mRNA_H-paniculata_contig96.17301.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig96.17301.1
Unique NamemRNA_H-paniculata_contig96.17301.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig96.17301.1 vs. uniprot
Match: D7FWR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR4_ECTSI)

HSP 1 Score: 411 bits (1056), Expect = 3.580e-129
Identity = 301/677 (44.46%), Postives = 400/677 (59.08%), Query Frame = 1 
Query:   16 EEREAAMVRAQMSVLMLGFYEIVRQVTQHCAERGRLLDRIWCSLNDLFEFVLKEMGDTVASCENQLLTMSRALERERTESEAREAAHKHELQMVEELLNGRWSKKVRQLREEEVQQGKRVANNEHTMNLLRNWLPNFEWYADSVLAKLLPPPAISGEQNAVDGVQTCTPLDPLEALERDLRRLQSAGLWAIVHSNERASSSESEAFASPSSLHDSDGRVSESDETDDGEDGSDQVKKRCSVVVAPTKMS----TAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMDDAITSMALGKLKTASPTNRTHKSNCNLFALLMQQGQNATVEADALRREVREAHQNSSLVAVRARKEALQLVQ-ACGRAQGAVFSFLADPTPTMKGIFPGLLQVLGMTTVPEHVSIIRANQP-LGVAGIHYTITSTVRALLAFRREAAMAATTQAAT-------AAPTVGSLSR-RRLEEFLYELELRRSGTVGVARAALRRLVASLLYWMPLP---------VDGGSGRTSTNGGGGVTPRPPAYGKLPRTMAGHETTAFTHNTLCCNNHTLCILPGQNNSGVLAAGNSFMAGVEGDDRERRSHQDSS---SAADNDTARNYGN---PSFSTTEECLWLRLFEAVESHTRPCRTEPQQGPTKPELVPLETAVSAVLTVFG 1959
            E R+AA +RAQM+VLM+GF+E++RQVTQHCAERGRLLDRIW SLN+LFEFVL EM  TVA CE +L  M+  +E+ER + E+RE  HK+ELQ+ EEL+NGRWSKKVRQL+++EV+ G  VA NE T+  L+ WLPNFE Y DSVLAK+LPP  +S        V +  PL P EALERDL R+ +AGLW +     R          S SS+ +   R S SD +    D S++  +  S +   T ++    TA   XXXXXXXXXXX        XXXXXXXXXXXXXXXXX                     +   ++  +  +L+QQG+ A + A+ALR E +EA + +S V   A++ A  L+Q ACGRA+G + S LADP PT    FPGLL+++GM ++ + V +IR++Q  LG+AG H  + +   AL+A+R                      P   SL R RRL +FLYE ELRRSG VG AR+A+RRLVASLL+W+P P         +   +           T RPP YG LPR++AGHE TA            LC+  G+ ++G  ++   F    E D     +H  ++   +A+  +++   G      FS  EECLWLR+F AVESH  PCRTEP+QGPT   LVPL+ A+++V  +FG
Sbjct:  138 EARKAAKIRAQMNVLMVGFFEVIRQVTQHCAERGRLLDRIWRSLNELFEFVLWEMSRTVARCEERLEVMNAVVEQERADRESRETIHKNELQLTEELINGRWSKKVRQLKDQEVRYGSIVAENERTVATLKQWLPNFETYGDSVLAKVLPPLPLSPPTQQQAAVVSAPPLSPQEALERDLNRIHAAGLWCV----RRDXXXXXXXSISDSSMVE---RSSNSDRSAGSGDLSNRGGRGTSPMTVRTPVNGRSGTAESGXXXXXXXXXXXRMSTAIATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTGVAGKRSLADRKMMDVLVQQGREAALRAEALRNETKEAEERASKVKADAKEHARDLLQQACGRAEGVILSLLADPAPTTPWPFPGLLELVGMKSLVDQVGVIRSSQGVLGIAGCHSCVIAAASALVAYRXXXXXXXXXXXXXXXXXXXXTVPAASSLLRPRRLGQFLYETELRRSGRVGRARSAVRRLVASLLFWLPPPPSLSARARQLAASAEEAGVTAPAQPTSRPPGYGHLPRSVAGHEKTALKQFQ-----SLLCVSNGEGSNGDGSSPGGFGGRGEIDPSAASAHNSNAGDATASPTESSSGDGGGVQDGFSEIEECLWLRVFAAVESHATPCRTEPRQGPTPAHLVPLDKAIASVEKIFG 802
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BLAST of mRNA_H-paniculata_contig96.17301.1 vs. uniprot
Match: A0A6H5JE25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE25_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 3.830e-33
Identity = 105/270 (38.89%), Postives = 131/270 (48.52%), Query Frame = 1 
Query: 1207 MTTVPEHVSIIRANQP-LGVAGIHYTITSTVRALLAFRREAAMAATTQAATA-------APTVGSLSR-RRLEEFLYELELRRSGTVGVARAALRRLVASLLYWMPLPVDGGSGRT-----STNGGGGVTP-----RPPAYGKLPRTMAGHETTAFTHNTLCCNNHTLCILPGQNNSGVLAAGNSFMAGVEGDDRERRSHQDSSSAADNDTARNYGNPSFSTTEECLWLRLFEAVESHTRPCRTEPQQGPTKPELVPLETAVSAVLTVFG 1959
