGCGSTSSGARGQDVCACEANAPLVTELR
KLDGECLQTGKQNLRHGVLRALKSVKLYPLPITTEAEACQLSGVGIFIAR
RMLKGLTESTAPAGNNHGEAHLDRENVAPPCSRRTQVSSSISQSKGRRGA
TATQQDDTPPAPNGDLDTELHCSQHHNDHFPSNNNNNSDNNKIDGAASTT
QNFRRVIIPAASVSLAANLSALRGDEEGDTVAGGGLLTSDVTPRRPKSRA
RLAPGKDMQGNAIGGGGGATGSLPDLDTEAPRFFSGTWEAILIVDNREHE
CMSVQSALLQKGVPCETRQLPLGDMIWVARRLDAPAPEAMVGYIIERKTA
PDLAHSILDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQDKLAPTALRTAL
ATSQACGGLAVVRCASLRDTLDFLARTHGHISSLLKRSSSPAGSTHGPTS
ITNPPALLFRTNPGTCPGNDARREGRCSPVTGNGNCGGQGPGPSFLRPTM
TYDEYAQRCAKRAPTTTARHVLGAMVRQAPGCSAARAEAVVRAFESPLGF
LLALERATVGGGSHDDDREIKVKRGEELLNGLRCSGGAGTNKLPQPLRRL
LCRLFLEDSVLVPPGDVEGLRDGDDRDDDGCCDVMPLSPDSVMPTNSDSV
MPTNSDSHC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006166ERCC4_domain
IPR027421DNA_pol_lamdba_lyase_dom_sf
IPR011335Restrct_endonuc-II-like