mRNA_H-paniculata_contig9574.17284.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9574.17284.1
Unique NamemRNA_H-paniculata_contig9574.17284.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU)

HSP 1 Score: 261 bits (666), Expect = 3.480e-69
Identity = 151/372 (40.59%), Postives = 220/372 (59.14%), Query Frame = 2
Query: 1013 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVG-HRENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVL--GNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITFGG 2119
            P +  EA   PE E WRAA+EEE + L DN  +E+     +P+G K I +K + + K  ++G +  YK+R+VA+GF+Q  G  + +  APVA +  +R +  LAA +D EL+  D+  AYLN  ++EEL++ +PP+    + +     RL++SL GLKQ+GR WN TLD  L G+G NR  +++CLY  RDD G+   LV VYVDDL++    R  +D++K  ++ +F+M  +G  S +LG  +RRDRP   I +SQ  YI  VL RYG  +C+   TP+   VK SA    D+P +  +L S+   G S  Y  ++GS+MYA  GTRPD+AY V    R   +P R  +   KR  RYL    D+ + F G
Sbjct:  983 PSTLREAFSTPEGEHWRAALEEELQNLRDNCVYETVP---IPSGVKPITSKPVLRVKFDKNGGIERYKIRIVARGFTQKPGIDYQDVFAPVANLESVRIILALAARYDLELDQMDVSAAYLNGELDEELYL-MPPD--GVAIEPGHCWRLKRSLYGLKQAGRTWNKTLDRKLTGLGFNRLDSETCLYVFRDDKGQLCFLV-VYVDDLLLAATSRAFMDEVKRKLTAQFKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVKPSA----DDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGTRPDIAYLVGVLGRYSANPKRCHWEMAKRGLRYLKATRDMELRFDG 1343          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT)

HSP 1 Score: 243 bits (621), Expect = 2.010e-66
Identity = 140/373 (37.53%), Postives = 216/373 (57.91%), Query Frame = 2
Query: 1004 KGEPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHREN-VDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITFGG 2119
            K EP++  EAL  P+  KW  AME+E E+L  N  W   +   LP  RKA+ +KW+F+ K   DG+V  +K RLVAQGFSQ  G+ + ET +PVAR   +R+V  LAA+H  +L   D+  A+LN  ++EE+++K P        +   V RLR+S+CGLKQS R WN+ LD  L  +G  ++T D C+Y  +++GGE   ++AVYVDD+++ G  +  ++++K  ++++F+M+ +G     LG +V +   +  I I Q +Y + VL+R+G    +   TPV    K+   ++ D+    + +         Y+  VG L+Y ST TRPD+AY V   AR    P  E +   KRI RYL+   D+G+ + G
Sbjct:  127 KNEPRTVKEALSSPQKTKWVKAMEKEMESLKTNEVWNLVE---LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKE-HLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLK--KAADDSQRVDQV--------NYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDG 483          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA)

HSP 1 Score: 252 bits (643), Expect = 2.360e-66
Identity = 141/369 (38.21%), Postives = 215/369 (58.27%), Query Frame = 2
Query: 1013 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPF-VRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHREN-VDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113
            P++  EAL+G  A+ W+ +M  E+ AL+ N TW   D   LPAG K I +KW+F+ K  ++G +  +K RLVA+G  Q  G  ++ET +PV R   IR +F +AAE    +   D+  AYLN+ ++EE++++ P      S + P  V +L+K++ GLKQSGR WNNTLD+ L  +G  RS  ++CLY  +   G +   +AVYVDDL+I+   EN +  +K  IS +F M   GSLS  LG E++RD   G +++ Q +YIR +LK YG   CR V TP++    +   + +           V  N T+Y+ ++GSLMY +  +RPD+ + V + ++R  +P+ E     K I RYLS   +L I +