            M ++ + V +IR++Q  LG+AG H  + +  RAL+A+RRE                    P   SL R RRL +FLYE ELRRSG VG AR+A+RRLVASLL+W+P      S R      S    G   P     RPP YG LPR   G     F                G+ +    +A NS      G   E  S                G   FS  EECLWLR+F AVESH  PCRTEP+QGPT   LVPL+ A+++V  +FG
Sbjct:    1 MKSLVDQVGVIRSSQGVLGIAGCHSCVIAAARALVAYRREXXXXXXXXXXXXXXXXXXXVPAASSLLRPRRLGQFLYETELRRSGRVGRARSAVRRLVASLLFWLPXXXXLSSPRARQLAASAEEAGVTVPAQPTFRPPGYGHLPRD--GSSAGGFGGR-------------GEIDPSAASAHNSNAGDATGSPTESGSGDGGG-----------GQDGFSEIEECLWLRVFAAVESHATPCRTEPRQGPTPAHLVPLDKAIASVEEIFG 244
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BLAST of mRNA_H-paniculata_contig96.17301.1 vs. uniprot
Match: A0A835Z723_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z723_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.190e-32
Identity = 84/192 (43.75%), Postives = 115/192 (59.90%), Query Frame = 1 
Query:   22 REAAMVRAQMSVLMLGFYEIVRQVTQHCAERGRLLDRIWCSLNDLFEFVLKEMGDTVASCENQLLTMSRALERERTESEAREAAHKHELQMVEELLNGRWSKKVRQLREEEVQQGKRVANNEHTMNLLRNWLPNFEWYADSVLAKLLPPPAISGEQNAVDGVQTCTPLDPLEALERDLRRLQSAGL---WAI 588
            +   +VR QM +L+LG  EI RQVT HCAERGRLLD+IW SLNDLFE+VL+EM   +A  + +L  +S ALE ER E  AR+A H H+L+  +E L+ +WS+ VR L+        R   NE    L++ WLP+F+ Y +SVL +LL  P     + A    +    +    AL  DL+RL+ AGL   W +
Sbjct:  270 KSVVLVRRQMDLLVLGLGEITRQVTFHCAERGRLLDKIWRSLNDLFEYVLREMSTALADSDGRLTDLSEALEAERAERRARDAQHAHDLRTTKEELSHKWSRVVRDLKGAAAGHAARAKQNEALTELVKRWLPSFDVYKESVLVRLLERP-----EGAPQAARRNPHVSAEHALAADLQRLKDAGLLGGWGV 456
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BLAST of mRNA_H-paniculata_contig96.17301.1 vs. uniprot
Match: A0A812Z5I2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812Z5I2_9DINO)

HSP 1 Score: 65.5 bits (158), Expect = 3.500e-8
Identity = 46/152 (30.26%), Postives = 76/152 (50.00%), Query Frame = 1 
Query:   16 EEREAAMVRAQMSVLMLGFYEIVRQVTQHCAERGRLLDRIWCSLNDLFEFVLKEMGDTVASCENQLLTMSRALERERTESEAREAAHKHELQMVEELLNGRWSKK----VRQLREEEVQQGKRVANNEHTMNLLRNWLPNFEWYADSVLAKL 459
            EE    MV+  + VL +G  E+VRQV+QHC ERG +L++IW +  +LFE  L E  + +   +++       L+R R E+   +A H  +L  + + L  ++ ++    V+QL     +      + E  ++    W P F  Y D VL  L
Sbjct:   86 EEDLTKMVQELVPVLSIGLNEVVRQVSQHCLERGVVLEKIWRTYVELFEQALGESREALRRQKDKTSKAEAELQRVRDEATELKAKHPAQLDKLRQTLTTKFDQRQNELVQQLTSTRSENRALKVHLEEQLSKQHAWFPMFAIYKDQVLPLL 237
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BLAST of mRNA_H-paniculata_contig96.17301.1 vs. uniprot
Match: A0A812MJD4_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812MJD4_9DINO)

HSP 1 Score: 62.4 bits (150), Expect = 4.880e-7
Identity = 43/147 (29.25%), Postives = 74/147 (50.34%), Query Frame = 1 
Query:   16 EEREAAMVRAQMSVLMLGFYEIVRQVTQHCAERGRLLDRIWCSLNDLFEFVLKEMGDTVASCENQLLTMSRALERERTESEAREAAHKHELQMVEELLNGRWSKK----VRQLREEEVQQGKRVANNEHTMNLLRNWLPNFEWYADS 444
            EE    MV+  + VL +G  E+VRQV+QHC ERG +L++IW +  +LFE  L E  + +   +++       L+R R E+   +A H  +L  + + L  ++ ++    V+QL     +      + E  ++    W P F  Y +S
