prot_H-paniculata_contig12751.1730.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig12751.1730.1
Unique Name	prot_H-paniculata_contig12751.1730.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	57

Homology

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BLAST of mRNA_H-paniculata_contig12751.1730.1 vs. uniprot
Match: A0A6H5K1D7_9PHAE (CULLIN_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D7_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 2.800e-23
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 0

Query:    1 MKARKTLAHTLLMSELFSQVKFPASTTDLKKRIESLIERDYLERDPSQPGMYRYLA 56
            MKARK LAHT+LMSELFSQVKFPA+  DLKKRIESLIERDYLERDP++PG YRYLA
Sbjct:  352 MKARKNLAHTMLMSELFSQVKFPATPVDLKKRIESLIERDYLERDPNKPGDYRYLA 407

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BLAST of mRNA_H-paniculata_contig12751.1730.1 vs. uniprot
Match: D7FQS5_ECTSI (CULLIN_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS5_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 6.150e-23
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 0

Query:    1 MKARKTLAHTLLMSELFSQVKFPASTTDLKKRIESLIERDYLERDPSQPGMYRYLA 56
            MKARK LAHT+LMSELFSQVKFPA+  DLKKRIESLIERDYLERDP++PG YRYLA
Sbjct:  695 MKARKNLAHTMLMSELFSQVKFPATPVDLKKRIESLIERDYLERDPNKPGDYRYLA 750

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BLAST of mRNA_H-paniculata_contig12751.1730.1 vs. uniprot
Match: A0A7S3REU1_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3REU1_9SPIT)

HSP 1 Score: 89.7 bits (221), Expect = 1.470e-19
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0

Query:    1 MKARKTLAHTLLMSELFSQVKFPASTTDLKKRIESLIERDYLERDPSQPGMYRYLA 56
            MKARKTLAH++LMSELF Q+KFP    DLKKRIESLI+R+YLERDP  P  YRYLA
Sbjct:  558 MKARKTLAHSILMSELFQQLKFPLKPADLKKRIESLIDREYLERDPKSPSTYRYLA 613

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BLAST of mRNA_H-paniculata_contig12751.1730.1 vs. uniprot
Match: A0A7S0YK13_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YK13_9CRYP)

HSP 1 Score: 85.1 bits (209), Expect = 2.200e-19
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0

Query:    1 MKARKTLAHTLLMSELFSQVKFPASTTDLKKRIESLIERDYLERDPSQPGMYRYLA 56
            MKARK+LAHTLL+SELF  +KFP +  DLKKRIESLIER+YLERD  QP +Y YLA
Sbjct:  123 MKARKSLAHTLLISELFKLLKFPVTPADLKKRIESLIEREYLERDKDQPTVYNYLA 178

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BLAST of mRNA_H-paniculata_contig12751.1730.1 vs. uniprot
Match: A0A7S0LG23_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LG23_9EUKA)

HSP 1 Score: 85.1 bits (209), Expect = 3.780e-19
Identity = 41/56 (73.21%), Postives = 46/56 (82.14%), Query Frame = 0

Query:    1 MKARKTLAHTLLMSELFSQVKFPASTTDLKKRIESLIERDYLERDPSQPGMYRYLA 56
            MKARK+L HTLLMSELF Q+KFP    DLKKRIESLI+R+YLERDP+    YRYLA
Sbjct:  148 MKARKSLTHTLLMSELFQQLKFPVKPADLKKRIESLIDREYLERDPNVSSGYRYLA 203

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BLAST of mRNA_H-paniculata_contig12751.1730.1 vs. uniprot
Match: D5ACL2_PICSI (Cullin_Nedd8 domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5ACL2_PICSI)

HSP 1 Score: 81.3 bits (199), Expect = 6.970e-19
Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 0

Query:    1 MKARKTLAHTLLMSELFSQVKFPASTTDLKKRIESLIERDYLERDPSQPGMYRYLA 56
            MK RK L+HTLL++ELF Q+KFP    DLKKRIESLI+R+YLERD S P +Y YLA
Sbjct:   31 MKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKSNPQIYNYLA 86

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BLAST of mRNA_H-paniculata_contig12751.1730.1 vs. uniprot
Match: A0A835ZG50_9STRA (Cullin family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG50_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 9.620e-19
Identity = 43/56 (76.79%), Postives = 46/56 (82.14%), Query Frame = 0

Query:    1 MKARKTLAHTLLMSELFSQVKFPASTTDLKKRIESLIERDYLERDPSQPGMYRYLA 56
            MKARKTL+H LLMSEL +Q+KFPA   DLKKRIESLIERDYLERD   P MY YLA
Sbjct:  746 MKARKTLSHPLLMSELMAQLKFPAKPLDLKKRIESLIERDYLERDEDNPTMYNYLA 801

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BLAST of mRNA_H-paniculata_contig12751.1730.1 vs. uniprot
Match: A0A7S4EYG7_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EYG7_CHRCT)