Sbjct:  818 PQTVTEALQGEYAQNWQESMRSEYNALLSNDTWSLVD---LPAGAKTIGSKWVFRIKRDKNGEIERFKSRLVAKGCGQQFGVNYWETFSPVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNF--ISTEHPNKVLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSS--YIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDS----------CVKVNVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVY 1169          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 242 bits (618), Expect = 7.080e-66
Identity = 136/370 (36.76%), Postives = 215/370 (58.11%), Query Frame = 2
Query: 1010 EPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHR-ENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVK-ISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113
            EP + +EAL GP AE+W  AM++E ++L ++  WE  +   LP  RKA+  KW+FK K   DGS+  +K RLVAQGFSQ  G  + ET +PV R   IR+V  L+ +   +L   D+  A+LN  +E+E+++K P        +     +L KSL GLKQS R WN+ LD+ L  IG  ++ +D C+Y   +DG     +VA++VDD+++ G   E +  +K +I++RF+++ +G L  +LG +V ++  +  + I Q +Y   ++K+YG   C+ V TPV+   K +SA E ++           L N  E++  VGSL+Y S+ TRPD+ + V+  A+   +P  E +   KRIFRYL    + G+ +
Sbjct:  145 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSE-----------LFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLY 495          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A067T5Q4_GALM3 (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T5Q4_GALM3)

HSP 1 Score: 250 bits (638), Expect = 8.410e-66
Identity = 145/371 (39.08%), Postives = 210/371 (56.60%), Query Frame = 2
Query: 1013 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHR-ENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNS-LGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITFGG 2119
            P+S  EA   PE E W  A+ EE+  L    TWE +D   LP  RKAI  +W+F RK  E+G +  YK RLVAQGFSQ+ G  F  T APV R   +R++  +AA  + E++  D+  AYLN  + EE+F++ P     F      V RL+K+L GLKQSGR WN  LD  L  +  ++S  D C+Y  R + G T+  + V+VDDL+I   + + ++++K  + + F +  +G    ++G EV+RDR   TI++ Q SY+  +LK+YG   CR V TP++  V ++     D   EP       LG    Y   VGSLMYA+ GTRPD+AY V + ++   +P    +   KR+FRYL+   D  + +GG
Sbjct:  728 PQSINEAKASPEWEHWEKAINEEYSLLEGMETWELDD---LPPERKAIGCRWVFLRKYNENGEIIRYKARLVAQGFSQIPGMDFDGTFAPVMRHDSLRALLAIAAIKNLEIQQLDVKGAYLNGDLREEIFMRQP---DGFHDGTSKVCRLKKTLYGLKQSGREWNRKLDKVLTELRFSKSNVDHCVYI-RTENGHTSY-ITVWVDDLMIFTDKSDEMNEIKAYLKKEFEISDLGEPKLIIGLEVKRDRKKHTISLGQTSYVDRILKKYGMENCRPVSTPMDPNVVLTRVNENDVKDEPREDRDERLGG--RYAAAVGSLMYAAIGTRPDIAYAVQKLSKYSSNPGNSHWTALKRVFRYLAGTRDRVLFYGG 1088          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: W8AQS8_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8AQS8_CERCA)

HSP 1 Score: 236 bits (603), Expect = 1.840e-65
Identity = 136/368 (36.96%), Postives = 205/368 (55.71%), Query Frame = 2
Query: 1013 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIV-GHRENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113