Sbjct:   99 EEDLTKMVQELVPVLSIGLNEVVRQVSQHCLERGVVLEKIWRTYVELFEQALGESREALRRQKDKTSKAEAELQRVRDEATESKAKHPAQLDKLRQTLTTKFDQRQNELVQQLTSTRSENRALKVHLEEQLSKQHAWFPMFAIYKES 245
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BLAST of mRNA_H-paniculata_contig96.17301.1 vs. uniprot
Match: A0A812RL50_9DINO (Hypothetical protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812RL50_9DINO)

HSP 1 Score: 62.4 bits (150), Expect = 1.070e-6
Identity = 43/147 (29.25%), Postives = 74/147 (50.34%), Query Frame = 1 
Query:   16 EEREAAMVRAQMSVLMLGFYEIVRQVTQHCAERGRLLDRIWCSLNDLFEFVLKEMGDTVASCENQLLTMSRALERERTESEAREAAHKHELQMVEELLNGRWSKK----VRQLREEEVQQGKRVANNEHTMNLLRNWLPNFEWYADS 444
            EE    MV+  + VL +G  E+VRQV+QHC ERG +L++IW +  +LFE  L E  + +   +++       L+R R E+   +A H  +L  + + L  ++ ++    V+QL     +      + E  ++    W P F  Y +S
Sbjct:  115 EEDLTKMVQELVPVLSIGLNEVVRQVSQHCLERGVVLEKIWRTYVELFEQALGESREALRRQKDKTAKAEAELQRVRDEATELKAKHPAQLDKLRQTLTTKFDQRQNELVQQLTSTRSENRALKVHLEEQLSKQHAWFPMFAIYKES 261
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BLAST of mRNA_H-paniculata_contig96.17301.1 vs. uniprot
Match: A0A812L5V0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812L5V0_9DINO)

HSP 1 Score: 62.0 bits (149), Expect = 1.390e-6
Identity = 43/151 (28.48%), Postives = 75/151 (49.67%), Query Frame = 1 
Query:    4 KTKAEEREAAMVRAQMSVLMLGFYEIVRQVTQHCAERGRLLDRIWCSLNDLFEFVLKEMGDTVASCENQLLTMSRALERERTESEAREAAHKHELQMVEELLNGRWSKK----VRQLREEEVQQGKRVANNEHTMNLLRNWLPNFEWYADS 444
            K   EE    MV+  + VL +G  E+VRQV+QHC ERG +L++IW +  +LFE  L E  + +   +++       L+R R E+   +  H  +L+ + + L  ++ ++    V+QL     +      + E  ++    W P F  Y +S
Sbjct:   77 KELCEEDLTKMVQELVPVLSIGLNEVVRQVSQHCLERGVVLEKIWRTYVELFEQALGESREALRRQKDKTAKAEAELQRVREEAAELKVKHPAQLEKLRQTLTTKFDQRQNELVQQLTSTRSENRALKVHLEEQLSKQHAWFPMFAVYKES 227
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BLAST of mRNA_H-paniculata_contig96.17301.1 vs. uniprot
Match: A0A7S1WNL2_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WNL2_ALECA)

HSP 1 Score: 53.9 bits (128), Expect = 7.250e-5
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 1 
Query:   55 VLMLGFYEIVRQVTQHCAERGRLLDRIWCSLNDLFEFVLKE 177
            +L +G +EIVRQVTQHC ERG +L++IW +  DLFE  L E
Sbjct:  101 ILSIGLHEIVRQVTQHCLERGVVLEKIWRTYVDLFERALNE 141
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig96.17301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FWR4_ECTSI3.580e-12944.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JE25_9PHAE3.830e-3338.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z723_9STRA1.190e-3243.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A812Z5I2_9DINO3.500e-830.26Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A812MJD4_9DINO4.880e-729.25Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A812RL50_9DINO1.070e-629.25Hypothetical protein n=3 Tax=Symbiodinium TaxID=29... [more]
A0A812L5V0_9DINO1.390e-628.48Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A7S1WNL2_ALECA7.250e-558.54Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig96contigH-paniculata_contig96:32251..37011 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-21_004260.1
Exons12
