mRNA_H-paniculata_contig9572.17282.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9572.17282.1
Unique NamemRNA_H-paniculata_contig9572.17282.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: D8LHG5_ECTSI (DNA primase large subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG5_ECTSI)

HSP 1 Score: 773 bits (1995), Expect = 5.200e-279
Identity = 373/441 (84.58%), Postives = 402/441 (91.16%), Query Frame = 1
Query:    1 QVISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSVHGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDSRFGPLLQNMSKQYLGRDFGNADGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGADKDAVLRQVKSKNYQLACQRHFEATHKGHETAGISTDGVGNHPNAWMHASMEFHKAKV 1323
            + ISMY EAPFEEITLDEFEL+ALDRLQVLRKIEDLKARNVRGDD++R+LRESLHKYMK+STL+++SA AD RKD ISHFILRLAYCRSEDLRRWFLTQETALFR+RLEELSP  M KFI +H L FEVV PERKAA+ RSKL S+    ++  D+TTYY+IPFWQA DL+G RQVYLE GFAYVPVQRVVTIVVAR+RMGIS+SL+EASNHFA+VTSDSRFGPLLQNMSKQYLGRDFGN DG D D I PGMLN+LAERSMPLCM+QLH+ LNREHKLKHWGRLQYGLFLKGAGL VDDAMAFWQ  FTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPP AGDHHGCPYRHYDEDHLSSLLSQVRI   DKDA+LRQVKSKNYQLACQRHFEATHKG+E +G+STDGVGNHPNAWMHASMEFHK K 
Sbjct:   25 KAISMYNEAPFEEITLDEFELVALDRLQVLRKIEDLKARNVRGDDFRRALRESLHKYMKLSTLNEESASADKRKDTISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPAEMSKFIPEHGLFFEVVTPERKAAL-RSKLLSIPAAPVMEFDRTTYYRIPFWQASDLIGKRQVYLEGGFAYVPVQRVVTIVVARYRMGISKSLMEASNHFAYVTSDSRFGPLLQNMSKQYLGRDFGNGDGTDPDNIKPGMLNSLAERSMPLCMKQLHSALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQAMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSSLLSQVRIGATDKDAILRQVKSKNYQLACQRHFEATHKGYEASGVSTDGVGNHPNAWMHASMEFHKEKA 464          
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: A0A835YS26_9STRA (DNA primase large subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS26_9STRA)

HSP 1 Score: 583 bits (1504), Expect = 1.230e-204
Identity = 286/442 (64.71%), Postives = 345/442 (78.05%), Query Frame = 1
Query:    1 QVISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSVHGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDSRFGPLLQNMSKQYLGRDFGNADGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGADKDAVLRQVKSKNYQLACQRHFEATHKGHETAGISTDGVGNHPNAWMHASMEFHKAKVG 1326
            ++ISMYT  P EE+TLDEFEL ALDRL VLRK+EDLKAR  +G ++   L ++++ +MKI++LS++   A +RKD +SHFILRLAYCR+EDLRRWFLTQE+ALFRYRLE LS  G+  FI  + L+FEVV  + KAA  RS+L +  G      ++ T+Y+IPF QA DL+G R VYLE G+AYVPVQRVV IVVARFR  +SRSL EAS  F  VT D RFGPLLQNMS+QY+GRDFG       D I P  L+ +A RSMPLCMR LH  L R+HKLKH GRLQYGLFLKGAGL ++DA AFWQ++FT++M +D F K YAYNVRHMYGKEGKRTNYTPYSCLKIIMG  PGAG+HHGCPYRH+DE HLS+L  Q+++  AD+DA+   VK +NYQLACQRHFEATH+G+E AG+S DGVGNHPNAW  ASM++ KAK G
Sbjct:   23 EIISMYTTPPSEELTLDEFELFALDRLTVLRKLEDLKARGYKGREFTEHLEKAVNTHMKINSLSENVEEA-IRKDTVSHFILRLAYCRTEDLRRWFLTQESALFRYRLESLSSTGIISFIQSNGLAFEVVSADDKAA-RRSRLLTAPGATAAEFERCTFYRIPFAQATDLIGQRLVYLEGGYAYVPVQRVVAIVVARFRAALSRSLAEASGAFPAVTGDPRFGPLLQNMSRQYVGRDFGGXXXXXXDAIRPEHLDAMAARSMPLCMRGLHLALRRDHKLKHMGRLQYGLFLKGAGLSMEDAAAFWQSEFTRVMSVDAFTKGYAYNVRHMYGKEGKRTNYTPYSCLKIIMGAAPGAGEHHGCPYRHFDESHLSALFGQLKLERADRDAMAAHVKGRNYQLACQRHFEATHRGYEDAGVSADGVGNHPNAWTAASMQYWKAKEG 462          
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: W7TRK8_9STRA (DNA primase large subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRK8_9STRA)

HSP 1 Score: 468 bits (1205), Expect = 4.220e-159
Identity = 233/452 (51.55%), Postives = 319/452 (70.58%), Query Frame = 1
Query:    1 QVISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSV----------HGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDSRFGPLLQNMSKQYLGRDFGNADGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGADKDAVLRQVKSKNYQLACQRHFEATHKGHETAGISTDGVGNHPNAWMHASMEFHKAKVG 1326
            +++S+Y  AP  EITL+EFEL ALDRLQ+LR IE L+ R ++GD+++  L E +   M ++  + +    ++RKD+ISHFILR+AYC++EDLRRWFL  E+ LFR+RLE L      KF+ Q  L+++VV  E    + +++LQ+V           G   + V +T +++IPF QA+DLV  RQV+LE GFAYVPV+R+V+I+VARFR  +SR L+EA     +V +D R  PL+ NM+KQY G+DF      D+  +    L+ LA+RSMP+CMR LH  L  EHKLKHWGRLQYGLFLKGAG+G++DA+ FW+ +FTKIM  D F KQYAY++RH +GKEGKR +YTP++C KII+G  PG G+ HGCP+RHYDE +L+ LL +  +   D+D +++  K ++YQLAC +HFE THKG E+  IS DGVGNHPNA+  ASM F+K K G
Sbjct:   23 RLLSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIISACMPMTLGTAE----EVRKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRL-KAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLTDGRIAPLVSNMAKQYTGKDFSGTKTGDSLDLND--LDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESL-ISMDGVGNHPNAFFAASMAFYKEKNG 466          
