Homology
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match:
A0A6H5KFS2_9PHAE (DNA topoisomerase 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFS2_9PHAE)
HSP 1 Score: 803 bits (2073), Expect = 1.900e-273
Identity = 399/496 (80.44%), Postives = 437/496 (88.10%), Query Frame = 1
Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAK---AKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAIEKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479
P++ + GR+ELSFYTVPEY WK+ + NGKGW+AKYYKGLGTST+KEAKEYFAALDTHQLEFEW+ D +D DLIDMAFSKKRVEDRK+WLR FKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNL+KEIKVVQLAGYVSEHSAYHHGEASLNGTI AMAQN+TGSNNLNLL PGGQFGTRLMGGKDAASPRYIF+ LEK ARA+FHPDDDALL YLDDDGLSIEPEFY+P++PLILVNGSDGIGTGWSS VPNYSP DVIENL+RRIKG FVEMQPWY GFAGSI AK KKG +G Y+ GIVNR+DDTTVEI ELPVR WTQ+YKQFLESLLPGAEDAK AKG KS +R I+DFKENHTDTTVHFTVTM EDLDA++KG+GLYKFFKLESSV+T+NMVLFDQDG L +Y++PQHIMEEF TLR ++Y RRK SL+ K+Q+EWSKLDNKV
Sbjct: 516 PIVKVSKGRNELSFYTVPEYTVWKEGHANGKGWNAKYYKGLGTSTAKEAKEYFAALDTHQLEFEWQDDHRDDDLIDMAFSKKRVEDRKEWLRGFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLRKEIKVVQLAGYVSEHSAYHHGEASLNGTITAMAQNFTGSNNLNLLTPGGQFGTRLMGGKDAASPRYIFTALEKAARAVFHPDDDALLTYLDDDGLSIEPEFYMPIIPLILVNGSDGIGTGWSSNVPNYSPHDVIENLKRRIKGDQFVEMQPWYKGFAGSIEAKVGKKGFEGSYTVRGIVNRVDDTTVEITELPVRKWTQDYKQFLESLLPGAEDAKSKDAKGNXXXXXXXXXXXXXXKSPTRCIKDFKENHTDTTVHFTVTMSMEDLDALDKGDGLYKFFKLESSVSTNNMVLFDQDGHLERYESPQHIMEEFITLRSEFYDRRKTSLLNKLQSEWSKLDNKV 1011
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match:
A0A835YRC0_9STRA (DNA topoisomerase 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC0_9STRA)
HSP 1 Score: 620 bits (1598), Expect = 1.280e-209
Identity = 311/485 (64.12%), Postives = 372/485 (76.70%), Query Frame = 1
Query: 31 ELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGG-YSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAIEKGEG-LYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479
ELSF+TVPEY W+ + +GWS KYYKGLGTST+KEAKEYFA LD HQ+ FEW+ D D D++D+ F+KKR EDRK+WLR F GT DY V+++TY++F N+ELILFS+EDNKRS+PC+VDG KPSQRKVLF+CFKR LK EIKV QLAGYVSEHSAYHHGE SL GTI AMAQ+Y GSNN+ LL PGGQFGTRLMGGKD ASPRYIF+RL+KVARA+FHPDDDA+L YLDDDG+SIEP +YVPV+PL+LVNG++GIGTGWSS VPNYSPRDV+ENLRRRI+GQ VEMQPWY GF G+I K G G ++ GIV R D T+EI ELPV+ WTQ+YK FLES P KA AK +I+DF+ENHTDTTVHFT+TM DLDAIE+ G L KFFKLE+++ +NM LFD G + +Y++P IMEEF+ LR+ +Y RK L+ +MQ EW +LDNKV