Model size2022
Cds size2022
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig96.17301.1prot_H-paniculata_contig96.17301.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig96 32251..37011 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931190.6812992-CDS-H-paniculata_contig96:32250..323401622931190.6812992-CDS-H-paniculata_contig96:32250..32340Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 32251..32340 +
1691481631.2414815-CDS-H-paniculata_contig96:32250..323401691481631.2414815-CDS-H-paniculata_contig96:32250..32340Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 32251..32340 +
1622931190.7208607-CDS-H-paniculata_contig96:32559..326661622931190.7208607-CDS-H-paniculata_contig96:32559..32666Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 32560..32666 +
1691481631.251863-CDS-H-paniculata_contig96:32559..326661691481631.251863-CDS-H-paniculata_contig96:32559..32666Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 32560..32666 +
1622931190.737943-CDS-H-paniculata_contig96:32982..331021622931190.737943-CDS-H-paniculata_contig96:32982..33102Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 32983..33102 +
1691481631.2691448-CDS-H-paniculata_contig96:32982..331021691481631.2691448-CDS-H-paniculata_contig96:32982..33102Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 32983..33102 +
1622931190.7593899-CDS-H-paniculata_contig96:33472..335481622931190.7593899-CDS-H-paniculata_contig96:33472..33548Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 33473..33548 +
1691481631.2778533-CDS-H-paniculata_contig96:33472..335481691481631.2778533-CDS-H-paniculata_contig96:33472..33548Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 33473..33548 +
1622931190.7768652-CDS-H-paniculata_contig96:33882..339991622931190.7768652-CDS-H-paniculata_contig96:33882..33999Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 33883..33999 +
1691481631.2857196-CDS-H-paniculata_contig96:33882..339991691481631.2857196-CDS-H-paniculata_contig96:33882..33999Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 33883..33999 +
1622931190.7898104-CDS-H-paniculata_contig96:34522..345461622931190.7898104-CDS-H-paniculata_contig96:34522..34546Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 34523..34546 +
1691481631.2940078-CDS-H-paniculata_contig96:34522..345461691481631.2940078-CDS-H-paniculata_contig96:34522..34546Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 34523..34546 +
1622931190.8121114-CDS-H-paniculata_contig96:34587..349971622931190.8121114-CDS-H-paniculata_contig96:34587..34997Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 34588..34997 +
1691481631.306388-CDS-H-paniculata_contig96:34587..349971691481631.306388-CDS-H-paniculata_contig96:34587..34997Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 34588..34997 +
1622931190.827601-CDS-H-paniculata_contig96:35144..353101622931190.827601-CDS-H-paniculata_contig96:35144..35310Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 35145..35310 +
1691481631.323523-CDS-H-paniculata_contig96:35144..353101691481631.323523-CDS-H-paniculata_contig96:35144..35310Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 35145..35310 +