            P+   EAL    A+ W  AM+ E+EAL+ N TWE  +   LP G+K +R KWIF  K  +DG+V  +K RLVA+G SQV G  + ET +PV R + IR +F LAAE+   L   D+  AYLN+ + E++++   PE+        +  +L+K+L GLKQSGR WN  LD  L  IG  +  ++ C+Y       +   ++AVYVDDL+I      N++++KH ISQ  ++   G +   L  E+ RD   G I ISQ  +IR++L+ Y    CR +  P++   +I+  E T   ++             Y+ ++GSLMY +  TRPD+ ++V + A+R  DP+ E     KR+ RYL T  D  + +
Sbjct:    9 PEIVDEALSNEFADNWYEAMKVEYEALLKNKTWELAE---LPKGQKRVRNKWIFAIKRNKDGNVERFKARLVAKGCSQVYGVNYTETFSPVVRYNTIRMIFALAAEYGLHLHQMDVSTAYLNSELVEDIYM-CQPEMFVDQRFPDYCLKLKKALYGLKQSGRQWNIKLDTILKRIGFKQCESEPCVYVKHKV--KQMSIIAVYVDDLLIACSDYNNMNNIKHMISQEVQVVDKGPVQHFLSMEIERDGETGAIAISQQGHIRKLLREYNMENCRPIGIPLDPGHQINCDEKTCKKAD----------QVRYQSLIGSLMYLAVCTRPDILHSVCKLAQRNNDPHMEHLAAAKRVLRYLCTTKDKQLRY 360          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME)

HSP 1 Score: 243 bits (619), Expect = 2.500e-65
Identity = 137/369 (37.13%), Postives = 214/369 (57.99%), Query Frame = 2
Query: 1010 EPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGH-RENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113
            +P +  EAL  PEA+ W+ AM+EE E+   N TW      +LP G++AI TKW+FK K   +G++  YK RLV +G SQ +G  + ET +PV R + +R +F +AA+HD  +   D   A+LN  ++EE+F+K P   S  S     V RL KSL GLKQ+ + WN+ L++ L+ +GL RS  D C+YF   +   + + VA+YVDD+++  + ++    +K+ +S + +M+ +GS S VLG  V+RD     I + Q  YI  VLKR+G ++C  V TP++   K++      +  E   +  V      Y   VGSL+YA+  TRPD+++ V+  +R  ++P +  +   KR+ RYL    + GI F
Sbjct:  232 DPVNLEEALNSPEADDWKRAMKEEIESHKTNRTWVLT---KLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDNS---GRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSE--YSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKV-----PYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGKGHWLALKRVMRYLKGTVNKGIVF 587          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: B6V6Z8_DROME (Polyprotein n=1 Tax=Drosophila melanogaster TaxID=7227 RepID=B6V6Z8_DROME)

HSP 1 Score: 248 bits (632), Expect = 6.050e-65
Identity = 137/372 (36.83%), Postives = 217/372 (58.33%), Query Frame = 2
Query: 1013 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPP----ELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHREN-VDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113
            P+   +AL+G  A+ W+ +M++E++ALV N TW   D   LP G+KAI +KW+F+ K  ++G++  +K RLVAQG  Q  G  + ET +PV R   IR +F +AAE    +   D+  AYLN  ++EE++++ P     E  P       V +L+K++ GLKQSGR WN+TLD+ L  IG  RS  ++CLY  +    + +  +AVYVDDL+I+ + EN +  +K  I+ +F +   G L+  LG E++R+   G+I++ Q  +I  +L +YG   CR   TP++   K+             +   V  N T+++ ++GSLMY +  +RPD+ +TV + ++R  DP+ ED    K + RYLS   DL IT+
Sbjct:  809 PQCVGDALRGEHAQDWKTSMQKEYDALVSNNTWTLCD---LPPGQKAIGSKWVFRVKRDKEGNIQKFKSRLVAQGCGQKMGVNYSETFSPVIRYETIRMLFAIAAEKQLCMHQVDISNAYLNGRLQEEVYMRQPQNFIDEKHPNK-----VLKLQKAIYGLKQSGRVWNDTLDEVLKSIGFKRSKNEACLYAKQQQ--QQHSYIAVYVDDLIIISYDENEISAIKRKIANKFDIHDGGQLNYFLGMEIQRESTRGSISLCQKQFIINLLDKYGMQNCRPAATPLDPGYKMGC----------RNENCVKVNITQFQSLIGSLMYLAVLSRPDILHTVSKLSQRNTDPHSEDETAAKHVLRYLSATVDLKITY 1160          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 247 bits (631), Expect = 9.290e-65
