prot_H-paniculata_contig9591.17297.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9591.17297.1
Unique Nameprot_H-paniculata_contig9591.17297.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length207
Homology
BLAST of mRNA_H-paniculata_contig9591.17297.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 2.420e-30
Identity = 74/209 (35.41%), Postives = 116/209 (55.50%), Query Frame = 0
Query:    2 LTGEWGGCNGCSTAKAHRFAVPKKTIKRATWASERLYVDLGGPMRVTNLASSSYVMIIVDDYSRLQAVEFIKKKSDPTAALQIYIAD---NITTKRFKIGAIRTDNGGEF-DDDFHLKLDEDGITLELTPPDTPQCNGTAKRRLGLLREKTIALK-------QHLTEGGGEKLWAEAMNYACDITNMSCTLSIEGNVTPYEKWYGTTAP 199
            L G+   C+GCS +KA R  + ++T +R+     R++VDLGG   + ++    Y MI+ DD++R   + F+K +SD   A + ++A    NI     +I  +R+DNGGEF   +F    +E  I  E TP  +PQ NG A+R LGL+ E  +A +        H+     +KLWAEAM++AC+  N +   +   +++PYE WYG   P
Sbjct:  280 LVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRP 486          
BLAST of mRNA_H-paniculata_contig9591.17297.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.830e-29
Identity = 69/207 (33.33%), Postives = 113/207 (54.59%), Query Frame = 0
Query:    2 LTGEWGGCNGCSTAKAHRFAVPKKTIKRATWASERLYVDLGGPMRVTNLASSSYVMIIVDDYSRLQAVEFIKKKSDPTAALQIYIAD-NITTKRFKIGAIRTDNGGEF-DDDFHLKLDEDGITLELTPPDTPQCNGTAKRRLGLLREKTIALK-------QHLTEGGGEKLWAEAMNYACDITNMSCTLSIEGNVTPYEKWYGTTAP 199
            L G+   C+GCS +KA R  + ++T +R+     R++ DLGG   + ++    Y +I+ DD++R   + F++ KSD  +A + ++A          +  +R+DNGG+F   DF    +E  I  E TP  +PQ NG A+R LGL+ E  +A +        H+     +KLWAEAM++AC+  N +   +   +++PYE WYG   P
Sbjct:   60 LVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRP 266          
BLAST of mRNA_H-paniculata_contig9591.17297.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 4.300e-29
Identity = 75/210 (35.71%), Postives = 113/210 (53.81%), Query Frame = 0
Query:    2 LTGEWGGCNGCSTAKAHRFAVPKKTIKRATWASERLYVDLGGPMRVTNLASSSYVMIIVDDYSRLQAVEFIKKKSDPTAALQIYIA----DNITTKRFKIGAIRTDNGGEF-DDDFHLKLDEDGITLELTPPDTPQCNGTAKRRLGLLREKTIALK-------QHLTEGGGEKLWAEAMNYACDITNMSCTLSIEGNVTPYEKWYGTTAP 199
            L GE   C GCS AKA +  + ++T  R+     R++VDLGG   V ++    Y MI+ DD++R   + F+K KSD   A + ++A    D + +    +  +R+DNGGEF   +F    +E  I  E TP  +PQ NG A+R LGL+ E  +A +        H+     +KLWAEAM++AC+  N +   +   + +PYE WYG   P
Sbjct:  692 LVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSL---VEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGEPRP 898          
BLAST of mRNA_H-paniculata_contig9591.17297.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 4.330e-29
Identity = 75/210 (35.71%), Postives = 113/210 (53.81%), Query Frame = 0
Query:    2 LTGEWGGCNGCSTAKAHRFAVPKKTIKRATWASERLYVDLGGPMRVTNLASSSYVMIIVDDYSRLQAVEFIKKKSDPTAALQIYIA----DNITTKRFKIGAIRTDNGGEF-DDDFHLKLDEDGITLELTPPDTPQCNGTAKRRLGLLREKTIALK-------QHLTEGGGEKLWAEAMNYACDITNMSCTLSIEGNVTPYEKWYGTTAP 199
            L GE   C GCS AKA +  + ++T  R+     R++VDLGG   V ++    Y MI+ DD++R   + F+K KSD   A + ++A    D + +    +  +R+DNGGEF   +F    +E  I  E TP  +PQ NG A+R LGL+ E  +A +        H+     +KLWAEAM++AC+  N +   +   + +PYE WYG   P
Sbjct:  399 LVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSL---VEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGEPRP 605          
BLAST of mRNA_H-paniculata_contig9591.17297.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 7.930e-29
Identity = 71/207 (34.30%), Postives = 113/207 (54.59%), Query Frame = 0