1622931190.8406901-CDS-H-paniculata_contig96:35651..357381622931190.8406901-CDS-H-paniculata_contig96:35651..35738Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 35652..35738 +
1691481631.3341603-CDS-H-paniculata_contig96:35651..357381691481631.3341603-CDS-H-paniculata_contig96:35651..35738Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 35652..35738 +
1622931190.8592942-CDS-H-paniculata_contig96:35979..364041622931190.8592942-CDS-H-paniculata_contig96:35979..36404Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 35980..36404 +
1691481631.3482857-CDS-H-paniculata_contig96:35979..364041691481631.3482857-CDS-H-paniculata_contig96:35979..36404Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 35980..36404 +
1622931190.8823962-CDS-H-paniculata_contig96:36448..365331622931190.8823962-CDS-H-paniculata_contig96:36448..36533Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 36449..36533 +
1691481631.35701-CDS-H-paniculata_contig96:36448..365331691481631.35701-CDS-H-paniculata_contig96:36448..36533Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 36449..36533 +
1622931190.904855-CDS-H-paniculata_contig96:36696..370111622931190.904855-CDS-H-paniculata_contig96:36696..37011Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 36697..37011 +
1691481631.3653488-CDS-H-paniculata_contig96:36696..370111691481631.3653488-CDS-H-paniculata_contig96:36696..37011Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig96 36697..37011 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig96.17301.1

>prot_H-paniculata_contig96.17301.1 ID=prot_H-paniculata_contig96.17301.1|Name=mRNA_H-paniculata_contig96.17301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=674bp
MKTKAEEREAAMVRAQMSVLMLGFYEIVRQVTQHCAERGRLLDRIWCSLN
DLFEFVLKEMGDTVASCENQLLTMSRALERERTESEAREAAHKHELQMVE
ELLNGRWSKKVRQLREEEVQQGKRVANNEHTMNLLRNWLPNFEWYADSVL
AKLLPPPAISGEQNAVDGVQTCTPLDPLEALERDLRRLQSAGLWAIVHSN
ERASSSESEAFASPSSLHDSDGRVSESDETDDGEDGSDQVKKRCSVVVAP
TKMSTAGGGGLVIPLVSPRNQQNEQAAVARDSNNNQQQRRTSSTTSMDDA
ITSMALGKLKTASPTNRTHKSNCNLFALLMQQGQNATVEADALRREVREA
HQNSSLVAVRARKEALQLVQACGRAQGAVFSFLADPTPTMKGIFPGLLQV
LGMTTVPEHVSIIRANQPLGVAGIHYTITSTVRALLAFRREAAMAATTQA
ATAAPTVGSLSRRRLEEFLYELELRRSGTVGVARAALRRLVASLLYWMPL
PVDGGSGRTSTNGGGGVTPRPPAYGKLPRTMAGHETTAFTHNTLCCNNHT
LCILPGQNNSGVLAAGNSFMAGVEGDDRERRSHQDSSSAADNDTARNYGN
PSFSTTEECLWLRLFEAVESHTRPCRTEPQQGPTKPELVPLETAVSAVLT
VFGQDSGATPGAGADAAAVRARGA
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mRNA from alignment at H-paniculata_contig96:32251..37011+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig96.17301.1 ID=mRNA_H-paniculata_contig96.17301.1|Name=mRNA_H-paniculata_contig96.17301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4761bp|location=Sequence derived from alignment at H-paniculata_contig96:32251..37011+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAACGAAAGCGGAAGAGAGAGAAGCGGCTATGGTTCGGGCACAGAT
GAGCGTGCTAATGCTAGGGTTCTACGAAATTGTTCGGCAGGTAAGCTCAT
ACTAAAGGTCTCTGAAAACGACGAGGAAACGGTGTTAGACCATCCACATT
CCCGGCCAATCCCAGCAACGAGATTGTTGCAGCGCTTGCTATGCAGAAGG