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: A0A7S3H234_9STRA (DNA primase large subunit n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H234_9STRA)

HSP 1 Score: 462 bits (1190), Expect = 5.830e-157
Identity = 227/446 (50.90%), Postives = 310/446 (69.51%), Query Frame = 1
Query:    1 QVISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSD---DSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSVHGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDSRFGPLLQNMSKQYLGRDFGNADGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGADKDAVLRQVKSKNYQLACQRHFEATHKGH-ETAGISTDGVGNHPNAWMHASMEFHKAKVG 1326
            +++S+Y E P +E+TLDEFE+++LDRLQ+LR I+ LK +   G + + +    L++  K   LS+        ++ +D++SHFILRLAYCR+E+LRRWFL QE +L +YRL+ LS +    F+  + + F+ V  E K +  + KL  + G   +++ KTT+YK+PF QA+ LV +R VYLE GFAYVP+QR+V+I+V RFRM +SR+L EA+N F  V SD R GPLL+NM+KQ++G DF   + +  DK++P  +   AE +MPLCM+ LH+ L REHKLKHWGRLQYGLFLKGAGL ++ A  FW++ FTK++  DQF K YAY+ RHMYGKEG R NYTPYSC+KIIMG PP  G  HGCPYRH  ++ LSSLLS ++++  D   +    KS NYQ+ACQRHF+ TH GH     + +D V NHPN W   S+ +HK K G
Sbjct:   22 RLLSLYAEPPQQELTLDEFEVVSLDRLQLLRSIDVLKTKG--GTEGEHAFNHQLYELEKKYLLSNREFSHRMNEVERDQVSHFILRLAYCRTEELRRWFLGQECSLMKYRLDSLSDEERASFMLSNGMDFDPVSNEEKNS-RKDKLIDLAGVTSVSIIKTTFYKVPFQQALSLVSSRSVYLEKGFAYVPLQRLVSIIVTRFRMQLSRALAEAANSFDIVGSDHRIGPLLKNMNKQFIGNDFTKTNQS-IDKLSPDKIELAAEVNMPLCMKNLHSNLKREHKLKHWGRLQYGLFLKGAGLDLEGAQQFWESHFTKLISHDQFVKSYAYSFRHMYGKEGARKNYTPYSCMKIIMGTPPETGAFHGCPYRHMPDNQLSSLLSSLKLSTPDVSEIAALAKSSNYQIACQRHFDVTHPGHLNNPELKSDAVANHPNLWFQTSVNYHKLKNG 463          
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: A0A7S4A6J1_9STRA (DNA primase large subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6J1_9STRA)

HSP 1 Score: 445 bits (1144), Expect = 3.690e-150
Identity = 220/441 (49.89%), Postives = 301/441 (68.25%), Query Frame = 1
Query:    7 ISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQGMGKFISQHDLSFEVV-DPERKAAISRSKLQSVHGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDSRFGPLLQNMSKQYLGRDFGNADGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGADKDAVLRQVKSKNYQLACQRHFEATHKGHETAG----ISTDGVGNHPNAWMHASMEFHK 1314
            +S+Y + P EE+TL+EFE+ A+DRL+VLR I+ L+ +  +  + +  L   + + + +++ +   A +D RKD +SHFILRLAY RSE+LRRWFLTQE ALFR+RL  L   G  +F+ +H L FE V D ER A ++   L  +     +     TYY++PF +A+DL+G R+VYLE G+AYVP  ++ +IVV+RFR  +SRSL +AS   A   +D R GPLL N+ K  L R   + D  D + ITP  ++ LA++SMPLCM+QLH  L R+HKLKHWGR QYGLFLK AGL ++D + F+Q +FTKIM  DQF K+YAYN+RH YGKEGKRT Y+PY C K++M   PG G++HGCPYRH+D DHL+++LS+  +   ++  VL + K +NYQ+ACQRHFE  HK     G     + DGVGNHPNAW  AS  +H+
Sbjct:   22 VSLYEKPPREEMTLEEFEVFAVDRLKVLRTIDALRQKGFKPKELEAELAPVVRELLPLAS-AGPQAPSDARKDSVSHFILRLAYSRSEELRRWFLTQECALFRHRLSRLRGDGFARFLREHGLRFEEVPDSERDARVT--SLARIKNYENVPAQTATYYRVPFLEAIDLIGRREVYLEKGYAYVPQAKLHSIVVSRFRASLSRSLAKASGSLAAAAADPRLGPLLTNVEKHDLERQ--DVDDDDIEGITPEQIDALADQSMPLCMQQLHYALKRDHKLKHWGRQQYGLFLKAAGLSMEDQLRFFQAEFTKIMTHDQFSKEYAYNIRHRYGKEGKRTEYSPYGCYKLVMDMAPGPGEYHGCPYRHFDADHLAAVLSKTSLDAGEQSLVLGKAKERNYQIACQRHFEFAHKKQTVNGKKVVANLDGVGNHPNAWFKASRVYHQ 457          
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: F0YER9_AURAN (DNA primase large subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YER9_AURAN)

HSP 1 Score: 434 bits (1116), Expect = 4.550e-146
Identity = 223/453 (49.23%), Postives = 302/453 (66.67%), Query Frame = 1
Query:    4 VISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQGMGKFISQHDLSFEVVDPE----RKAAISRSKLQSVHGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDSRFGPLLQNMSKQYL--GRDFGNADGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGADKDAVLRQVKSKNYQLACQRHFEATHKGHETAGIST--DGVGNHPNAWMHASMEFHKAKVGSRTP 1338
            ++S+Y   P  E+TLDEFE+ A+DRL++LR I+ LK +  +  + +  L   L + + +   S +  +AD RKD++SHFILRL Y R+E++RRWFLTQE ALF++RL  LS   +G F++ + L FE V       R  A+S+       G A        YY++PF +A+DL+G R+VYLE G+AYVP  ++  IVVARFR  +SRSL +AS+  A    D R  PLL N+ K  L  G+D    +  D + I P  ++ LA++SMPLCM+QLH  L R+HKLKHWGR QYGLFLK AGL ++D + F+Q +FTKIM +D F K+YAYN+RH YGKEGKRT Y+PY C K+IM   PG G++HGCPY+HYD+DHL+S+L  + I+     A+L Q KSKNYQLACQ+HFE TH   + AG++   DGVGNHPNAW  AS  +HK    ++ P
Sbjct:   23 LVSLYERPPQTELTLDEFEIYAVDRLKILRTIDALKQKGFKPRELEAELAPVLAQALPLRG-SAEHVKADERKDQVSHFILRLGYSRTEEMRRWFLTQECALFKHRLGTLSGPQLGLFLAANGLKFEEVSDADVDARSVALSKISKTGDGGAA-------GYYRVPFVEAIDLIGRREVYLEKGYAYVPAAKLHAIVVARFRSALSRSLAKASSSLAAAAGDPRLSPLLNNIEKHDLSNGKDL---EDDDVEGIHPEQIDALAKQSMPLCMQQLHGALKRDHKLKHWGRQQYGLFLKAAGLSMEDQLRFFQAEFTKIMTVDAFSKEYAYNIRHRYGKEGKRTEYSPYGCYKLIMDMAPGPGEYHGCPYKHYDDDHLASILGAMDISRESSQAILGQAKSKNYQLACQKHFEVTHP--KAAGVAARPDGVGNHPNAWFKASRIYHKEVHEAKNP 462          