Sbjct: 521 ELSFFTVPEYETWRAAHAQQRGWSIKYYKGLGTSTAKEAKEYFAKLDQHQIPFEWRDDAADGDMVDLVFNKKRAEDRKEWLRNFVPGTFVDYGVDAMTYDAFFNRELILFSIEDNKRSLPCMVDGLKPSQRKVLFACFKRKLKNEIKVAQLAGYVSEHSAYHHGEVSLTGTITAMAQSYCGSNNVALLYPGGQFGTRLMGGKDQASPRYIFTRLDKVARAIFHPDDDAILTYLDDDGMSIEPAYYVPVLPLVLVNGAEGIGTGWSSGVPNYSPRDVMENLRRRIRGQPMVEMQPWYRGFVGTIARKAG--GAKGSSFTVEGIVERTGDETLEITELPVKKWTQDYKAFLES------------PTKAAAK----------PRFHIKDFRENHTDTTVHFTITMDKSDLDAIEQQPGGLSKFFKLETTLAETNMTLFDNTGMIARYESPLQIMEEFYDLRLRHYGMRKEHLLARMQKEWMRLDNKV 981
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match:
A0A7S3XNX1_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNX1_HETAK)
HSP 1 Score: 574 bits (1479), Expect = 1.230e-196
Identity = 297/497 (59.76%), Postives = 364/497 (73.24%), Query Frame = 1
Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSIT--AKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAI--EKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479
P++ G+ +F+T+PEY WK+ N+GKGW+ KYYKGLGTS+SKEAKEYF+ L+TH+L+FEW+ + D DLIDMAFSKKRV DRK WL+ F+ GT +Y +++TYE+FINKEL+LFS+ DN RSIP ++DGFKPSQRKVLF+CFKR LK EIKV QLAGYVSEH+AYHHGEASLN TI+ MAQN+ GSNN+NLL P GQFGTRLMGGKDAASPRYIF+RLE VAR +FHPDDD LL +LDDDG SIEP+ Y+PV+P++LVNG+DGIGTGWSS VP Y PRDVI NLRR +K + M PW++GFAG + AKT G Y GI+ +DD+T+ I ELPVR WTQ+YK FLESLLPG A A G I+ FKENHTDTTV FTV + L+ + E G GL K FK+E SV+TSNM LF+++G + Y TP+ IME F+ R+ Y RK L+ K+ E+ KLDNKV
Sbjct: 107 PIVKCTKGKRTETFFTIPEYQRWKEATNDGKGWTIKYYKGLGTSSSKEAKEYFSDLNTHRLDFEWQDEAIDGDLIDMAFSKKRVNDRKTWLKEFEQGTSINYGSDAMTYENFINKELVLFSLADNMRSIPHVMDGFKPSQRKVLFACFKRKLKAEIKVAQLAGYVSEHAAYHHGEASLNSTIVGMAQNFVGSNNVNLLFPSGQFGTRLMGGKDAASPRYIFTRLEAVARLIFHPDDDPLLNFLDDDGQSIEPDHYLPVLPMVLVNGADGIGTGWSSSVPTYDPRDVIANLRRLVKCEAMEPMHPWFNGFAGELVPNAKTP-----GSYKVKGILEVVDDSTILISELPVRKWTQDYKVFLESLLPGGTGAGADG--------------------IIKGFKENHTDTTVAFTVNLDPTVLNRLRLEPG-GLEKKFKIEGSVSTSNMTLFNKEGMIETYATPEAIMEVFYEARIQGYEDRKNYLVDKLNKEFRKLDNKV 577
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match:
A0A7S3XY17_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY17_HETAK)
HSP 1 Score: 561 bits (1447), Expect = 3.140e-193
Identity = 285/494 (57.69%), Postives = 362/494 (73.28%), Query Frame = 1
Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAIEKGEG-LYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479