Identity = 142/368 (38.59%), Postives = 214/368 (58.15%), Query Frame = 2
Query: 1013 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHR-ENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113
            P+S AEA   PE  +W+ AM+EE   + + GT+  ED   LPAGR  I  KW+F +K  EDG+++ YK RLVAQG+SQ+ G  + ET APV R+  +R+   +AA  D E+   D+  AYLN  +EEE++++ P      S     V RLRK+L GLKQSGR WN   D  L  IG ++   D C+Y    +G  T  ++ V+VDDL+I     E++ + K  +   F ++ +G   +++G E++RDR NGTI++SQ  YI  VL R+G    R V TP++  V I    + D  ++P  +G        Y+ ++GSL+YA+ GTRPD+++ V +  +   +P  E +   KR+ RYL+   +L + F
Sbjct:  879 PRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGS---GRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT--IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNV-ILKKRTDDLVADPAMVGG-------YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVF 1230          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT)

HSP 1 Score: 245 bits (625), Expect = 4.300e-64
Identity = 138/370 (37.30%), Postives = 216/370 (58.38%), Query Frame = 2
Query: 1010 EPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHR-ENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVK-ISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113
            EP + +EAL GP AE+W  AM++E ++L ++  WE  +   LP  RKA+  KW+FK K   DGS+  +K RLVAQGFSQ  G  + ET +PV R   IR+V  L+ +   +L   D+  A+LN  +E+E+++K P        +   V +L KSL GLKQS R WN+ LD+ L  IG  ++ +D C+Y   +DG     +VA++VDD+++ G   E +  +K +I++RF+++ +G L  +LG +V ++  +  + I Q +Y   ++K+YG   C+ V TPV+   K +SA E ++           L N  EY+  VGSL+Y S+ TRPD+ + V+  A+   +P  E +   KRIFRYL    + G+ +
Sbjct:  759 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSE-----------LFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLY 1109          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1M2VT18_TRAPU3.480e-6940.59Retrovirus-related Pol polyprotein from transposon... [more]
A0A6S7JEY7_PARCT2.010e-6637.53Reverse transcriptase Ty1/copia-type domain-contai... [more]
W8BWJ0_CERCA2.360e-6638.21Retrovirus-related Pol polyprotein from transposon... [more]
A0A7D9HZ03_PARCT7.080e-6636.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A067T5Q4_GALM38.410e-6639.08Integrase catalytic domain-containing protein (Fra... [more]
W8AQS8_CERCA1.840e-6536.96Retrovirus-related Pol polyprotein from transposon... [more]
A0A0C9RAA9_9HYME2.500e-6537.13POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus ... [more]
B6V6Z8_DROME6.050e-6536.83Polyprotein n=1 Tax=Drosophila melanogaster TaxID=... [more]
A0A284QR88_ARMOS9.290e-6538.59Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A6S7HEL0_PARCT4.300e-6437.30Retrovirus-related Pol poly from transposon TNT 1-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9574contigH-paniculata_contig9574:5523..8225 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score130.2