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: A0A7S1ZF14_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZF14_9STRA)

HSP 1 Score: 424 bits (1089), Expect = 1.200e-141
Identity = 217/459 (47.28%), Postives = 313/459 (68.19%), Query Frame = 1
Query:    7 ISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLS-------------DDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEEL--SPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSVHGTALL--NVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDS-RFGPLLQNMSKQYLGRDFGNADGA-DADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGA-DKDAVLRQVKSKNYQLACQRHFEATHKGHETA-GISTDGVGNHPNAWMHASMEFHKAK 1320
            +  Y E P  E++LDEFE  AL RL+VLRKIE+L+A+N+ G +++ +L  +L + +    L+              + ++ + + D  SHFILR AYCR+EDLRRWFLTQE ALFR+RL+++  S      F+ + DL F+ V    K  + R  L S+  + +    +  + +Y++PF QA+DLV  R  Y+  G AYVP  R+V+I+VA++RM +S+SL+ A+  F  VT ++ R  PLL++M+ QYLGRD+G  D   + D++T   +++ A++SMPLCM QLH  + R+ KLKH GRLQYGLFLKG G+  ++ +AF+Q  FTKIM  +QF K Y+YN+RHM+G+EGKR +Y+PYSC+KII+GNPP  G+ HGCP+RHYD+  LSSLL+++ +  A D+ A+L Q K++NYQLAC +HFE  H G  +  G+S +GVGNHPNAW  AS+ +HKAK
Sbjct:   36 LDFYAEIPSYELSLDEFEEFALARLKVLRKIEELRAQNITGAEFRTNLESTLKENLTTQNLTASKSFGTIAKPSAKEQSKLNNKIDTASHFILRAAYCRTEDLRRWFLTQECALFRFRLDKILTSSSAFRAFLVKADLHFDRVSDLEKERL-REFLLSIPNSNVSPGELSVSVFYQVPFVQALDLVAKRLCYVHDGMAYVPQSRMVSIIVAKYRMALSKSLVRAALSFGEVTEENERIAPLLKSMNSQYLGRDYGKEDTPLENDELTANTVDSYAKQSMPLCMSQLHAGMKRDSKLKHQGRLQYGLFLKGGGMSTEEHLAFFQRVFTKIMTTEQFNKNYSYNIRHMHGQEGKRASYSPYSCMKIILGNPPQGGESHGCPFRHYDDSSLSSLLTKLNVGSASDRSAILAQKKARNYQLACAKHFEVMHPGAASVEGLSMNGVGNHPNAWFAASVGYHKAK 493          
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: A0A7S2UM83_9STRA (DNA primase large subunit n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UM83_9STRA)

HSP 1 Score: 419 bits (1076), Expect = 9.410e-140
Identity = 217/453 (47.90%), Postives = 300/453 (66.23%), Query Frame = 1
Query:   10 SMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRK-DKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEEL----SPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSVHGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDS-RFGPLLQNMSKQYLGRD-FGNADG-ADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAG-ADKDAVLRQVKSKNYQLACQRHFEATHKGHETA-GISTDGVGNHPNAWMHASMEFHKAKVGSRTP 1338
            + Y E P  E++LDEFE  AL RL+VLRKIE+LK RN+ GD +   L E+L   + ++  ++       +K D  SHFILR AYC SEDLRRWF  QET LF+YR E L    S   + +F  + ++  + V    K  + R  L S           T Y+ +PF QA+DLV  RQ Y+EAG AYVP+ ++V+IV  +F   +S+SL  A   F+ VT+++ R  PLL++M  QY  ++ +   +G +D  ++T   ++T A +SMPLCM QLH+ L ++HKLKHWGRLQYGLFLKGAG+ +++++ F+Q +F KI+  +QF K Y+YN+RHMYGKEGKR +YTPY+C KII+GNPP +GDHHGCPYRHYD+ HLSSLL+++ I   AD+DA++   K++N QLAC RHFEA H    +  G++ D VGNHPNAW   S+ +H AK  +  P
Sbjct:   36 NFYNEVPSAELSLDEFEEAALARLKVLRKIEELKVRNITGDSFHTMLMETLKANLLVADTTNKKKEEQSKKLDVNSHFILRAAYCHSEDLRRWFKAQETFLFKYRFENLMKDPSRTRLRQFFRESNIDLDRVSASEKERL-RPMLLSCSDITPTLFPTTPYFAVPFTQALDLVAKRQCYVEAGLAYVPLPKIVSIVTNKFTTALSKSLTNAGYAFSKVTNENGRINPLLKSMHSQYADKNRYTTGEGMSDGQELTSQNVDTYAAQSMPLCMSQLHSGLQQDHKLKHWGRLQYGLFLKGAGMTMEESLMFFQREFGKIITAEQFNKNYSYNIRHMYGKEGKRASYTPYNCTKIILGNPPQSGDHHGCPYRHYDDTHLSSLLTKMNIGTPADRDAIMSHKKAQNPQLACVRHFEAVHPAATSVKGVTLDNVGNHPNAWFAGSVSYHAAKSDNVKP 487          
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: A0A7S2LEW2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LEW2_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 9.890e-139
Identity = 220/457 (48.14%), Postives = 309/457 (67.61%), Query Frame = 1
Query:    7 ISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQ------GMGKFISQHDLSFEVVDPERKAAISRSKLQSVHG--TALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSD--SRFGPLLQNMSKQYLGRDFGNA----DGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAG-DHHGCPYRHYDEDHLSSLLSQVRIAG-ADKDAVLRQVKSKNYQLACQRHFEATHKGHETA-GISTDGVGNHPNAWMHASMEFHKAKVG 1326
            + MY + P  E++LDEFE  AL RL+VLRKIE++K RN+  + ++  L  S+      + L+    +   + D  SHFILR AYCR+EDLRRWFL QE  LFR+RLE LS        G+ +F++ +D   + V  E K  +S  KLQ V G  T+      T YY++PF QA++LV  R+ Y+E G AYVP+ R+V+IV A+FR+ +S+SL  A+  F  V  D  SR GPLL++M+ QY G    NA    DG +A  +T   ++ LA++SMPLCM+QLH  L R+HKLKH GRLQ+GLFLKGAG+ +++   F+Q +FT+IM  +QF K Y+Y++RHM+GKEGKR +YTPY+C+KII GNPP +G +HHGCPY+H+D+ +LS+LL++++I   AD+D ++   K  N+QLAC +HFE +H    +  G++ DGVGNHPNAW  AS+ +H AK G