TCAAAAATGTTAGCAAAAAGTTCAACCTGGCTATCCTGCGAATAGCTTCA
AAACATGCCACAGTGAAGCACGTTCTCAAAATTTTATGAGTGCGTACCCG
GGACTCCAGGTGACCCAACACTGTGCAGAGCGCGGGCGGCTACTGGATAG
AATATGGTGCTCTCTCAACGACCTGTTCGAGTTTGTGCTGAAGGAGATGG
GGGATACTGTCGCCAGGTATCAAAGCACAAATTCGTTGGAGAACGGCTTT
TTTTAGCGTCATGTCATCATGGTGAGGCTTTTTCGCTTAAATCGTTGCTG
TGAGAGCTTTGTCCTGACGTGTGAACATGAACCCCGTGATCTCGACACCC
ACAAGTAAATCTTACCAACACCAAAATCGAGCGGTGACGCGTTCTTCCCT
TACCCCCTTCCAAAAGATTTTACGCGCTAAGCTAGTATTTCTCGTGCATT
TGGACCGTCGTTATGGGGACATGACACACTGCTGCCCTTGTCCCCCGTCT
CTCCATCCCGTGGGGGTTGGTGCTACCAAAAGCTGCGAAAACCAGTTGTT
GACCATGTCCCGGGCGTTGGAGCGGGAGCGCACTGAGAGTGAAGCTCGAG
AGGCGGCGCACAAACATGAACTTCAAATGGTGGAGGAGCTGCTAAACGGA
AGGTACGTGATTGCGCCGCGAGGAAGATTCGGTGGGGCGTTAGAACATTA
CAAAATTTTGTTGAATAGATATGATTTGACACCATTCAGCTGAAGTCTGA
CGAAAAACGGATACCTTCAGGCATAGTCCATTCGATTTTGCCGGTTTTCA
TTTGTATTGCCTTGACAGGCAGGGCACAAGAAGCGGTAAGATATGGAACA
CCAGCTTTACCTGATGAAAGAAATGGCGCATGGTTGCACATGCCGTTCTG
ATTACTTTCTCCCAAGCACCAAGAACCAGAAAATCGCGCGTGTGTTTTCC
TGTCACTCTCACGCGATCGTGGTTCTGCGTTTGGTTCCGGCCATGTGGCA
TACTCGGGACGCCGTTGTGCAGATGGTCAAAGAAAGTTCGACAGCTAAGG
GAAGAAGAAGTCCAGCAGGGTAAACGCGTCGCCAATAACGAGCATACGGT
AAGATACGGTGGACCAGCTACTGATCACAAATCTGTCGCGGAAACTGTGT
AGGCGCATTTCCGATTGTTTGAAAACAGTGCTGTCCTGTAGCGCAAGCCA
AGCGCATATTTAACGAGATGAAAAAACGTTACCGCGTCTTGACTTTTCCC
GCGGCGTTGGCGGCTCAGTCTAAATAGTACGTTCGCTCTACTCATAGATA
TCACCCCACTCCCGTGCTATCAAAGAAATAATCATTTATGTGCAGCCACG
AAATGAAGTCTTACGTGCGATGTCCACGTCTGTAATGTAGTTCGCGCTCT
ACAACTCCCCTTGACACCCTTGCCCACACCAGATGAACCTTTTACGCAAT
TGGCTGCCGAATTTTGAATGGTACGCCGATTCTGTCCTGGCGAAGCTGCT
ACCTCCGCCTGCGATATCTGGAGAACAAAATGCGGTCGACGGTGTGCAGG
TATTTCATTCAATGTAATACTTTTTTTGCGTGAGTGTTGTGTTTGAGGTG
AAGACGCCTTTAGTGGTCGAATCACGTAAATGACTTCGAGGAACAGTTGA
TTCGCAGGTCTCATTGATACGTATCCATCCTCGGAATGCCTGTTGGTGTT
TGGTACTGACTTATCACGTGCTGAAAACTCGGCAGAACGCCAGGGTAGGG
TTGGAAGCGATCGCCCGGGAAACCACCGACTATACCTGTCACTGTTTATT
TTTTAGTTCCCTGTGGCTTACGTAGGTACAGTCTCTGCAAATAATGTAGC
GTCGCATTCAACGTTTCAAGATTTTGGCCACTACATCAGCTGTTTGTATT
GTTCGCCCCTTGGTAACTCGAACTAAACCACAGCAGGAAGGAAACACTTT
TCGTTGAACAGCTTGGTAAAGCCAAGAACCAAGAATTAGTAGAATCAGTT
GCCGCCATACCGAACTCCCTTAATTTCATAGTACGCAACTCACTCCACGC
TGCCCTTACTCCTCTTTCATAGACCTGCACACCCTTGGACCCTCTCGTGT
ACTCACCTACCGCATCAACGCAACCATTCACACACAGGAGGCGCTTGAGC
GAGACCTTAGAAGGCTTCAGTCCGCCGGGTTGTGGGCCATTGTGCATAGC
AACGAGAGAGCGTCTTCCTCGGAATCGGAGGCTTTTGCATCGCCCTCTTC
GCTCCACGATTCCGATGGCAGGGTATCAGAGAGCGACGAAACGGATGATG
GCGAGGACGGAAGTGACCAAGTCAAGAAGCGCTGCAGTGTGGTCGTCGCC
CCAACGAAAATGTCAACAGCGGGGGGAGGCGGCTTGGTGATACCCCTCGT
GTCACCTCGTAACCAACAGAACGAGCAGGCAGCAGTTGCACGAGACAGTA
ATAACAACCAACAACAGAGGCGAACATCATCAACAACATCCATGGATGAT
GCCATTACCTCAATGGCCTTGGGAAAATTGAAAACAGCCTCTCCCACGTC
GCACCTGTCGGCGGCGGACGAGCGCTCTGTGTCCTCGAAGCTACCTCAGA
CGTCGGTGCTGTCACCATGCGACACCAGTAGAAATATGACGACACAAGGA
AACATAAGTTCGAATTCACGACAATCTAAGAGGCGGAGACAAAGGAACCG
TACACACAAATCTAATTGTAATCTTTTCGCGTTGCTTATGCAACAAGGGC
AGAATGCGACGGTCGAAGCGGATGCACTAAGGAGAGAGGTAAGGGAAGCT
CATCAAAATTCATCATTGGTTGCTGTCAGAGCGAGGAAGGAAGCTCTACA
ACTCGTACAGGTACGAACAAGACTGCTGAACAGCACTGTTGTACGCCGAA
AGTTTGGCAGGAAACACGTTTTTCTCTGCCTTGTTTTCTTCGTAGTCACC
ATGCACTCCCTCTTTTCGTCACTGAGACATATTTCGCGCGCATACTGCGC