Seed ortholog evalue1.9e-27
Seed eggNOG ortholog65672.G4T9D2
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs227R3@155619,38DPC@33154,3H58M@355688,3NUZ7@4751,3UY7N@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
Exons3
Model size2561
Cds size1032
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9574.17284.1prot_H-paniculata_contig9574.17284.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9574 6691..7819 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931188.2493868-UTR-H-paniculata_contig9574:5522..61601622931188.2493868-UTR-H-paniculata_contig9574:5522..6160Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9574 5523..6160 -
1691481630.3693173-UTR-H-paniculata_contig9574:5522..61601691481630.3693173-UTR-H-paniculata_contig9574:5522..6160Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9574 5523..6160 -
1622931188.29013-UTR-H-paniculata_contig9574:6205..66901622931188.29013-UTR-H-paniculata_contig9574:6205..6690Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9574 6206..6690 -
1691481630.379181-UTR-H-paniculata_contig9574:6205..66901691481630.379181-UTR-H-paniculata_contig9574:6205..6690Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9574 6206..6690 -
1622931188.339035-UTR-H-paniculata_contig9574:7819..82251622931188.339035-UTR-H-paniculata_contig9574:7819..8225Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9574 7820..8225 -
1691481630.4117634-UTR-H-paniculata_contig9574:7819..82251691481630.4117634-UTR-H-paniculata_contig9574:7819..8225Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9574 7820..8225 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931188.3063526-CDS-H-paniculata_contig9574:6690..73901622931188.3063526-CDS-H-paniculata_contig9574:6690..7390Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9574 6691..7390 -
1691481630.3876138-CDS-H-paniculata_contig9574:6690..73901691481630.3876138-CDS-H-paniculata_contig9574:6690..7390Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9574 6691..7390 -
1622931188.3214073-CDS-H-paniculata_contig9574:7487..78191622931188.3214073-CDS-H-paniculata_contig9574:7487..7819Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9574 7488..7819 -
1691481630.3969622-CDS-H-paniculata_contig9574:7487..78191691481630.3969622-CDS-H-paniculata_contig9574:7487..7819Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9574 7488..7819 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9574.17284.1

>prot_H-paniculata_contig9574.17284.1 ID=prot_H-paniculata_contig9574.17284.1|Name=mRNA_H-paniculata_contig9574.17284.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=344bp
MARHQSWTTFASSAARRMLCSSRSRDASLTTKHGRGCFWGTTRTTRVITY
KNPENKSVQLSRKVRFDEEDFVTGHRGQQEHDGTRNMEHFFQHRQSRQRS
LDPAPEVSKQAYDDDGESNGDSKTKDAEPAVEDAPSAGTAAPASRGNTTK
QSGMEAQRPRDRSPIRTRARARENCEQDPGATMRVAKVKGTGNLTEAESK
GEPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAI
RTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIR
SVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*
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mRNA from alignment at H-paniculata_contig9574:5523..8225-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9574.17284.1 ID=mRNA_H-paniculata_contig9574.17284.1|Name=mRNA_H-paniculata_contig9574.17284.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2703bp|location=Sequence derived from alignment at H-paniculata_contig9574:5523..8225- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCATCTTCGTCGACGACTACAGCAAAATGCGCAAAGCCTATACCTTGCG ACAAAAGTCGGGGGCGCTATGGGCCCTGAAAAATTTCGAGAGGGACGTAG CGAGGGCAAACCGTTTGCGGATTAAGCGCCTTCGGTCGGATCAGGGAGGA GAATATATTGGGAAGCCTTTTAGGCAATTCTGCTCGGAAAATGGCATCAA GCAGGAGTTTTCTGCCGCCTATACACTGCAACAAAATGGTGTGGCGGAGC GCAGCTGGCGCAGCATTTTCGAGATGGCAAGAGCTAGCATGACCACCGCC AACATGGGTCATCGATATTGAGCGGAAGCGGTGCGCTCGGCAGTGTACTG CCTAAATCGCGCCCCGACGCGACCACACAACGGAGGAGCGCCGTACGAAA AATGGCATGGCGAGGCACCAAAGTTGGACCACCTTCGCGTCTTCGGCTGC ACGGCGTATGTTATGCTCCAGCCGCAGCAGAGACGCAAGCTTGACGACAA AGCATGGGCGGGGGTGTTTCTGGGGTACGACGAGGACAACCCGAGTTATC ACATATAAAAACCCAGAAAACAAGAGCGTCCAGTTGAGCAGGAAAGTGAG ATTTGACGAAGAGGACTTCGTAACGGGTCATCGCGGACAGCAGGAGCACG ACGGGACGCGCAACATGGAACATTTTTTTCAACACCGCCAGTCACGCCAG CGGTCACTCGATCCCGCGCCCGAGGTAAGCAAGCAAGCGTAACTCGGAAG ACCGGACGTCGGCGTAACAAATGCCGCCGATATTACCAACACATTTGCTG CCAGTCGCCAGCGCAAACCCATTCAGCGTCTTGAGCTATGACGATGATGG CGAAAGTAATGGCGACTCCAAAACGAAGGATGCGGAGCCCGCAGTCGAAG ACGCACCATCAGCAGGAACAGCCGCACCCGCGTCGCGGGGGAACACCACG AAGCAGTCGGGAATGGAGGCGCAGCGTCCGCGAGATCGGTCACCAATACG AACACGGGCGAGAGCAAGGGAAAACTGCGAACAAGATCCAGGCGCTACCA TGCGCGTGGCAAAAGTGAAAGGCACTGGCAACCTTACAGAAGCGGAATCT AAGGGGGAGCCGAAGTCCGCGGCAGAAGCATTAAAGGGTCCAGAGGCGGA AAAATGGCGGGCGGCAATGGAGGAAGAATGGGAAGCGTTGGTGGACAATG GGACATGGGAAAGCGAAGACCCAGGGAGGTTACCGGCAGGGCGGAAGGCG ATTCGTACAAAATGGATTTTCAAGCGGAAACTGAAGGAGGACGGCAGCGT GGCATGCTACAAAGTGCGACTGGTGGCTCAAGGTTTTTCACAGGTGGAGG GTGAAAAATTCTTTGAAACCAGTGCCCCCGTAGCTCGCATGTCGATGATA CGTTCTGTTTTTTGCCTGGCCGCCGAACACGATTTCGAATTAGAAGGCAC GGACCTAGATGTGGCTTATTTGAACGCCCCGGTAGAAGAAGAGCTGTTTG TTAAGCTACCCCCCGAGCTTTCCCCTTTCTCCTAAGACATACCGTTTGTG CGCCGCCTGCGTAAAAGCCTGTGCGGCCTCAAGCAGAGCGGCCGAAACTG GAATAATACTCTTGACGATTTTCTTGTAGGGATAGGACTCAACCGTTCCA CTACCGACTCATGCTTGTACTTTTCCCGCGACGATGGGGGAGAAACAAAC CTTCTGGTGGCCGTCTATGTTGACGACCTGGTCATTGTTGGCCATCGTGA GAACGTAGACGACTTGAAGCATAACATAAGTCAGCGTTTTAGGATGGAAG GCGTGGGCTCTCTCTCGCGCGTGTTGGGTAAAGAAGTACGACGTGACCGC CCTAATGGTACCATAACCATCTCGCAGGGTAGCTACATCCGCGAGGTACT AAAAAGGTACGGTTTTAACGAGTGTCGAGGAGTACCCACCCCTGTAGAGG GAAAAGTGAAGATTTCGGCACCCGAGTCGACCGACAACCCCTCCGAACCG AATTCACTTGGATCTGTACTGTCGGACATAGGCGTAGGAGTACAAGAAAG CAACAGATTGAGAAGTGGCAATTCAACGGAATACAGAGGCATGGTAGGAT CGCTCATGTACGCCTCGACAGGGACTAGACCTGATGTAGCATACACGGTA CACCAAGCAGCACGTCGTATGGAGGACCCATATCGGGAAGACTTCGGTAC ATGCAAGCGCATTTTTCGCTATCTCAGTACTGTGCCTGACCTCGGCATTA CGTTCGGTGGTTAAGAGTAATGGTCACTGTCTGGAAGGATTCGTCGATGC CGATTGGGCGGAAGATGTTGAGGACCGAAAGTCCACAACAGGATACATTT TCATGCTGAACGGTGGTGCAATAAGTTGGTGCTCTAGGAAGCAACAGTTA GTCACGTGATCCAGCACAGAGGCAGAGTACGTTGCTGCAGGAGAAGCGGG AAAGGAGACGGTATATCTTAGGGAGTTACTAGGATCGATAGGTTTCGGAT GCAGGGGGAGCACGACATTGCTTGGAGACAATAAATCAGCTATCAATCTC AGTAAGGGATCTGGCGCACACTGCAGGACAAAGCACATCGGAGTGCGCTG GCACGGAATTCAAGAGTGGATTCGGGAAGGAATATTGGCATTGAAATACG TGCAGTCCGGCGATCAACTTGCTGACATTTTAACGAGAGCACTCACTAAG CAA