Query:    2 LTGEWGGCNGCSTAKAHRFAVPKKTIKRATWASERLYVDLGGPMRVTNLASSSYVMIIVDDYSRLQAVEFIKKKSDPTAALQIYIAD-NITTKRFKIGAIRTDNGGEF-DDDFHLKLDEDGITLELTPPDTPQCNGTAKRRLGLLREKTIALK-------QHLTEGGGEKLWAEAMNYACDITNMSCTLSIEGNVTPYEKWYGTTAP 199
            L G+   C+GCS +KA R  +  +T +R+     R++VDLGG   + ++    Y MI+ DD++R   + F++ KSD  +A + ++A          +  +R+DNGGEF   +F    +E  I  E TP  +PQ NG A+R LGL+ E  +A +        H+     +KLWAEAM++AC+  N +   +   +++PYE WYG   P
Sbjct:  213 LVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRP 419          
BLAST of mRNA_H-paniculata_contig9591.17297.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.900e-28
Identity = 71/207 (34.30%), Postives = 112/207 (54.11%), Query Frame = 0
Query:    2 LTGEWGGCNGCSTAKAHRFAVPKKTIKRATWASERLYVDLGGPMRVTNLASSSYVMIIVDDYSRLQAVEFIKKKSDPTAALQIYIAD-NITTKRFKIGAIRTDNGGEF-DDDFHLKLDEDGITLELTPPDTPQCNGTAKRRLGLLREKTIALK-------QHLTEGGGEKLWAEAMNYACDITNMSCTLSIEGNVTPYEKWYGTTAP 199
            L G+   C+GCS +KA R  + ++T +R+     R++VDLGG     ++    Y MI+ DD++R   + F++ KSD  +A + ++A          +  +R+DNGGEF   +F    +E  I  E TP  +PQ NG A+R LGL+ E  +A +        H+     +KLWAEAM++AC+  N +   +   ++ PYE WYG   P
Sbjct:  158 LVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGEPRP 364          
BLAST of mRNA_H-paniculata_contig9591.17297.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 5.090e-28
Identity = 73/210 (34.76%), Postives = 113/210 (53.81%), Query Frame = 0
Query:    2 LTGEWGGCNGCSTAKAHRFAVPKKTIKRATWASERLYVDLGGPMRVTNLASSSYVMIIVDDYSRLQAVEFIKKKSDPTAALQIYIA----DNITTKRFKIGAIRTDNGGEF-DDDFHLKLDEDGITLELTPPDTPQCNGTAKRRLGLLREKTIALK-------QHLTEGGGEKLWAEAMNYACDITNMSCTLSIEGNVTPYEKWYGTTAP 199
            LTG+   C+GCS  KA R A+   T   +     R++V+LGG   V ++    Y MI+ DD++R   + F++ KSD  +A + ++A    D I +    I  +R+DNGGEF   +F    +E  I  E TP  +P+ NG A+R LGL+ E  +A +        H+     ++LWAEAM++AC+  N +   +   + +PYE WYG   P
Sbjct:  419 LTGKMHACSGCSMGKAIRKAIAHVTTNSSDKKLGRVFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSL---IEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARP 625          
BLAST of mRNA_H-paniculata_contig9591.17297.1 vs. uniprot
Match: A0A1Y1LP39_PHOPY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1LP39_PHOPY)

HSP 1 Score: 120 bits (301), Expect = 6.100e-28
Identity = 80/210 (38.10%), Postives = 114/210 (54.29%), Query Frame = 0
Query:    3 TGEWGGCNGCSTAKAHRFAVPKKTIKRATWASERLYVDLGGPMRVTNLASSSYVMIIVDDYSRLQAVEFIKKKSDPTAAL---QIYIADNITTKRFKIGAIRTDNGGEF-DDDFHLKLDEDGITLELTPPDTPQCNGTAKRRLGLLREKTIALKQHLTEGGGEK-LWAEAMNYACDITNMSCTLSIEGNVTPYEKWYGTTAPLEHLQPFG 207
            +G    C  C   K HR   P+K + RAT   E L+ DL GPM V ++  + YV+ ++DDY+R+  V F+K K++    L   + YI +N T KR K  AIR+D GGE+ +        E GI  +LT   TP+ NG A+R    L EK  A+   LTE   +K  WAEA+  A    N S T+++  ++TP+E W G    L H++ FG
Sbjct:  118 SGTMEACVSCIKGKQHRLPFPQKKVHRATEVLELLHSDLCGPMNVPSIGGARYVLTLIDDYTRMTFVSFLKTKNEVFTKLSEFRTYI-ENQTGKRIK--AIRSDRGGEYVNKQLETFFSETGIHHQLTIAHTPEQNGVAERCNRTLIEKARAM---LTEANLDKSYWAEAVCTANYCKNRSPTIAVS-HMTPFEAWTGEKPDLSHMRTFG 320          
BLAST of mRNA_H-paniculata_contig9591.17297.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.200e-27
Identity = 73/217 (33.64%), Postives = 117/217 (53.92%), Query Frame = 0
Query:    2 LTGEWGGCNGCSTAKAHRFAVPKKTIKRATWASERLYVDLGGPMRVTNLASSSYVMIIVDDYSRLQAVEFIKKKSDPTAALQIYIA----DNITTKRFKIGAIRTDNGGEF-DDDFHLKLDEDGITLELTPPDTPQCNGTAKRRLGLLREKTIALK-------QHLTEGGGEKLWAEAMNYACDITNMSCTLSIEGNVTPYEKWYGTTAPLEHLQPF 206