Sbjct:   65 VDMYLDVPSFELSLDEFEEYALARLKVLRKIEEMKTRNLPPETFRTQLDASIK-----ANLTSTQQKHKTKLDVASHFILRAAYCRTEDLRRWFLAQECRLFRHRLENLSRSSSTNNSGLREFLANNDFDLDPVSREEKERLS-DKLQKVPGGPTSPGEFINTQYYRVPFVQALELVSRRECYVEKGQAYVPLARIVSIVAAKFRVALSKSLALAAGVFGQVAHDEASRIGPLLKSMNSQYTGPGAPNAVMGTDGENA--LTAATVDALADQSMPLCMQQLHQGLKRDHKLKHQGRLQFGLFLKGAGMSLEEHTLFFQREFTRIMTSEQFNKSYSYSIRHMHGKEGKRASYTPYNCMKIIFGNPPQSGVEHHGCPYKHFDDQNLSALLTKLKIGSVADRDVIMSHKKDGNFQLACAKHFEVSHPSATSVDGVNLDGVGNHPNAWFSASVSYHNAKNG 513          
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: B8CCN9_THAPS (DNA primase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCN9_THAPS)

HSP 1 Score: 413 bits (1061), Expect = 1.920e-138
Identity = 220/442 (49.77%), Postives = 300/442 (67.87%), Query Frame = 1
Query:    7 ISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEEL---SPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSVHGTAL-LNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSD--SRFGPLLQNMSKQYLGRDFGNA--DGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAG-DHHGCPYRHYDEDHLSSLLSQVRIAG-ADKDAVLRQVKSKNYQLACQRHFEATHKGHETA-GISTDGVGNHPNAWMHAS 1299
            + MY E P  E++LDEFE  AL RL+VLRKIE++K RN+  D +   L  S+      + L+  S + D+     SHFILR AYCR+EDLRRWFL QE  LFR+RL+     S  G+  F+++++   + V    K  + R KL SV G+   L  + T YY++PF QA++LV  R+ ++E GFAYVP+ R+V+IV A+FR  +S+SL  A+  F  V +D  SR GPLL++M+ QY G    NA  D +  + +T   ++ LA +SMPLCM+QLH  L R+HKLKH GRLQYGLFLKGAG+ +++ M F+Q +FTKIM  +QF K YAYN+RH +GKEGKR  YTPY+C+KII GNPP  G +HHGCPY+HYD+ +LS+LL++++I G +D+DA++   K  N+QLAC +HFE  H    +  GI+ DGVGNHPNAW  AS
Sbjct:    5 VDMYLETPAFELSLDEFEEYALARLKVLRKIEEMKTRNLPPDQFTSQLSASIK-----TNLNSTSKKVDIA----SHFILRAAYCRTEDLRRWFLAQECRLFRHRLDNCAKRSSDGLRDFLARNEFDLDRVQGREKERL-RDKLLSVPGSPNPLEFNATEYYRVPFVQALELVSKRECFVEKGFAYVPLGRIVSIVAAKFRATLSKSLALAAGVFGQVANDESSRIGPLLKSMNSQYTGPGAPNAVMDASGENALTAATVDALAAQSMPLCMQQLHVGLKRDHKLKHQGRLQYGLFLKGAGMPMEEHMLFFQREFTKIMTSEQFNKNYAYNIRHTHGKEGKRATYTPYNCMKIIFGNPPQTGVEHHGCPYKHYDDQNLSALLTKLKIGGLSDRDAIMAHKKEGNFQLACTKHFEVMHPAATSVEGINLDGVGNHPNAWFSAS 436          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHG5_ECTSI5.200e-27984.58DNA primase large subunit n=2 Tax=Ectocarpus TaxID... [more]
A0A835YS26_9STRA1.230e-20464.71DNA primase large subunit n=1 Tax=Tribonema minus ... [more]
W7TRK8_9STRA4.220e-15951.55DNA primase large subunit n=2 Tax=Monodopsidaceae ... [more]
A0A7S3H234_9STRA5.830e-15750.90DNA primase large subunit n=2 Tax=Spumella elongat... [more]
A0A7S4A6J1_9STRA3.690e-15049.89DNA primase large subunit n=1 Tax=Pelagomonas calc... [more]
F0YER9_AURAN4.550e-14649.23DNA primase large subunit n=1 Tax=Aureococcus anop... [more]
A0A7S1ZF14_9STRA1.200e-14147.28Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2UM83_9STRA9.410e-14047.90DNA primase large subunit n=2 Tax=Attheya septentr... [more]
A0A7S2LEW2_9STRA9.890e-13948.14Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8CCN9_THAPS1.920e-13849.77DNA primase (Fragment) n=1 Tax=Thalassiosira pseud... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9572contigH-paniculata_contig9572:399..9392 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score771.2
Seed ortholog evalue2.7e-220
Seed eggNOG ortholog2880.D8LHG5
Preferred namePRIM2
KEGG rclassRC00151,RC02795
KEGG koko:K01101,ko:K02685
KEGG ReactionR00375,R00376,R00377,R00378,R03024
KEGG Pathwayko00230,ko00240,ko00627,ko01100,ko01120,ko03030,map00230,map00240,map00627,map01100,map01120,map03030
KEGG ModuleM00261
Hectar predicted targeting categoryother localisation
GOsGO:0000082,GO:0000228,GO:0000278,GO:0000428,GO:0000723,GO:0001654,GO:0001745,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0003887,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005657,GO:0005658,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006270,GO:0006271,GO:0006273,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007275,GO:0007423,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009653,GO:0009887,GO:0009987,GO:0012505,GO:0016043,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019725,GO:0022402,GO:0022616,GO:0030880,GO:0030894,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032200,GO:0032201,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0034061,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043601,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044786,GO:0044843,GO:0046483,GO:0048513,GO:0048592,GO:0048731,GO:0048749,GO:0048856,GO:0050896,GO:0051276,GO:0051716,GO:0055029,GO:0060249,GO:0061695,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0071897,GO:0090304,GO:0090596,GO:0097159,GO:0097747,GO:0140097,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902295,GO:1902318,GO:1902494,GO:1902969,GO:1902981,GO:1903047,GO:1990234