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Coding sequence (CDS) from alignment at H-paniculata_contig9574:5523..8225-

>mRNA_H-paniculata_contig9574.17284.1 ID=mRNA_H-paniculata_contig9574.17284.1|Name=mRNA_H-paniculata_contig9574.17284.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2064bp|location=Sequence derived from alignment at H-paniculata_contig9574:5523..8225- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGAGGCACCAAAGTTGGACCACCTTCGCGTCTTCGGCTGCACGGCG
TATGTTATGCTCCAGCCGCAGCAGAGACGCAAGCTTGACGACAAAGCATG
GGCGGGGGTGTTTCTGGGGTACGACGAGGACAACCCGAGTTATCACATAT
AAAAACCCAGAAAACAAGAGCGTCCAGTTGAGCAGGAAAGTGAGATTTGA
CGAAGAGGACTTCGTAACGGGTCATCGCGGACAGCAGGAGCACGACGGGA
CGCGCAACATGGAACATTTTTTTCAACACCGCCAGTCACGCCAGCGGTCA
CTCGATCCCGCGCCCGAGGTAAGCAAGCAAGCATGGCGAGGCACCAAAGT
TGGACCACCTTCGCGTCTTCGGCTGCACGGCGTATGTTATGCTCCAGCCG
CAGCAGAGACGCAAGCTTGACGACAAAGCATGGGCGGGGGTGTTTCTGGG
GTACGACGAGGACAACCCGAGTTATCACATATAAAAACCCAGAAAACAAG
AGCGTCCAGTTGAGCAGGAAAGTGAGATTTGACGAAGAGGACTTCGTAAC
GGGTCATCGCGGACAGCAGGAGCACGACGGGACGCGCAACATGGAACATT
TTTTTCAACACCGCCAGTCACGCCAGCGGTCACTCGATCCCGCGCCCGAG
GTAAGCAAGCAAGCCTATGACGATGATGGCGAAAGTAATGGCGACTCCAA
AACGAAGGATGCGGAGCCCGCAGTCGAAGACGCACCATCAGCAGGAACAG
CCGCACCCGCGTCGCGGGGGAACACCACGAAGCAGTCGGGAATGGAGGCG
CAGCGTCCGCGAGATCGGTCACCAATACGAACACGGGCGAGAGCAAGGGA
AAACTGCGAACAAGATCCAGGCGCTACCATGCGCGTGGCAAAAGTGAAAG
GCACTGGCAACCTTACAGAAGCGGAATCTAAGGGGGAGCCGAAGTCCGCG
GCAGAAGCATTAAAGGGTCCAGAGGCGGAAAAATGGCGGGCGGCAATGGA
GGAAGAATGGGAAGCGTTGGTGGACAATGGGACATGGGAAAGCGAAGACC
CAGGGAGGTTACCGGCAGGGCGGAAGGCGATTCGTACAAAATGGATTTTC
AAGCGGAAACTGAAGGAGGACGGCAGCGTGGCATGCTACAAAGTGCGACT
GGTGGCTCAAGGTTTTTCACAGGTGGAGGGTGAAAAATTCTTTGAAACCA
GTGCCCCCGTAGCTCGCATGTCGATGATACGTTCTGTTTTTTGCCTGGCC
GCCGAACACGATTTCGAATTAGAAGGCACGGACCTAGATGTGGCTTATTT
GAACGCCCCGGTAGAAGAAGAGCTGTTTGTTAAGCTACCCCCCGAGCTTT
CCCCTTTCTCCTAACTATGACGATGATGGCGAAAGTAATGGCGACTCCAA
AACGAAGGATGCGGAGCCCGCAGTCGAAGACGCACCATCAGCAGGAACAG
CCGCACCCGCGTCGCGGGGGAACACCACGAAGCAGTCGGGAATGGAGGCG
CAGCGTCCGCGAGATCGGTCACCAATACGAACACGGGCGAGAGCAAGGGA
AAACTGCGAACAAGATCCAGGCGCTACCATGCGCGTGGCAAAAGTGAAAG
GCACTGGCAACCTTACAGAAGCGGAATCTAAGGGGGAGCCGAAGTCCGCG
GCAGAAGCATTAAAGGGTCCAGAGGCGGAAAAATGGCGGGCGGCAATGGA
GGAAGAATGGGAAGCGTTGGTGGACAATGGGACATGGGAAAGCGAAGACC
CAGGGAGGTTACCGGCAGGGCGGAAGGCGATTCGTACAAAATGGATTTTC
AAGCGGAAACTGAAGGAGGACGGCAGCGTGGCATGCTACAAAGTGCGACT
GGTGGCTCAAGGTTTTTCACAGGTGGAGGGTGAAAAATTCTTTGAAACCA
GTGCCCCCGTAGCTCGCATGTCGATGATACGTTCTGTTTTTTGCCTGGCC
GCCGAACACGATTTCGAATTAGAAGGCACGGACCTAGATGTGGCTTATTT
GAACGCCCCGGTAGAAGAAGAGCTGTTTGTTAAGCTACCCCCCGAGCTTT
CCCCTTTCTCCTAA
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