prot_H-paniculata_contig96.17303.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig96.17303.1
Unique Nameprot_H-paniculata_contig96.17303.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length67
Homology
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BLAST of mRNA_H-paniculata_contig96.17303.1 vs. uniprot
Match: A0A6H5JNQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ3_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.060e-26
Identity = 49/67 (73.13%), Postives = 58/67 (86.57%), Query Frame = 0 
Query:    1 MSSQNRSKMGKTFFKMTCSCPQQILGYGSCLQAKAAAG-LERGACEEEFSALKRCFQKAAKGVKASR 66
            MSSQNRSKMG+ F KMT +CPQQI GYG+CLQA + AG LERG C+E+F ALKRCFQ+AAKG+KA+R
Sbjct:    1 MSSQNRSKMGQAFAKMTTACPQQIAGYGTCLQAASTAGMLERGVCDEQFKALKRCFQQAAKGLKATR 67
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig96.17303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JNQ3_9PHAE1.060e-2673.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig96contigH-paniculata_contig96:45046..46303 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig96.17303.1mRNA_H-paniculata_contig96.17303.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig96 44985..46842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig96.17303.1 ID=prot_H-paniculata_contig96.17303.1|Name=mRNA_H-paniculata_contig96.17303.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
MSSQNRSKMGKTFFKMTCSCPQQILGYGSCLQAKAAAGLERGACEEEFSA
LKRCFQKAAKGVKASR*
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