prot_H-paniculata_contig957.17281.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig957.17281.1
Unique Nameprot_H-paniculata_contig957.17281.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length369
Homology
BLAST of mRNA_H-paniculata_contig957.17281.1 vs. uniprot
Match: D8LI57_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI57_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 1.750e-41
Identity = 182/398 (45.73%), Postives = 213/398 (53.52%), Query Frame = 0
Query:    1 MFQDPGECHTFKLPDKEQNQWLRRANRAAA------------------------HYHSTANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSPPSGLVPXXXXXXXXXSAREGKRSRLVSPRRSKSERSKSPKRKEGIQASP-------------RRREALKRLVYMVRRKGGSGAVGGKRSRGVGGGDASSSLSMFRLLHVDIFQVPPGNHLHRMDHIVGIEGGRAQARVQQLTSQKGETGGFTFVFVVNIQLPRTFTKKSWAASVVLYWGIPEEALAGSLSSTDEKEQDHTSPSPSPPLHTXXXXXXXXXXXXXXQHPHSPVSTQILADAALANESMMMMPPFERELLQRYIDLPFNRLSGAICTGSSASGFVTNDPTA 361
            MF+DPGECH  ++P  E NQWLRRANRA+A                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXX               PV+PP  +                  +R+VSPR   S   K      G  +S              RRREALKR V +V+RKGGS     KR             S F+LLHVD+FQVPPGNHLHR+DHIVG  GGRAQARV+ LTSQ G   GF F+FVVN+QLPR+FTK + AASVVLYWG+P E L G+ +S      D +  +P P    XXXXXXXXXXXXXX               A           FER+LL RYIDLPF+R+      GS+ SGFV+++  A
Sbjct:  750 MFRDPGECHALRVPKHEHNQWLRRANRASATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADVSGNGAGTSPTFPVTPPGTVTG----------------ARVVSPRGDYSANGKHA----GTPSSXXXXXXXXXXXXXXRRREALKRFVSLVKRKGGS-----KRGH-------RPYASGFKLLHVDVFQVPPGNHLHRVDHIVGRAGGRAQARVKDLTSQPG---GFKFLFVVNLQLPRSFTKNTSAASVVLYWGVPAECLGGAGASP----LDFSRCTPPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA----------FERDLLMRYIDLPFHRM------GSNGSGFVSHEQAA 1092          
BLAST of mRNA_H-paniculata_contig957.17281.1 vs. uniprot
Match: A0A6H5JPN1_9PHAE (CRAL-TRIO domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN1_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.370e-20
Identity = 104/242 (42.98%), Postives = 128/242 (52.89%), Query Frame = 0
Query:  122 SKSPKRKEGIQASPRRREALKRLVYMVRRKGGSGAVGGKRSRGVGGGDASSSLSMFRLLHVDIFQVPPGNHLHRMDHIVGIEGGRAQARV--QQLTSQKGETGGFTFVFVVNIQLPRTFTKKSWAASVVLYWGIPEEALAGSLSSTDEKEQDHTSPSPSPPLHTXXXXXXXXXXXXXXQHPHSPVSTQILADAALANESMMMMPPFERELLQRYIDLPFNRLSGAICTGSSASGFVTNDPTA 361
            S S KRK+G  +SPRRREALKR V +V+RKGGS     KR             S F+LLHVD+  +P               G RA        +T    + GGF F+FVVN+QLPR+FTK + AASVVLYWG+P E L G+  S      D +  SP P    XXXXXXXXXXXXXX               A+           ER+LL RYIDLPF+R+      GS+ SGFV+++  A
Sbjct:  787 SSSAKRKDGA-SSPRRREALKRFVSLVKRKGGS-----KRGN-------RPYASGFKLLHVDVANLP-------------YSGARAVLSFFGDAVTIFVSQPGGFKFLFVVNLQLPRSFTKNTSAASVVLYWGVPAECLGGAGVSP----LDFSRCSPPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLPLAVV----------ERDLLMRYIDLPFHRM------GSNGSGFVSHEQAA 982          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig957.17281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI57_ECTSI1.750e-4145.73CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JPN1_9PHAE1.370e-2042.98CRAL-TRIO domain-containing protein (Fragment) n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig957contigH-paniculata_contig957:4719..15415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig957.17281.1mRNA_H-paniculata_contig957.17281.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig957 593..15415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig957.17281.1 ID=prot_H-paniculata_contig957.17281.1|Name=mRNA_H-paniculata_contig957.17281.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=369bp
MFQDPGECHTFKLPDKEQNQWLRRANRAAAHYHSTANTTANSSVSTSTSM
SLSSSSSRRTTLASNNSGSSLGSHLSEGLGEVPVSPPSGLVPGSASASAS
PSAREGKRSRLVSPRRSKSERSKSPKRKEGIQASPRRREALKRLVYMVRR
KGGSGAVGGKRSRGVGGGDASSSLSMFRLLHVDIFQVPPGNHLHRMDHIV
GIEGGRAQARVQQLTSQKGETGGFTFVFVVNIQLPRTFTKKSWAASVVLY
WGIPEEALAGSLSSTDEKEQDHTSPSPSPPLHTPPPPTSPPPSQLPPQHP
HSPVSTQILADAALANESMMMMPPFERELLQRYIDLPFNRLSGAICTGSS
ASGFVTNDPTAHGTASGKA
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