HSP 1 Score: 86.7 bits (213), Expect = 1.590e-18
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0

Query:    1 MKARKTLAHTLLMSELFSQVKFPASTTDLKKRIESLIERDYLERDPSQPGMYRYLA 56
            MKARK L+HTLL+SELF+Q+KFP    DLKKRIESLI+R+YLERDP+Q   YRYLA
Sbjct:  414 MKARKALSHTLLLSELFTQLKFPLKAQDLKKRIESLIDREYLERDPAQAAGYRYLA 469

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BLAST of mRNA_H-paniculata_contig12751.1730.1 vs. uniprot
Match: A0A6S9UJW4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9UJW4_CHRCT)

HSP 1 Score: 86.7 bits (213), Expect = 1.790e-18
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0

Query:    1 MKARKTLAHTLLMSELFSQVKFPASTTDLKKRIESLIERDYLERDPSQPGMYRYLA 56
            MKARK L+HTLL+SELF+Q+KFP    DLKKRIESLI+R+YLERDP+Q   YRYLA
Sbjct:  681 MKARKALSHTLLLSELFTQLKFPLKAQDLKKRIESLIDREYLERDPAQAAGYRYLA 736

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BLAST of mRNA_H-paniculata_contig12751.1730.1 vs. uniprot
Match: F0XYJ6_AURAN (Cullin_Nedd8 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYJ6_AURAN)

HSP 1 Score: 79.7 bits (195), Expect = 1.860e-18
Identity = 36/56 (64.29%), Postives = 46/56 (82.14%), Query Frame = 0

Query:    1 MKARKTLAHTLLMSELFSQVKFPASTTDLKKRIESLIERDYLERDPSQPGMYRYLA 56
            MKARKTL+H  L+ ++F+Q+K PAST D+K R+ESLIER+YLERDP   G+Y YLA
Sbjct:   15 MKARKTLSHAALLGDVFAQLKRPASTADVKARVESLIEREYLERDPRDAGVYNYLA 70

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig12751.1730.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig12751.1730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K1D7_9PHAE	2.800e-23	85.71	CULLIN_2 domain-containing protein n=1 Tax=Ectocar...	[more]
D7FQS5_ECTSI	6.150e-23	85.71	CULLIN_2 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A7S3REU1_9SPIT	1.470e-19	75.00	Hypothetical protein n=1 Tax=Strombidinopsis acumi...	[more]
A0A7S0YK13_9CRYP	2.200e-19	73.21	Hypothetical protein n=1 Tax=Hemiselmis tepida Tax...	[more]
A0A7S0LG23_9EUKA	3.780e-19	73.21	Hypothetical protein n=1 Tax=Coccolithus braarudii...	[more]
D5ACL2_PICSI	6.970e-19	67.86	Cullin_Nedd8 domain-containing protein n=1 Tax=Pic...	[more]
A0A835ZG50_9STRA	9.620e-19	76.79	Cullin family-domain-containing protein n=1 Tax=Tr...	[more]
A0A7S4EYG7_CHRCT	1.590e-18	73.21	Hypothetical protein n=1 Tax=Chrysotila carterae T...	[more]
A0A6S9UJW4_CHRCT	1.790e-18	73.21	Hypothetical protein n=1 Tax=Chrysotila carterae T...	[more]
F0XYJ6_AURAN	1.860e-18	64.29	Cullin_Nedd8 domain-containing protein (Fragment) ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019559	Cullin protein, neddylation domain	SMART	SM00884	Cullin_Nedd8_2	coord: 1..50 e-value: 3.1E-13 score: 59.9
IPR019559	Cullin protein, neddylation domain	PFAM	PF10557	Cullin_Nedd8	coord: 1..47 e-value: 2.5E-16 score: 59.5
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..56 e-value: 2.8E-22 score: 80.4
None	No IPR available	PANTHER	PTHR11932	CULLIN	coord: 1..56
None	No IPR available	PANTHER	PTHR11932:SF123	CULLIN 4, ISOFORM A-RELATED	coord: 1..56
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..18
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 19..56
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..13
IPR016157	Cullin, conserved site	PROSITE	PS01256	CULLIN_1	coord: 29..56
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 1..56

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig12751	contig	H-paniculata_contig12751:5458..5628 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig12751.1730.1	mRNA_H-paniculata_contig12751.1730.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig12751 5434..5628 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig12751.1730.1 ID=prot_H-paniculata_contig12751.1730.1|Name=mRNA_H-paniculata_contig12751.1730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=57bp
MKARKTLAHTLLMSELFSQVKFPASTTDLKKRIESLIERDYLERDPSQPG
MYRYLA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019559	Cullin_neddylation_domain
IPR036388	WH-like_DNA-bd_sf
IPR016157	Cullin_CS
IPR036390	WH_DNA-bd_sf