Homology
BLAST of mRNA_H-paniculata_contig9589.17292.1 vs. uniprot
Match:
D7G6Z4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z4_ECTSI)
HSP 1 Score: 234 bits (596), Expect = 8.930e-63
Identity = 226/641 (35.26%), Postives = 331/641 (51.64%), Query Frame = 1
Query: 535 TGLSARKEQVEKEIMEQKALIEKLEGRMASLSSRGRAGEREINKIPHAAVEDESPDIGESRQAANNICRPRSTPGSLQQPCGEEKDLE---TKREKTLKQARSREEDIRADTAHHQGRSVQSTTAKQTTTCRSVVRREQQETDS-ATAIQRNTESDDQHRKFLSLRSAREELERNLSSISSLAESLVVENGGEIPKCDSSLPGRNKNA-VERVGSAEGAPMALVARLLETSREDDLTRPPFEPLRSMYHQFGILEDTLS---LLVTAVNDSG-------NAKDNAPSACRSLTEYFAATRIALDRIKDALGVGDDEL-QTVRRSPAVSAASPIAS-PHRL-PAGSGRAVAVAAASGKGGILVSPDQVEPSPRPAVS-------NALRFRNGS-------PAQSAGERGRMKLSSLSVEAIGRLLRANGFRDDAAGFVSQAVDGAMLNDPNLCEEDFRELGLGETSTSDGATGHGTSITRLLAFFKACQKDGVMEPTGGVDYSDTG--FSTGSEQARLGEKNSSNTNGRCDGATGPGVEPGGPLQEAAQVNSAAIAESDSSGGDLWRRSSIELDRENQTIIANIPLDQFDETE-DQISTSHVERIANGRRISVRRNNGIVVTAGGLQPALVRDVDGLDTVDA 2352
+GL+ RKEQV+KEI+ QK LIEKLEGR+ASLS RG G R + A ++ES R + RP +T + +QP GEE D + + R K Q+R + + + A H + + + + + R QQ T+ A IQRN + ++FL+L++AREELE +L ++ S A + + + P + A V+ G A+ +A RLLETSRED L +PPFE LR+MY G+ E TL+ L ++G NA+ + + E A + ALD I++A+G + +T + +A+SP A H+ PAGSGRA A+A S +GG+LVS D+ + +++ N R R GS PAQS + L SL VE + +LLR +GF + GFV+QAVDG ML+DPNLCE D ELGLG + A G S R+++FF+ CQ++GV+ P G G ++ G+ + R D AT E GG E + + ++S+ WRR S+ +DRENQ +IA I LD D D + + E GRR+SV+ N G+V+TAGG + V ++ L ++A
Sbjct: 16 SGLAERKEQVQKEILAQKELIEKLEGRVASLSGRG--GHRAAPRGSSAPPQEESERGTTGRHDIED--RPATTTDA-KQPHGEEGDHDLDGSARAKANSQSRGKGKSCCQEVADHGPNARRDSLRRSSQGESQAGYRGQQRTEQCAVEIQRNVRGASRRKRFLTLQAAREELEHHLQALVSAAATALAHRQHQ----QDQQPNDGRGAEVDSEGKAKNVSIAA-ERLLETSREDGLAKPPFEILRAMY--CGLSEVTLAVECLSAAEEEEAGGVSGRGRNARISGLPCAATTAESCDAAKEALDAIREAVGADTTVIGETAHSTVQATASSPNAPRDHQYSPAGSGRAAAIAMTSARGGLLVSVDEPPTTDGESLAGKEHREVNDARNRGGSVDPGDTRPAQS------VPLRSLDVERVAQLLRLHGFEEHVPGFVAQAVDGVMLSDPNLCEADLAELGLGGRA----AEGAQDSRARMVSFFRKCQRNGVVFPVAGGSSPSFGGKVEPRTDSVHNGDSTPDDRR-RNDSATLRKKEMGG--LEGSVPGESKTDRTESTQDSPWRRGSVLVDRENQRVIAQISLDSSDTGRGDATAFTGTE---GGRRMSVKLNQGVVITAGGREAGSVENMYELPAINA 628
BLAST of mRNA_H-paniculata_contig9589.17292.1 vs. uniprot
Match:
A0A6H5KQJ7_9PHAE (SAM domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQJ7_9PHAE)
HSP 1 Score: 198 bits (504), Expect = 4.300e-51