AACAGCATTCAACCCCAGTGTGAAGCCGGTTGCACATAATTACCGCCTCA
CTCGACTCTGCCATGTAGCCCAGCAACGGCAGTAAACAAACAGGTTCCCC
CCTCCCTCTCCCTCTTGTTCTAACACTCTCTGCTCTATGCCGTTTTGTTC
GTACGCAACGTTGTTCGGCATTTCTACACTTATCTTTTGGGACAAAAGTA
GGCATGCGGCAGGGCGCAGGGCGCCGTTTTCTCCTTTTTGGCAGATCCAA
CACCCACGATGAAAGGGATATTCCCGGGACTGCTGCAGGTACGAAATGTT
GAAACAATAGCAACGTACGCTATTTCATCAGATCTGCTCATATCTACGCC
GTCGTTTATGCATTGGAGAATATTTGCAGCAGTACTGTCGGTGGTTTGGA
CGGAGTCTCGTTTTTCGGACGCTGATTCTGGTACTTCGCTGTTGACTTTT
TGCGGAAGAAAACTCGCTAACGAAATTGCAAGAGGGATATCATTGCCAGT
CGCTCCCCTACCGTTTTGGACGTAAATAGGTACTAGGAATGACCACGGTA
CCCGAGCACGTATCAATCATCAGAGCGAACCAGCCCCTCGGCGTTGCCGG
TATTCACTACACGATTACCTCGACAGTTCGCGCCCTCTTGGCGTTCCGTC
GCGAGGCCGCGATGGCTGCGACGACGCAGGCGGCGACAGCCGCACCGACA
GTGGGGAGCTTATCACGGCGCCGACTAGAAGAATTTTTGTACGAGCTAGA
GTTGAGGCGCTCGGGGACAGTGGGGGTGGCGAGGGCTGCACTTCGAAGAT
TGGTGGCATCGCTCTTGTATTGGATGCCGCTGCCGGTAGACGGTGGGAGC
GGGAGGACTTCCACAAATGGTGGTGGTGGGGTGACTCCGAGGCCGCCCGC
GTACGGAAAGCTACCAAGGACCATGGCGGGACATGAAACAACAGCCTTCA
CTCAGTTTCAGGCAAGACTGAAATGACACTAATCTAAACGTATTGTAGCA
ATACTCTGTGCTGTAACAACCATACCCTGTGCATTTTGCCGGGGCAGAAT
AATTCCGGCGTACTTGCAGCCGGAAATAGTTTCGTCGCTTCATGGTACGA
GATTTAGTGAACACGTGACCACTGCTACGGATATCAATCACGCAACCTAG
AGACAGTTTTCTTAGCCTCCGCTCCCCGCCCTGCCTCCTCCACCCCCGTC
CCTTATATTTGGAACAAATCAGGCATTATTACTCCGAACAGGAGAGATGG
CTGGCGTCGAAGGCGATGACCGGGAACGACGATCCCATCAAGATAGCAGC
AGTGCAGCAGACAACGACACTGCAAGAAACTACGGCAACCCCAGCTTTTC
CACTACCGAAGAGTGCCTCTGGCTTCGACTATTTGAAGCGGTGGAGAGTC
ATACCAGGCCATGTCGCACGGAGCCTCAGCAAGGACCAACGAAGCCCGAG
CTTGTTCCCTTAGAGACTGCCGTGTCGGCGGTGCTTACAGTTTTCGGTCA
GGACTCCGGAGCCACACCAGGTGCGGGTGCGGACGCGGCGGCGGTACGGG
CGAGGGGCGCG
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Coding sequence (CDS) from alignment at H-paniculata_contig96:32251..37011+

>mRNA_H-paniculata_contig96.17301.1 ID=mRNA_H-paniculata_contig96.17301.1|Name=mRNA_H-paniculata_contig96.17301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4044bp|location=Sequence derived from alignment at H-paniculata_contig96:32251..37011+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAACGAAAGCGGAAGAGAGAGAAGCGGCTATGGTTCGGGCACAGAT
GAGCGTGCTAATGCTAGGGTTCTACGAAATTGTTCGGCAGATGAAAACGA
AAGCGGAAGAGAGAGAAGCGGCTATGGTTCGGGCACAGATGAGCGTGCTA
ATGCTAGGGTTCTACGAAATTGTTCGGCAGGTGACCCAACACTGTGCAGA
GCGCGGGCGGCTACTGGATAGAATATGGTGCTCTCTCAACGACCTGTTCG
AGTTTGTGCTGAAGGAGATGGGGGATACTGTCGCCAGGTGACCCAACACT
GTGCAGAGCGCGGGCGGCTACTGGATAGAATATGGTGCTCTCTCAACGAC
CTGTTCGAGTTTGTGCTGAAGGAGATGGGGGATACTGTCGCCAGCTGCGA
AAACCAGTTGTTGACCATGTCCCGGGCGTTGGAGCGGGAGCGCACTGAGA
GTGAAGCTCGAGAGGCGGCGCACAAACATGAACTTCAAATGGTGGAGGAG
CTGCTAAACGGAAGCTGCGAAAACCAGTTGTTGACCATGTCCCGGGCGTT
GGAGCGGGAGCGCACTGAGAGTGAAGCTCGAGAGGCGGCGCACAAACATG
AACTTCAAATGGTGGAGGAGCTGCTAAACGGAAGATGGTCAAAGAAAGTT
CGACAGCTAAGGGAAGAAGAAGTCCAGCAGGGTAAACGCGTCGCCAATAA
CGAGCATACGATGGTCAAAGAAAGTTCGACAGCTAAGGGAAGAAGAAGTC
CAGCAGGGTAAACGCGTCGCCAATAACGAGCATACGATGAACCTTTTACG
CAATTGGCTGCCGAATTTTGAATGGTACGCCGATTCTGTCCTGGCGAAGC
TGCTACCTCCGCCTGCGATATCTGGAGAACAAAATGCGGTCGACGGTGTG
CAGATGAACCTTTTACGCAATTGGCTGCCGAATTTTGAATGGTACGCCGA
TTCTGTCCTGGCGAAGCTGCTACCTCCGCCTGCGATATCTGGAGAACAAA
ATGCGGTCGACGGTGTGCAGACCTGCACACCCTTGGACCCTCTCACCTGC