            LTG+   C GCS +KA +  +  +T  R+     R++VDLGG   V ++    Y MI+ DD++R   + F+K KSD  +A + ++A    D I +    +  +R+DNGGEF   +F    +E  I  E TP  +PQ NG A+R LGL+    +A +        H+     ++LWAEAM++AC+  N +   +   + +PYE W+G  +   H +P+
Sbjct:  598 LTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSL---VEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEAS---HARPY 808          
BLAST of mRNA_H-paniculata_contig9591.17297.1 vs. uniprot
Match: B1PJ47_PHATR (Gag-pol polyprotein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B1PJ47_PHATR)

HSP 1 Score: 119 bits (299), Expect = 1.300e-27
Identity = 70/179 (39.11%), Postives = 101/179 (56.42%), Query Frame = 0
Query:    2 LTGEWGGCNGCSTAKAHRFAVPKKTIKRATWASERLYVDLGGPMRVTNLASSSYVMIIVDDYSRLQAVEFIKKKSDPTAALQIYIADNITTKRFKIGAIRTDNGGEFDDDFHLKLDEDGITLELTPPDTPQCNGTAKRRLGLLREKTIALKQ--HLTEGGGEKLWAEAMNYACDITNMS 178
            +TGE   C GC  AKA + +V K T  RA    ERL+VD+ GP   T L S  Y + +VDD +R   + F+KK+SD +  L+  +   +   + +   +R DN GE  +      D+ G+TLELT PDTPQ NG  +RR+ +L+++  A+     LT      LWAEA+N A D+ N+S
Sbjct:  595 VTGELQSCEGCCLAKAKQKSVSKTTNIRAKSPGERLFVDMSGPFTATILGSR-YQIQVVDDATRKGFIGFVKKRSDLSQWLEENVLSKLEGMQKQTKYLRADNAGENKNPLEKLCDKKGMTLELTAPDTPQQNGVVERRIAVLQQRANAMMMAADLTPEARALLWAEALNTANDLENIS 772          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9591.17297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV76_9PHAE2.420e-3035.41Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KVR5_9PHAE1.830e-2933.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JBA7_9PHAE4.300e-2935.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE4.330e-2935.71Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRL9_9PHAE7.930e-2934.30Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5L3Y0_9PHAE1.900e-2834.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JH25_9PHAE5.090e-2834.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y1LP39_PHOPY6.100e-2838.10Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5K2M6_9PHAE1.200e-2733.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B1PJ47_PHATR1.300e-2739.11Gag-pol polyprotein n=1 Tax=Phaeodactylum tricornu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 35..146
e-value: 3.0E-11
score: 43.6
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 19..197
score: 18.646
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 23..205
e-value: 3.7E-19
score: 70.7
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..199
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 9..199
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 35..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9591contigH-paniculata_contig9591:8846..9466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9591.17297.1mRNA_H-paniculata_contig9591.17297.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9591 8846..9466 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9591.17297.1 ID=prot_H-paniculata_contig9591.17297.1|Name=mRNA_H-paniculata_contig9591.17297.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp
MLTGEWGGCNGCSTAKAHRFAVPKKTIKRATWASERLYVDLGGPMRVTNL
ASSSYVMIIVDDYSRLQAVEFIKKKSDPTAALQIYIADNITTKRFKIGAI
RTDNGGEFDDDFHLKLDEDGITLELTPPDTPQCNGTAKRRLGLLREKTIA
LKQHLTEGGGEKLWAEAMNYACDITNMSCTLSIEGNVTPYEKWYGTTAPL
EHLQPFG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf