prot_H-paniculata_contig959.17295.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig959.17295.1
Unique Nameprot_H-paniculata_contig959.17295.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length925
Homology
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BLAST of mRNA_H-paniculata_contig959.17295.1 vs. uniprot
Match: D7FI25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI25_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 1.510e-21
Identity = 66/144 (45.83%), Postives = 83/144 (57.64%), Query Frame = 0 
Query:  803 AAAAAAANVQHKTFSLPRKLALRFTPRDHYTEEKVAQRGYNPAQQLKAPLYKLVDAVFKFMAKKWSEVAYGDLNNVRIVFEA-----GIPAFG----------------FVSDAYVWGASRSNESLIDLVNSLPEATRIRACTE 925
            A AA A   +     LPRK++LRF+PRD  TE KV++RGY P Q+L APL K ++AVFKFM KKWSEVAY DLN++RI+F+A     G+PA                        VWGA  S   L+DLV++LP     R C E
Sbjct:  723 AVAAEAVRGRSSPRQLPRKVSLRFSPRDESTESKVSERGYLPFQKLTAPLSKPLEAVFKFMVKKWSEVAYSDLNSIRIIFDADAGDTGVPASSAXXXXXXXXXXXXXXXXADRTVVWGAELSKRPLLDLVSALPGPALDRVCEE 866
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BLAST of mRNA_H-paniculata_contig959.17295.1 vs. uniprot
Match: A0A6H5JFG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG9_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 7.170e-21
Identity = 62/126 (49.21%), Postives = 78/126 (61.90%), Query Frame = 0 
Query:  818 LPRKLALRFTPRDHYTEEKVAQRGYNPAQQLKAPLYKLVDAVFKFMAKKWSEVAYGDLNNVRIVFEA-----GIPAFGFVSDAY-------------VWGASRSNESLIDLVNSLPEATRIRACTE 925
            LPRK++LRF+PRD  TE KV++ GY P Q+L APL K ++AVFKFM KKWSEVAY DLN++RIVF+A     G+P     + A              VWGA  S   L+DLV++LP     R C E
Sbjct:  698 LPRKVSLRFSPRDESTEGKVSEHGYLPFQKLTAPLSKPLEAVFKFMVKKWSEVAYSDLNSIRIVFDADAGDTGVPTAAASTPALSQPXXXXXADRTVVWGAELSKRPLLDLVSALPGPALDRVCEE 823
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig959.17295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI25_ECTSI1.510e-2145.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFG9_9PHAE7.170e-2149.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig959contigH-paniculata_contig959:9825..23442 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig959.17295.1mRNA_H-paniculata_contig959.17295.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig959 9248..23442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig959.17295.1 ID=prot_H-paniculata_contig959.17295.1|Name=mRNA_H-paniculata_contig959.17295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=925bp
MADIGGDESSLMMGAFDPSAFNGRDEDLILPGDSLFGFSAAAGIGASETG
DDSSSASFQKPSSLCSPPMPFQATATLAPSAPNNSNAGPRGTPIKSTGST
DRDSSARGEGLGEGTAHGCGKRPSLLQVVDAAVGRINRNSGAVAAVVNGS
RKRRTRNGTGSSSSNSKVAKGKTKSSLLSSSASSSCVLGTGTGPRPFEYV
ASSSSNDESDGRKGSSIADGTEIETIPDAATFRGDSSSDRPMRKAVTPIQ
RREKDSKKPKTRKMVATADDEDAIESITQTTSKRKGESLTVVGGDSSAKE
SKSGAGGPAEVAAVRGVAESVAKQRSKPKRSTRRKDGGTEGGISALGRDG
KVKGGAVAAVAAIESPEVSMPAGMELIPGFEDTIDAHFVKTLLQGSETQA
AAPFVDMEEGRGMDGPSPSDEGVNEDDDATSISIGMGDDDEPGAVTTTES
LRTACGMPEEEATQKDETLAPAPVMQPPSPTAATALPSASYPQRPLTSRE
PSAAVSRTLQATPPDGIKSHPRTGSTPTVDEPRAGNKRKLNNGEDREDRP
RALAPAMPRPPVLPVAPTLEGKLASDAYSATSGRLTQDRHRGDEGVKQMA
ETATAGSMPGRNQGPKAAAVLGKPLNLTSSPHGGGQETVRLPGKLVNATP
SLANVSRARTPQPSTGLVACAAEGPSVLPSVSSAGSVNPAYDANADGRQL
EGTSRITGGAVAGTGNAVVAPSTVPATCSVGASPVPASRPNGQGIFTVRS
AACAAIPRVKVATVDVTGPGVGSLPVQVGTQNGFREAEAIVARTSSECVG
STAAAAAAANVQHKTFSLPRKLALRFTPRDHYTEEKVAQRGYNPAQQLKA
PLYKLVDAVFKFMAKKWSEVAYGDLNNVRIVFEAGIPAFGFVSDAYVWGA
SRSNESLIDLVNSLPEATRIRACTE
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