ACACCCTTGGACCCTCTCGAGGCGCTTGAGCGAGACCTTAGAAGGCTTCA
GTCCGCCGGGTTGTGGGCCATTGTGCATAGCAACGAGAGAGCGTCTTCCT
CGGAATCGGAGGCTTTTGCATCGCCCTCTTCGCTCCACGATTCCGATGGC
AGGGTATCAGAGAGCGACGAAACGGATGATGGCGAGGACGGAAGTGACCA
AGTCAAGAAGCGCTGCAGTGTGGTCGTCGCCCCAACGAAAATGTCAACAG
CGGGGGGAGGCGGCTTGGTGATACCCCTCGTGTCACCTCGTAACCAACAG
AACGAGCAGGCAGCAGTTGCACGAGACAGTAATAACAACCAACAACAGAG
GCGAACATCATCAACAACATCCATGGATGATGCCATTACCTCAATGGCCT
TGGGAAAATTGAAAACAGCCTCTCCCACGAGGCGCTTGAGCGAGACCTTA
GAAGGCTTCAGTCCGCCGGGTTGTGGGCCATTGTGCATAGCAACGAGAGA
GCGTCTTCCTCGGAATCGGAGGCTTTTGCATCGCCCTCTTCGCTCCACGA
TTCCGATGGCAGGGTATCAGAGAGCGACGAAACGGATGATGGCGAGGACG
GAAGTGACCAAGTCAAGAAGCGCTGCAGTGTGGTCGTCGCCCCAACGAAA
ATGTCAACAGCGGGGGGAGGCGGCTTGGTGATACCCCTCGTGTCACCTCG
TAACCAACAGAACGAGCAGGCAGCAGTTGCACGAGACAGTAATAACAACC
AACAACAGAGGCGAACATCATCAACAACATCCATGGATGATGCCATTACC
TCAATGGCCTTGGGAAAATTGAAAACAGCCTCTCCCACGAACCGTACACA
CAAATCTAATTGTAATCTTTTCGCGTTGCTTATGCAACAAGGGCAGAATG
CGACGGTCGAAGCGGATGCACTAAGGAGAGAGGTAAGGGAAGCTCATCAA
AATTCATCATTGGTTGCTGTCAGAGCGAGGAAGGAAGCTCTACAACTCGT
ACAGGAACCGTACACACAAATCTAATTGTAATCTTTTCGCGTTGCTTATG
CAACAAGGGCAGAATGCGACGGTCGAAGCGGATGCACTAAGGAGAGAGGT
AAGGGAAGCTCATCAAAATTCATCATTGGTTGCTGTCAGAGCGAGGAAGG
AAGCTCTACAACTCGTACAGGCATGCGGCAGGGCGCAGGGCGCCGTTTTC
TCCTTTTTGGCAGATCCAACACCCACGATGAAAGGGATATTCCCGGGACT
GCTGCAGGCATGCGGCAGGGCGCAGGGCGCCGTTTTCTCCTTTTTGGCAG
ATCCAACACCCACGATGAAAGGGATATTCCCGGGACTGCTGCAGGTACTA
GGAATGACCACGGTACCCGAGCACGTATCAATCATCAGAGCGAACCAGCC
CCTCGGCGTTGCCGGTATTCACTACACGATTACCTCGACAGTTCGCGCCC
TCTTGGCGTTCCGTCGCGAGGCCGCGATGGCTGCGACGACGCAGGCGGCG
ACAGCCGCACCGACAGTGGGGAGCTTATCACGGCGCCGACTAGAAGAATT
TTTGTACGAGCTAGAGTTGAGGCGCTCGGGGACAGTGGGGGTGGCGAGGG
CTGCACTTCGAAGATTGGTGGCATCGCTCTTGTATTGGATGCCGCTGCCG
GTAGACGGTGGGAGCGGGAGGACTTCCACAAATGGTGGTGGTGGGGTGAC
TCCGAGGCCGCCCGCGTACGGAAAGCTACCAAGGACCATGGCGGGACATG
AAACAACAGCCTTCACTCAGTACTAGGAATGACCACGGTACCCGAGCACG
TATCAATCATCAGAGCGAACCAGCCCCTCGGCGTTGCCGGTATTCACTAC
ACGATTACCTCGACAGTTCGCGCCCTCTTGGCGTTCCGTCGCGAGGCCGC
GATGGCTGCGACGACGCAGGCGGCGACAGCCGCACCGACAGTGGGGAGCT
TATCACGGCGCCGACTAGAAGAATTTTTGTACGAGCTAGAGTTGAGGCGC
TCGGGGACAGTGGGGGTGGCGAGGGCTGCACTTCGAAGATTGGTGGCATC
GCTCTTGTATTGGATGCCGCTGCCGGTAGACGGTGGGAGCGGGAGGACTT
CCACAAATGGTGGTGGTGGGGTGACTCCGAGGCCGCCCGCGTACGGAAAG
CTACCAAGGACCATGGCGGGACATGAAACAACAGCCTTCACTCACAATAC
TCTGTGCTGTAACAACCATACCCTGTGCATTTTGCCGGGGCAGAATAATT
CCGGCGTACTTGCAGCCGGAAATAGTTTCCAATACTCTGTGCTGTAACAA
CCATACCCTGTGCATTTTGCCGGGGCAGAATAATTCCGGCGTACTTGCAG
CCGGAAATAGTTTCATGGCTGGCGTCGAAGGCGATGACCGGGAACGACGA
TCCCATCAAGATAGCAGCAGTGCAGCAGACAACGACACTGCAAGAAACTA
CGGCAACCCCAGCTTTTCCACTACCGAAGAGTGCCTCTGGCTTCGACTAT
TTGAAGCGGTGGAGAGTCATACCAGGCCATGTCGCACGGAGCCTCAGCAA
GGACCAACGAAGCCCGAGCTTGTTCCCTTAGAGACTGCCGTGTCGGCGGT
GCTTACAGTTTTCGGTCAGGACTCCGGAGCCACACCAGGTGCGGGTGCGG
ACGCGGCGGCGGTACGGGCGAGGGGCGCGATGGCTGGCGTCGAAGGCGAT
GACCGGGAACGACGATCCCATCAAGATAGCAGCAGTGCAGCAGACAACGA
CACTGCAAGAAACTACGGCAACCCCAGCTTTTCCACTACCGAAGAGTGCC
TCTGGCTTCGACTATTTGAAGCGGTGGAGAGTCATACCAGGCCATGTCGC
ACGGAGCCTCAGCAAGGACCAACGAAGCCCGAGCTTGTTCCCTTAGAGAC
TGCCGTGTCGGCGGTGCTTACAGTTTTCGGTCAGGACTCCGGAGCCACAC
CAGGTGCGGGTGCGGACGCGGCGGCGGTACGGGCGAGGGGCGCG
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