Identity = 167/497 (33.60%), Postives = 252/497 (50.70%), Query Frame = 1
Query: 940 QQETDSATAIQRNTESDDQHRKFLSLRSAREELERNLSSISSLAESLVVENGGEIPKCDSSLPGRNKNA-VERVGSAEGAPMALVARLLETSREDDLTRPPFEPLRSMYHQFGILEDTLSLLVTAVNDSG----------NAKDNAPSACRSLTEYFAATRIALDRIKDALGVGDDELQTVRRSPAVSAASPIASPH---RLPAGSGRAVAVAAASGKGGILVSPDQVEPSPRPAVSNALRFRNGSPAQSAGER---------GRMKLSSLSVEAIGRLLRANGFRDDAAGFVSQAVDGAMLNDPNLCEEDFRELGLGETSTSDGATGHGTSITRLLAFFKACQKDGVMEPTGGVDYSDTG--FSTGSEQARLGEKNSSNTNGRCDGATGPGVEPGGPLQEAAQVNSAAIAESDSSGGDLWRRSSIELDRENQTIIANIPLDQFDETE-DQISTSHVERIANGRRISVRRNNGIVVTAGGLQPALVRDVDGLDTVDA 2352
Q+E A AIQRN ++FL+L++AREELER+L +++S A P + A V+ G A+ +A RLLETSRED L +PPF+ LR++Y + E TL++ + + G NA+ + ++ E A + ALD I++A+G G + + + + AS +P PAGSGRA A+A S +GG+LVS D+ P+ R G+ A++ GE + L SL VE + +LLR +GF + A GFV+QAVDG ML+DPNLC++D ELGLG + S R+++FF+ CQ+ GV+ P G G ++ G+ S + R + AT E GG E + + ++S+ WRR S+ +DRENQ +IA I LD D + + E GRR+SV+ N G+V+TAGG + V +++ L ++A
Sbjct: 85 QREEQCAVAIQRNVRGTSGRKRFLTLQAAREELERSLQALASAAXXXXXXXXXXXXX----QPNDGRGAEVDSEGKAKNVSIAA-ERLLETSREDGLAKPPFKILRAIY--CSLSEATLAVACLSAAEEGEVGRVVGGSRNARISGLPCAATMAESCDAAKEALDAIREAVGAGTTVIGEMAHTTVHATASSPNAPRDHQHSPAGSGRAAAIAMTSARGGLLVSADE-PPTTHGESLAGQEHREGNDARNRGESVDPGDKRPAQPVPLRSLDVERVAKLLRLHGFEEYAPGFVAQAVDGVMLSDPNLCQDDLTELGLGGGAAERAQD----SRARMVSFFRQCQRHGVVFPVAGGSSPSFGGKIEPRTDSVHNGDSTSDDRR-RNESATLRKKEMGG--LEGSVPGESKTDRTESTQDSPWRRGSVLVDRENQRVIAQISLDSGGTGRGDATAFTGTE---GGRRMSVKLNQGVVITAGGREAGSVENMNELPAINA 563
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9589.17292.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 8.93e-63 / Id = 35.26 Expect = 4.30e-51 / Id = 33.60 Sequence D7G6Z4_ECTSI A0A6H5KQJ7_9PHAE
Match Name E-value Identity Description
D7G6Z4_ECTSI 8.930e-63 35.26 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] A0A6H5KQJ7_9PHAE 4.300e-51 33.60 SAM domain-containing protein (Fragment) n=1 Tax=E... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Hectar predicted targeting category other localisation Ec32 ortholog description hypothetical protein Ec32 ortholog Ec-01_011670.1 Exons 2 Model size 2353 Cds size 2352 Stop 0 Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9589.17292.1
>prot_H-paniculata_contig9589.17292.1 ID=prot_H-paniculata_contig9589.17292.1|Name=mRNA_H-paniculata_contig9589.17292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=784bp
INRSLRGRVFDNITDCITSSNQPITSIDVNLPPTPCSSSDREPQQSGRDS back to top mRNA from alignment at H-paniculata_contig9589:1219..4612+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9589.17292.1 ID=mRNA_H-paniculata_contig9589.17292.1|Name=mRNA_H-paniculata_contig9589.17292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3394bp|location=Sequence derived from alignment at H-paniculata_contig9589:1219..4612+ (Halopteris paniculata Hal_grac_a_UBK monoicous)ATCAACCGTAGCCTTCGCGGGAGAGTATTTGATAATATAACCGATTGTAT
CACTAGTAGTAATCAACCTATTACAAGTATCGACGTTAATCTTCCGCCGA
CCCCTTGTAGCAGCAGCGACCGCGAGCCTCAACAATCTGGTCGCGACAGT
CTTGTTGATCCCGTCGCCCTCCTCACTCGCCCGGTTGAAGGTTTTCACTA
CCCACGACAGCATTTGTTTACAGACCGCTTGGTGGGACGATTTTTCGAGG
ACGGCTCCCTCGACGCCGAGACCCGCAAAATTAGCAAGTGCCTCGCCGGA
CGGCTTGGCACCGCGAGGACCGGAGGCAGCAGCACTCGACCTGGTGCAGC
TACGAGTGTTGCGGCGCTATCACATAGCCAGCCTTACTCGCACAATATCC
CGTTAGAAGACACCTTCGGCGGCACTGGGCACGCCAAACGGATACACGGA
GGCTCTTCTGCTTCATCGCTGGGCAACAGAGGCAACTGCGGATCTAAAGG
GCAGAGAGCAACTAGGCCACAAAAGGCGGGTTGCACTGGTTTGTCGGCAA
GAAAAGAGCAAGTTGAGAAGGAAATTATGGAACAGAAAGCGTTAATCGAA
AAGCTGGAGGGGCGGATGGCATCTCTCTCTTCACGGGGACGGGCTGGAGA
GCGCGAAATCAACAAGATACCCCACGCAGCTGTCGAGGACGAGTCCCCTG
ATATCGGGGAGTCTAGGCAGGCTGCCAACAACATATGTCGACCACGATCT
ACACCAGGGTCGTTGCAGCAGCCGTGTGGAGAGGAAAAGGACCTCGAAAC
TAAGCGAGAGAAGACCTTGAAG GTGGAGAGAAAAACAAGAGTATTACAGT
ACTATAGATCGATTGGTCTCTTGTGTCGAAGTTATTAAATAGTTGTAAAC
CTAGATCTTACCACATTTTTAGTGCCACAATACTAGAATGCCTATAATGC
GAGACACGGTACTTCAGCCATGACAAAAAGATACATAGTGTAAAGGACGG
AGATTTTGAAAAATCCTCCCGTGTCTTGGATTTTCAATACATATCTAGGT
CATTCGAAGTCGATCACTCCAAATTCGATTAGGTAGTGGAGGTTGGGTAT
CCATTGCACACCGAGCACCCGGAAATAATTTGTGCGTCATACGACGGTTC
GACGAGTTAAAAGGAGCTCGTTATGAAAAATCGAAACATGCGAGATCAGG
TAGGTGGAAATGAGAGATGTAGTCATATCGATGATATCTCCGAGGAAAAC
AACCTAAGCAAGCACCTGAGTTTATTTTTCGGCAAGACTGCTCTACGCAA
ATGCCGAGCTACAAATCCCCTTCCCAAAATGTATTTGCCGAAGACTTCGA
GATAAACGAGAAAGGTAACAATCCATCCGGAAGTACCATTTTGTTGTATA
ATTTCTGCCCTTCAAGACTGAGATATTTCTCTTCCCCCAACACCAAGGGT
AGCAATCCACTTGGGAGCACCGTTTTGTCTTTCAATTTTGTTTTCCCCCT
AATACTGGGAGAGATCCCCCCTAAATTTTGTTCAGGTCGTGGATGAGTAA
CCCAGCAGCTTAAGATGTTGAGCATACCTCCGTTTTGCTTCACGACTGTT
GTCTTGTTTTCTACAGTACAGTAAGTTGTGCATCCCTCCTTGTAATTTTG
AATTGCTGTTTACTCTCCCCATCCCCCAACACATCCACATTCATTATACT
CTCGAGGAGTTGCGCATTTGTTTGCAACACCGTCGCAGACACAGTGTGCG
GAGCACTCGAAACCGCGTCCATATCTCCCTAAATTACCAGCGTAATGGCG
AAACTATTTCCAACATCGCCTGTGTTGAATTATGTTCCAGATTCAGTCGT
CCATCCGACAGCAGCAAGCTCGTAGCCGTGAAGAGGACATACGAGCCGAC
ACTGCACATCATCAAGGCCGATCAGTGCAGAGTACGACCGCTAAGCAGAC
CACAACGTGCAGAAGCGTCGTTCGCCGAGAGCAACAGGAAACTGACAGTG
CAACAGCGATCCAGCGTAACACGGAAAGTGACGACCAACATCGAAAATTC
CTATCGCTACGATCGGCCCGCGAAGAGCTAGAGCGCAATCTCAGCTCCAT
CTCGTCTTTGGCCGAATCGCTCGTTGTTGAGAATGGCGGGGAAATTCCGA
AATGCGATTCATCCTTGCCGGGCAGAAACAAAAATGCTGTCGAGAGAGTA
GGCAGTGCTGAAGGCGCGCCAATGGCTCTGGTGGCGAGGTTATTGGAGAC
CAGCCGAGAGGACGACCTCACCAGACCCCCATTTGAACCCCTTCGATCGA
TGTACCATCAATTTGGAATTCTCGAGGATACCTTATCGCTGCTTGTGACG
GCAGTCAATGACTCAGGAAATGCCAAAGACAACGCTCCGTCAGCGTGTAG
ATCCCTTACGGAATATTTCGCAGCAACGAGGATCGCCCTGGATAGAATAA
AGGATGCCTTGGGCGTCGGAGATGACGAACTACAAACAGTAAGACGTTCT
CCGGCCGTGTCGGCTGCTTCTCCAATTGCCAGCCCGCATCGATTGCCAGC
GGGCAGCGGGAGGGCGGTGGCGGTAGCCGCGGCTTCTGGAAAGGGAGGAA
TACTCGTTTCTCCTGACCAAGTGGAACCCAGCCCACGACCAGCTGTGTCA
AACGCACTCCGCTTTCGAAATGGATCACCTGCACAGAGCGCCGGGGAAAG
GGGTCGCATGAAGTTGAGCTCGCTTAGCGTTGAGGCTATAGGCCGATTGT
TGCGGGCGAATGGGTTTCGAGACGACGCTGCGGGGTTTGTGTCTCAGGCT
GTCGATGGGGCAATGCTGAACGATCCGAACCTCTGCGAGGAGGACTTCCG
GGAACTGGGATTGGGTGAGACTAGCACGTCAGATGGCGCGACTGGCCACG
GGACCTCAATAACCCGGCTGCTAGCCTTTTTCAAAGCTTGCCAAAAAGAT
GGAGTTATGGAGCCGACCGGCGGGGTAGATTACAGCGATACGGGATTTAG
TACAGGGTCGGAGCAGGCACGACTGGGAGAAAAAAACAGCAGCAATACGA
ATGGTAGGTGTGATGGAGCGACCGGACCCGGGGTTGAGCCAGGGGGACCG
CTACAGGAGGCAGCACAAGTGAATAGTGCAGCCATCGCAGAGAGCGATTC
TTCCGGTGGAGATTTATGGCGTCGAAGTTCGATCGAACTCGACCGTGAAA
ATCAAACGATAATAGCGAATATCCCCCTCGACCAGTTCGACGAGACGGAG
GACCAGATCTCGACGTCTCATGTAGAAAGGATAGCCAACGGGAGACGCAT
CTCGGTGAGGCGTAACAATGGGATTGTGGTCACGGCGGGTGGTCTCCAGC
CGGCGCTAGTTAGAGACGTTGATGGTTTAGACACCGTCGACGCC back to top Coding sequence (CDS) from alignment at H-paniculata_contig9589:1219..4612+
>mRNA_H-paniculata_contig9589.17292.1 ID=mRNA_H-paniculata_contig9589.17292.1|Name=mRNA_H-paniculata_contig9589.17292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4704bp|location=Sequence derived from alignment at H-paniculata_contig9589:1219..4612+ (Halopteris paniculata Hal_grac_a_UBK monoicous) back to top