EggNOG free text desc.DNA primase activity
EggNOG OGsCOG2219@1,KOG2267@2759
Ec32 ortholog descriptionDNA primase large subunit, eukaryotic/archaeal
Ec32 orthologEc-11_004160.1
EC3.1.3.41
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032
Exons10
Model size1341
Cds size1329
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931187.9226716-CDS-H-paniculata_contig9572:398..6081622931187.9226716-CDS-H-paniculata_contig9572:398..608Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 399..608 -
1691481630.2222018-CDS-H-paniculata_contig9572:398..6081691481630.2222018-CDS-H-paniculata_contig9572:398..608Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 399..608 -
1622931187.9454005-CDS-H-paniculata_contig9572:1851..19541622931187.9454005-CDS-H-paniculata_contig9572:1851..1954Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 1852..1954 -
1691481630.2368054-CDS-H-paniculata_contig9572:1851..19541691481630.2368054-CDS-H-paniculata_contig9572:1851..1954Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 1852..1954 -
1622931187.9670641-CDS-H-paniculata_contig9572:2743..28531622931187.9670641-CDS-H-paniculata_contig9572:2743..2853Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 2744..2853 -
1691481630.2445076-CDS-H-paniculata_contig9572:2743..28531691481630.2445076-CDS-H-paniculata_contig9572:2743..2853Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 2744..2853 -
1622931187.9807339-CDS-H-paniculata_contig9572:3606..37471622931187.9807339-CDS-H-paniculata_contig9572:3606..3747Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 3607..3747 -
1691481630.252766-CDS-H-paniculata_contig9572:3606..37471691481630.252766-CDS-H-paniculata_contig9572:3606..3747Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 3607..3747 -
1622931188.001511-CDS-H-paniculata_contig9572:4192..42881622931188.001511-CDS-H-paniculata_contig9572:4192..4288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 4193..4288 -
1691481630.267666-CDS-H-paniculata_contig9572:4192..42881691481630.267666-CDS-H-paniculata_contig9572:4192..4288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 4193..4288 -
1622931188.0197067-CDS-H-paniculata_contig9572:5435..55911622931188.0197067-CDS-H-paniculata_contig9572:5435..5591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 5436..5591 -
1691481630.276145-CDS-H-paniculata_contig9572:5435..55911691481630.276145-CDS-H-paniculata_contig9572:5435..5591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 5436..5591 -
1622931188.0432742-CDS-H-paniculata_contig9572:6721..68301622931188.0432742-CDS-H-paniculata_contig9572:6721..6830Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 6722..6830 -
1691481630.2845209-CDS-H-paniculata_contig9572:6721..68301691481630.2845209-CDS-H-paniculata_contig9572:6721..6830Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 6722..6830 -
1622931188.0641017-CDS-H-paniculata_contig9572:7765..78841622931188.0641017-CDS-H-paniculata_contig9572:7765..7884Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 7766..7884 -
1691481630.2924595-CDS-H-paniculata_contig9572:7765..78841691481630.2924595-CDS-H-paniculata_contig9572:7765..7884Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 7766..7884 -
1622931188.0821185-CDS-H-paniculata_contig9572:8234..84201622931188.0821185-CDS-H-paniculata_contig9572:8234..8420Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 8235..8420 -
1691481630.3028655-CDS-H-paniculata_contig9572:8234..84201691481630.3028655-CDS-H-paniculata_contig9572:8234..8420Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 8235..8420 -
1622931188.0985713-CDS-H-paniculata_contig9572:9281..93801622931188.0985713-CDS-H-paniculata_contig9572:9281..9380Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 9282..9380 -
1691481630.3111055-CDS-H-paniculata_contig9572:9281..93801691481630.3111055-CDS-H-paniculata_contig9572:9281..9380Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9572 9282..9380 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931188.1125593-UTR-H-paniculata_contig9572:9380..93921622931188.1125593-UTR-H-paniculata_contig9572:9380..9392Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9572 9381..9392 -
1691481630.3190553-UTR-H-paniculata_contig9572:9380..93921691481630.3190553-UTR-H-paniculata_contig9572:9380..9392Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9572 9381..9392 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9572.17282.1prot_H-paniculata_contig9572.17282.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9572 399..9380 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9572.17282.1

>prot_H-paniculata_contig9572.17282.1 ID=prot_H-paniculata_contig9572.17282.1|Name=mRNA_H-paniculata_contig9572.17282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=443bp
MYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESL
HKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALF
RYRLEELSPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSVHGTALLNV
DKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISR
SLIEASNHFAFVTSDSRFGPLLQNMSKQYLGRDFGNADGADADKITPGML
NTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAF
WQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPG
AGDHHGCPYRHYDEDHLSSLLSQVRIAGADKDAVLRQVKSKNYQLACQRH
FEATHKGHETAGISTDGVGNHPNAWMHASMEFHKAKVGSRTP*
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mRNA from alignment at H-paniculata_contig9572:399..9392-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9572.17282.1 ID=mRNA_H-paniculata_contig9572.17282.1|Name=mRNA_H-paniculata_contig9572.17282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8994bp|location=Sequence derived from alignment at H-paniculata_contig9572:399..9392- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTGATTTCGATGTATACGGAGGCCCCATTCGAGGAGATAACCCTTGA CGAGTTCGAGCTCATGGCCTTGGACAGGCTACAGGTCTTGCGCAAGATAG AAGACTTGAAGGTGCGCGTCTTGGTGGACTGGTCCAGGAAGAGAAAATAC TCATTTTCTCGCTTTCAGCACTTGTTTGCCCGCTTCGTTGTTGCCGATGT GTGTGTGTGTGTGTGTTTTGCAAGTTTATCCCCTTCGTTCATATCACTGT CGGCGTTTTCGCGGGGTAAGCGACATGTGGATGGAGATAGTCATGCTTAA TGTTTTGCAGTCTATTGACTTGCAGAGGAGCCGATTAGTGCTATTTAATA GGAACTCGAGTATTTGAGGTCAATTTTCCTAGGGCAGGGTGAGATACGCA TGAGATCCAAGCTGTTGGCATTCCGCGAAAATGTGTAGTGCAGTAACGGA AGCTAGCAGAGCTTTTGTCGCTGTCTTCGTCATGTTGATCGAGGCCGTGT TCAGTGCCTAAGTAGTCGATCAAATACCTTTGGTTCACGAAAGAGAAACA GTCGTCGATGTAGCAATGTTACTATTTATAGTTTGCTGTGTCAGCTCCGT CCAATGGACGCGGTCTGCTGTACTGTAATCCTCATGTTGTCACACCTTGA CCCAGCGTTGTAGCTGTCCTCGCCACGATACCATGATGGCCACCAACACT ATCAGTACCCCCACACGTTTGGCAACGTGGAAAAGAGCGATTGGGCAATG GAAATCGCTCTGATTAGAATAAAGCTCCGGCTTCCTGAAGATGCGTGGTG AATGATGTAAAAAATTCAGTATGCAAAACATGAGTACACCCCCCCCCCCC TCCCCCCGACAACGTGATATTTCATCCCCACCTATCCCCACCCACTCACC CGTCAACACACGTGGTCATGATGAAAAATTGTGTTCTGTCGAATTGCTGT CGTATGTTGACACGGCACGAAGGCGCGCAACGTGCGAGGCGATGACTACA AGCGGTCGCTGCGAGAGTCTCTGCACAAGTATATGAAGATCAGTACGCTC AGCGACGACAGCGCCCGCGCCGACATGCGCAAGGACAAAATCTCCCACTT CATCCTCAGGCTGGCCTACTGTCGCAGCGAGGATCTTCGCCGATGGTTCC TCACACAGGTTGGTGCTTGGGTTGTGTCTTGGTGTGATCGGTGGAAGGGT TGTAGTGGACGGCGTCTGTGATTGGTCGGTGCTGTGATATAATAGAGTTT TTTTTTTCGTGGGCATTTTGGGATTTGAGAGGTGTTGCTGTCGAGAGGGT TTCGAATTCAGGAGGGGGGATCAGATCGGACGGCTATCGTTATAGGGATG CAATAACTTGCCACCTACCTGCACATTTTTTTCTTCCGTTTGGAATTTAT TTTGAGAAGTAGATGAAGCGCTAATGTACAGTGTAGTGTAATCGTGGTGT ATTTGGTCGTCGTTCCTCTTTTTGTTCGTTTTTCATTTTTTTCCTGCCGC GCTGGCAGGAAACAGCACTTTTCAGATACCGATTAGAGGAGCTCTCGCCG CAGGGGATGGGAAAGTTCATCTCCCAGCACGACCTATCGTTCGAAGTCGT CGACCCCGAACGGAAAGCCGCCATCAGGTGACGAGTAACAGATCAGACAG TCGGGTCGATTAATCACACCGGGTATCACTCGATGAACGCACTTTGTCGA TGTTGCACTTATGTAGATATATTTTCAAGTCATTGACGAGTCAGGTGTCA GCTCTGTGTTGTTGTATATTACTGTAGTTGATTTTTGCAGGGTGCATTGT TCGCCCCGGGTGATGGACGTTCTTGAGGTACGGTTTGGTCGGAAACCGAA TAACTACCCCGTCCTGTCGAAAACATCCGTCTAAATAATTATTGACTGAT CTCGACGACATACTTCCGAACAAAATAATTTTTTCACGAATCCAACGACA AATCAGTCGTTTGAAACGACTATTTGTGGCCTCTTGACCTCAACAGAAAA CCAAGCTCCTGGTCTGTCTCCCTGGTCCTCCCTATAGGTCATGTATGTGC ATGGCGTCCTACGTTGCAGCAGATCTCTTCTTCAGCTTGACTTGCCGCTG TCGGGGGTCGAGATTTGTTCGGTGCCGAAGGGTACCAGCGACCAATTAGT TGCCTCGCACGACTATTTAGTCGTTTGTGTCGGGAGTACCGTGGTGTTGG AGGAAATCAAAGTTTGTGAAGTGGTATGTTAACGTAAGGTAATTTTGAAT ATTACTGTTGATCAAGAGGTGTGCTCTTCTGGTCGCTTCTTCCTTCTGTA AGCGCGTAACTTGATCTTCTCACGAATATTGACATGAAGAACGAAATACA CGGATCGAGTCAAGAATTGGCTAATGCTCTATGGGAAGATTCAAGATTCC TTGTGGGACAGTACTTGAGTATCATCGATATGGAAAATGACCTCCCAATG TTGATAAGAGACGGCCATTTCAACTATACTGATGAGCAAGCAGTATAGGG ATGAATGAATATGTCATCAGCGCGCACAAGTACGACTCCCGAAATCCCGA AATCCGGCCAAGCAGGTCTAAGCTACAGAGCGTGCACGGTACGGCATTGC TCAACGTGGACAAAACGACGTACTACAAGATTCCCTTCTGGCAGGCGGTG GATCTTGTCGGCACCCGTCAGGTGAAGCAAAATCATAATGTCCAGTAGAC ATACTTTTTCGTCCGATTACTCAGACCCGTGGTCAAAGACTGGACGTGAC GGAATAGAAAATGCAACAGTGACACCATATAGTCCAAATATGTGTACTTT GTTGGTCTTCTTGTCCTACGATAGATGGTACCCCCCTTTTGTAAAAACCC ATAAAAAAGGTATACCTTTATTGGTTTCATCCAGGACAGACGGTATCTCG GTTTTCGCCCTAAGGTTTCCTGTTTTTGTGGCAAAAATCGATTGCTTCTA TGAAAAAAGAGGACAGATCTAATAATATCAAACACCTGTCGGAAACGAGC AAAAATACAGAAGAAACGACGCGGTCAAAACTTTTTGGTAGCCACTCTCA GGATGGTGTTGTACTAACAATGTCATGCTCCAATCGTGCCTGCCCTAGTA AGACGACTCAGTACCTCTGGATTTCGTACAATGGATGGCAAGGTGATTAA GGTAACCTGCAAGGAGTGTACTGATTGTCTGATGACACTGGTTCACAGGT TACGAAGTCTGCGGTTTACTCATGTCACCTGTTCACCCTTGTTTTCGTCG ATCTCTACATTCCCAAATTCAGCGGATGCGTCGATCGCCTGATCGGCGTT CTAGACTATACATCAAAAATGTGTTTTTCAACGAAGTAAAGAGGCCATTC GTCTGTCGCTTATTTTGCTGACGTAGCTAGCCTCCACTGCAACATGTATT TTGTTGCCCCCCTCGAGTTAGTTTTGAAACAAAATGCAACAGGGTCGTCA ACACCCTTTGGTACTATGTCCCAGATACAATTTTGTCGAGAAGCAAGCGC CTGCACTGCCGAAACGTCAGGTCTATCGAAAGATCTCAACAAGATCTTTC CAAAGAAAATACTATTGTCATTATTCACTGAACATGGGTAGTTATACGAA AAAATCGAGCGTGGAAAAATACTACCAGAAGGTGCTATACCAAAGGGTGA TTACGGTAAACTATAAACAAGATAATGGTGAACACTAATGCATGGATAAA TGATGATGAAACACCAATATTCTTTGGTTAAACGTCTGATCGAGAAAGAA ATTGAAATTTGAAGCGAGGTTATCGATTGTTCCCGGTTATTTTGTTGGCA GGTGTACCTGGAGGCAGGGTTCGCGTATGTGCCTGTGCAGAGGGTCGTGA CCATTGTTGTGGCTCGTTTCCGCATGGGTATATCCCGCTCGCTGATAGAA GCGTCGAACCATTTTGCCTTCGTCACCTCGGACTCGAGATTCGGACCGTT GCTGCAGGTGAAAAAATGGATAAAAAAATGCACGATTGTATAACGTGAAC ATCATCCTCTGCGAGCTTTCATGTATAGTACTGAATGTTTACACACCCTT GTTAAACTTTTTTTTTTTTTCAAGAGCCATTGAAATATGAGGAGGGTGAA GATGGTATTTATTTTTTTTTGTTACAGTTTTTTTTTTTTTTTGATTTCTA CCTTTTTCATGTATTACAAGTTTTTATTTGGTTTTTTAATTGGTTTTATT TGATATCGTGTCAAACTATAGGGTGTCGTCGTCGTCGTCGTCGTCGTCGT CGTCGTCCTTGTCCTTGTTGCTGTTATCTAGTGCTACTGTTTTTGTTAGT ATATCATTTGTTGTGCTTTTGCTTGCGCTGACAACTAGGCGCGCGCGCAG ACAAGACAACTTAGACAAGAAAACAACAAGTTTCTAGTGATGTCAGGTCT AGCGATCCACACCGGCTGGGGAGCATGTCGGTTGAGTATAGCGTTCGAAA TGTTGAGACTATCGTACGTCATCCCAAAAAAAGGCCGTTGCCAGAATAAT CTGCATCTCCCCATTCACTAAGTTGAAGTACCTAGAGTAGTTCACCTGAA ACGAACGGCCGTTGTTCGAAATTCCATGTTTTGGGATCGTCGCCTCCGCA CGTACACTATACACTATAGGTACCCAGAACATAACAGCGCGCTGCGGCAG TACTCAAGTCGGCCATAGCAGCGATTGAACGCGCTCTGTGACGTATCGCA AGAAATCTCGAATCCCACATTGTCTCGTGAAAACGTGCTGCTTCGCGGTC CCTCCAAGACTAATTTCCAAGGGTTTGGAGGGAGTGGGCGGGAGGATTTT TGGCCTAGTGATGGCCGCCACGGTGCGCACCGAGCAGGCACCGAAACGAA TAAGGGGGTCTTGGAACAAACGATTTATGTCAAAGTGAAGCTCACCGCAG GTTTGACAGCGTTTTGGTTTGTGTAGCGTAGTGTAGCGTAGTGTAGCGTA GCGCCAGAAATGTTGGAATAGGTGGTTGCGAGGTGTGGTCGACAGACAGC AATAATTTTGTAAGAATAGTGATGTCTCGCTTCGCTCGGTTTTATTTCTG TGACGAGCGCTCTCTCGCTGGTGCCTGCTCTTGTGCTGATCTTGGGGCTT GCAGAACATGAGCAAGCAATACCTCGGCCGGGACTTCGGCAACGCGGACG GGGCTGACGCGGACAAGATCACCCCCGGCATGCTGAACACCCTCGCGGAG GTTGGTGGATATGGGTTCGGCTGGGGCTGCTGTTGCTATTTTTTCTATGA AGGATGTTCTCCACGTTGTCGGAATTTCTAAATACCCCGTTATATACATA TTCATGATCGTCCCGTTATACTGTTGCACCCGTTAATTTACAGCTTTGTT TCGCGGCCTCTAAGGTGCAGCAGTGTGTGTGTGTGTGTGTGTGTTTATGT GTTTACGTGTCTTCGTTTACGACAAACCCCGTTCGTACGGTTTCGCTGTC AGATTGTGCCGTTACATTGTCAGCACTACACGTGGAAACACTAAACAGGG TTCAAGAACTGCGGTGTGTGATTTATAGTGCCGTATTGTTCAACATCTCG TCTCCAATAAGTACGTTACTCTGCTAAAGCTACTTTGTTACTCTCGTTGC ACATGCGCTGCTCTATTACACTGGTATTCCCTTACTCCGTCACAGCGATC GATGCCACTCTGCATGCGACAGCTCCACACGGTGTTGAATCGCGAGCACA AGCTGAAGCACTGGGGGCGATTGCAATACGGCCTCTTTCTCAAGGGAGCC GGGCTGGGAGTGGATGACGCCATGGCTTTCTGGCAGGTAAACATTGGACC ATTCCCGATCTAAAGCAACGATTTTTTATTGTTTTTTTTTTAAATTGTTT AATGAAATCAAATATCTCATGTTATTAGAAAAATAGAGCTGAAAGAACAA CGAAAGCACTCCAAAAAAGTGTTAATATCATAGCAAGGGTTTATTTTATT ATTATTTTTTTGTCCTCTTCTTCCTTTTTTTCGTATTAAAATGTCTTGTG CAGTCTCTCTTTAAAAAAATAAATATTGGACGGACGAACAAAGCGCTGGT CCAAAAGTGATTGCTGCATGATAAGCTTTTTTTTTTTTTTTTCCTTTCCT TGCTTGCAACCTGAAATTTCCTGTGAAATTGATTGTTAAACAGGAGTAAT TGAGTGAAGATAAAGCCTTCGCGCGTCCTTCAAAATGTCAGCTTTTTTTT TTTTTATCCATGACTGATATGACATTTCAAGATTTCACATGGTTGCTACA ACACGCGACCAGAAGCAGAACTAGATAGCGATCGGTTCGGTTCTGTCGAA GTCAAGCCGATCGGCACTTGTTTCTCTCAGATGTTGCCTGCCTGGTCACG TGAAAAGGCCTTGAAAATATTCTTGTTACACACCACGTTTATTTTTTATT TTTTTCCCATCTGTTCCTTTTTAATAATAATAAAAAAAAAAACGGAACCG TTCGCCTTTCCTGCGTTTGATGTACGTCCCTGTCCCCATTCATTAATCAT TTTTTTTTCCCCTCTCGATTTTACTTTTCCTTCGTTCAGACTCAATTCAC GAAGATCATGGGCCTCGATCAGTTCCAGAAGCAGTACGCGTACAACGTTC GACACATGTACGGGAAGGAGGGCAAACGCACAAACTACACCCCCTACAGG TAGCGAACGTAGTGGTGATCCCTTCGGCTGTGTCGTTGTATGTGTATGCC TCTTGTTACCGAGACAAGGGCGGCGGCGTGTTCGCCTTGCTTGCTTTCAA GAACACCCGGGTTTTTTTTAACGCCGTAGAAAATGTTCGCTTCTTGTGGC AGAAAAGGGGGCAGCCCACTTTGTAGGACGAGATGGCAACATATAGATCT GCATAGTTAAAAAAACAAACAAACGATTGTTATGGTGACGTTCGCTAACC CTGTTTCAATTTTCCGAGTCTCGTGCTGCTGCGGCATACTACATATTTAT TCATGTTTCGAACTTGCTGATGGTGTAGCTGAGGCCATCTTGCCCACCTG CCTGCCGAGTACATCCGATACGTCCTGTTCAGTGCTGTACTCAGTGACGT TGTAGTAGTTCAATTTGGACAGAGTTTTATGTACACGGTGTATTGTTGAT CTTGCACACACCTTTAGCTGGTTTGAAATGTTCTCGAAATAGACAGGCTC GGATACTCAATGGAGTAATTATTTATCTGCGACGAGTTTTGGCGTGTATA AAATAATCTCACTCTAATTTTTTCAGCTTGTGGGTAAAAAAAAATCGATC AGCTTCACGATACCTCCATTTTTTGTTTTTCCGTTGTTGTCGTGTATTTT ATAGTAACTTGAGCATATCTGCCTGTACCTTTTTTTCGCCTTACTTCATG GTATATACCTCCCACTTGTTTGGTCAATTTTTGGATAAGTAAAATCGCTC CCCCCTCATCCTGCGTCATGACACGCTCTTTTTACAAGTTGCCTCAAGAT CATCATGGGGAATCCTCCAGGTGCCGGTGACCACCACGGATGCCCATACC GACACTACGACGAGGATCACCTCTCTAGCCTTCTCTCACAGGTGAATCTA ATTACTGACTGGAGTGCTGTTGTAAGCAGAAAATAGGATGCTGATCGAGC AACGCTGCAAATATTAGTAGGGTCTGATTATTATGTTGGTGCTACGGTAC GTCACCACCCCAGCGGTGAAGATTCGAGGTATTCATGTTGACTCGTCCAA AATCATATCTATCTATCTATCTATATACATCTATATATATATGTATGATA TCAAAGCATAACACTATTCAGCTGACATGTGATAGAATCATAAGTGGCAG TTAACCTGGAACTACCTTTTTTTTTTTCTTTTTTTTTTTTGCAAAAAAAT CTTTACCGATGCTTCCATACTTCCGTATTTCTACCAAAGTATTTCTACAT TTCCTTTAACAGAACAGATTTATCTATTCCCCTCTGCGGGCTAGGCGCCA CCCCGGTTCGGCCGAACCAAGTAGGCAGTGTGGGGGTTGCACCAACTAAA AGACAGACCTCTGACTAGACTTCCAGTCATGCTCAGTTCACGAGCTACCC TACCCGTTCGGGCGTAGGTCCGTGCATCCTCTGGGTTTTTCAACTTTAGG GCCCTAGAGTTTATACCCAATATCCGAGTCTGTACGCATGGTTAGAAGGC AGCCATTTTGTACTCACTCTCGACACTAGTGAACAGGTGAAATATCGCAA CTATTCCCGTTTTAATTGGTGAAATATGTACCGATTGTATTCTATATCAT TCCCCCCCCCCGTCCCGGACGAACAGTATAAATTATTTGCCGGGAGGTTC AGCGTGAGTAACGGTTTATTCTGTTTGCCAGCACATTCAGAAATTAAGGC GAATATTTTATATTGTATGATGTTGGAAGCTCTGATTAAAGCTCACGATT ACATGTACTAAATAAATGCACGAACGTCGATTAAGTACCACCGCCAAGGA TCTTACTAATAGCTCACCACTACTGTCTTATCTTACAGGCAACAATAAAA ACACAGGCATACGCTGTGCGTGATGCGGCGGGTTGACGCTCGTAAAAAAA ATCAGAACTTCCAGCGGACGTTGAGTTGTTCTGTCCCCTGTCCCCTGTCC CCTGTCGGAAAACAATCACATTTCTCTTCTTGCGGTCCTTACTCTAATCT TTACATGTTAATATATATATATATATATATATTCCTTTAAAATATTGCCG TTGGATCTTATCTCCCACGCGCTTTTGTTCCCTCTTCTCTTTTTGTATTT TTTTTTTGCCGTTCAATGGTTGATAAAAATTCAGGTTCGTATAGCTGGAG CGGACAAGGACGCCGTGCTTCGGCAAGTGAAGTCTAAAAACTACCAGCTA GCCTGCCAAAGGCACTTCGAGGCCACGCATAAGGGTCATGAGACAGCGGG AATCAGCACCGACGGAGTAGGGAATCACCCCAATGCTTGGATGCACGCCT CCATGGAATTTCACAAGGCCAAGGTAGGTAGCCGGACTCCCTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig9572:399..9392-

>mRNA_H-paniculata_contig9572.17282.1 ID=mRNA_H-paniculata_contig9572.17282.1|Name=mRNA_H-paniculata_contig9572.17282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2658bp|location=Sequence derived from alignment at H-paniculata_contig9572:399..9392- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTATACGGAGGCCCCATTCGAGGAGATAACCCTTGACGAGTTCGAGCT
CATGGCCTTGGACAGGCTACAGGTCTTGCGCAAGATAGAAGACTTGAAGA
TGTATACGGAGGCCCCATTCGAGGAGATAACCCTTGACGAGTTCGAGCTC
ATGGCCTTGGACAGGCTACAGGTCTTGCGCAAGATAGAAGACTTGAAGGC
GCGCAACGTGCGAGGCGATGACTACAAGCGGTCGCTGCGAGAGTCTCTGC
ACAAGTATATGAAGATCAGTACGCTCAGCGACGACAGCGCCCGCGCCGAC
ATGCGCAAGGACAAAATCTCCCACTTCATCCTCAGGCTGGCCTACTGTCG
CAGCGAGGATCTTCGCCGATGGTTCCTCACACAGGCGCGCAACGTGCGAG
GCGATGACTACAAGCGGTCGCTGCGAGAGTCTCTGCACAAGTATATGAAG
ATCAGTACGCTCAGCGACGACAGCGCCCGCGCCGACATGCGCAAGGACAA
AATCTCCCACTTCATCCTCAGGCTGGCCTACTGTCGCAGCGAGGATCTTC
GCCGATGGTTCCTCACACAGGAAACAGCACTTTTCAGATACCGATTAGAG
GAGCTCTCGCCGCAGGGGATGGGAAAGTTCATCTCCCAGCACGACCTATC
GTTCGAAGTCGTCGACCCCGAACGGAAAGCCGCCATCAGGAAACAGCACT
TTTCAGATACCGATTAGAGGAGCTCTCGCCGCAGGGGATGGGAAAGTTCA
TCTCCCAGCACGACCTATCGTTCGAAGTCGTCGACCCCGAACGGAAAGCC
GCCATCAGCAGGTCTAAGCTACAGAGCGTGCACGGTACGGCATTGCTCAA
CGTGGACAAAACGACGTACTACAAGATTCCCTTCTGGCAGGCGGTGGATC
TTGTCGGCACCCGTCAGCAGGTCTAAGCTACAGAGCGTGCACGGTACGGC
ATTGCTCAACGTGGACAAAACGACGTACTACAAGATTCCCTTCTGGCAGG
CGGTGGATCTTGTCGGCACCCGTCAGGTGTACCTGGAGGCAGGGTTCGCG
TATGTGCCTGTGCAGAGGGTCGTGACCATTGTTGTGGCTCGTTTCCGCAT
GGGTATATCCCGCTCGCTGATAGAAGCGTCGAACCATTTTGCCTTCGTCA
CCTCGGACTCGAGATTCGGACCGTTGCTGCAGGTGTACCTGGAGGCAGGG
TTCGCGTATGTGCCTGTGCAGAGGGTCGTGACCATTGTTGTGGCTCGTTT
CCGCATGGGTATATCCCGCTCGCTGATAGAAGCGTCGAACCATTTTGCCT
TCGTCACCTCGGACTCGAGATTCGGACCGTTGCTGCAGAACATGAGCAAG
CAATACCTCGGCCGGGACTTCGGCAACGCGGACGGGGCTGACGCGGACAA
GATCACCCCCGGCATGCTGAACACCCTCGCGGAGAACATGAGCAAGCAAT
ACCTCGGCCGGGACTTCGGCAACGCGGACGGGGCTGACGCGGACAAGATC
ACCCCCGGCATGCTGAACACCCTCGCGGAGCGATCGATGCCACTCTGCAT
GCGACAGCTCCACACGGTGTTGAATCGCGAGCACAAGCTGAAGCACTGGG
GGCGATTGCAATACGGCCTCTTTCTCAAGGGAGCCGGGCTGGGAGTGGAT
GACGCCATGGCTTTCTGGCAGCGATCGATGCCACTCTGCATGCGACAGCT
CCACACGGTGTTGAATCGCGAGCACAAGCTGAAGCACTGGGGGCGATTGC
AATACGGCCTCTTTCTCAAGGGAGCCGGGCTGGGAGTGGATGACGCCATG
GCTTTCTGGCAGACTCAATTCACGAAGATCATGGGCCTCGATCAGTTCCA
GAAGCAGTACGCGTACAACGTTCGACACATGTACGGGAAGGAGGGCAAAC
GCACAAACTACACCCCCTACAGACTCAATTCACGAAGATCATGGGCCTCG
ATCAGTTCCAGAAGCAGTACGCGTACAACGTTCGACACATGTACGGGAAG
GAGGGCAAACGCACAAACTACACCCCCTACAGTTGCCTCAAGATCATCAT
GGGGAATCCTCCAGGTGCCGGTGACCACCACGGATGCCCATACCGACACT
ACGACGAGGATCACCTCTCTAGCCTTCTCTCACAGTTGCCTCAAGATCAT
CATGGGGAATCCTCCAGGTGCCGGTGACCACCACGGATGCCCATACCGAC
ACTACGACGAGGATCACCTCTCTAGCCTTCTCTCACAGGTTCGTATAGCT
GGAGCGGACAAGGACGCCGTGCTTCGGCAAGTGAAGTCTAAAAACTACCA
GCTAGCCTGCCAAAGGCACTTCGAGGCCACGCATAAGGGTCATGAGACAG
CGGGAATCAGCACCGACGGAGTAGGGAATCACCCCAATGCTTGGATGCAC
GCCTCCATGGAATTTCACAAGGCCAAGGTAGGTAGCCGGACTCCCTGAGT
TCGTATAGCTGGAGCGGACAAGGACGCCGTGCTTCGGCAAGTGAAGTCTA
AAAACTACCAGCTAGCCTGCCAAAGGCACTTCGAGGCCACGCATAAGGGT
CATGAGACAGCGGGAATCAGCACCGACGGAGTAGGGAATCACCCCAATGC
TTGGATGCACGCCTCCATGGAATTTCACAAGGCCAAGGTAGGTAGCCGGA
CTCCCTGA
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