P++ G+ E FYT+PEY WK N++G+GW+ KYYKGLGTS +KEA++YF+ L+TH+LEFEWK +E D + I++AF+KKRV+DRK+WL ++ G+ DY VE+V +++FI KEL+LFS+ DN RSIP +VDGFKPSQRKVLF+CFKR L +EIKV QLAGY+SEHSAYHHGE SL GTII MAQN+ GSNN+NLL P GQFGTR+MGGKD+ASPRY+F+RLEK+ARA+FH DDD LL YLDDDG SIEPE+YVPV+P++LVNGSDGIGTGWSS VP Y+PRD+IENL+RRI G+ ++PWY GF G K +K G Y +G ++D T+ I ELPVR WTQNYKQFLE L EK+ + DF ENHTDTTV FTVT L+ E G L+KFFKLES+V SNM LF+++ ++ KYD+ +ME FF LR+++Y RRKA ++ M+ ++ LDNKV
Sbjct: 39 PIVKCRKGKREKIFYTLPEYEQWKRENDDGRGWNIKYYKGLGTSNAKEARDYFSDLNTHRLEFEWKGEE-DGEAIELAFAKKRVDDRKEWLLEYEKGSVMDYTVETVPFDTFIRKELVLFSLADNVRSIPGVVDGFKPSQRKVLFACFKRGLTQEIKVAQLAGYISEHSAYHHGEMSLTGTIIGMAQNFVGSNNINLLFPSGQFGTRIMGGKDSASPRYVFTRLEKIARAIFHKDDDPLLTYLDDDGKSIEPEYYVPVLPMVLVNGSDGIGTGWSSSVPCYNPRDIIENLKRRINGEPMKPLKPWYRGFNG----KVAKGKGPGKYVTVGTAKVLNDKTIHITELPVRVWTQNYKQFLEDKL----------------------RTEKNPQGTVLDFIENHTDTTVDFTVTFTDGALEDAENAPGGLHKFFKLESAVGCSNMHLFNEESKILKYDSVLDVMEAFFHLRLEFYRRRKAHMLASMELDFRVLDNKV 505
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match:
W7TC60_9STRA (DNA topoisomerase 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TC60_9STRA)
HSP 1 Score: 583 bits (1504), Expect = 3.320e-191
Identity = 284/489 (58.08%), Postives = 372/489 (76.07%), Query Frame = 1
Query: 16 GSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTM-HTEDLDAIEKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479
GS R++ +FYT+PEY WK+ N GW+ KYYKGLGTST++EAKEYF+ L TH+++F W +D+ D D+IDMAF+KKRVEDRK+WLR F GT+ DY VES++Y++F+N+ELILFSM DN+RSIP L+DG KP+QRKVLF+CFKRNLKKEIKV QLAGYVSEHSAYHHGEASLNGTI+ MAQN+ GSNN+ L P GQFGTR+MGGKDAASPRY+F+RLE+V RA+FHP+DD LL ++DG IEPE+Y PV+P +LVNG +GIGTGWSS VPNY+PRD++ N+RR ++G+ EM PWY GF G++ AK ++ G Y+ +G V R+DD TVE+ ELPV+ WTQ+YKQFLES+ GA D K GA +I+D KE HTDT+V+F +T+ T + + + L+K KLESS+TTSNM LFD +G + KY+TP ++ EF+ LR+ Y +R+A+L+ +++ EW ++DNKV
Sbjct: 594 GSKRAD-AFYTIPEYEQWKERTNEAAGWTIKYYKGLGTSTAQEAKEYFSDLSTHRIDFCW-ADDGDGDVIDMAFAKKRVEDRKEWLRGFSKGTYVDYKVESMSYDTFVNQELILFSMADNQRSIPHLMDGLKPAQRKVLFACFKRNLKKEIKVAQLAGYVSEHSAYHHGEASLNGTIVGMAQNFVGSNNIGFLYPSGQFGTRIMGGKDAASPRYVFTRLEEVTRALFHPEDDQLLPLQEEDGQVIEPEYYAPVIPTVLVNGGEGIGTGWSSTVPNYNPRDIMANIRRLLRGEEPEEMHPWYRGFTGTVEAKGGREA--GSYAVLGTVRRVDDVTVEVTELPVKKWTQDYKQFLESMTVGASDEK-------GA--------------FIKDLKERHTDTSVYFVITLSETAAPELLVDDQALFKRLKLESSITTSNMHLFDAEGHIVKYETPLAVLREFYPLRLSLYEKRRAALLQRLEREWRRMDNKV 1057
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match:
A0A1V9Z4P5_9STRA (DNA topoisomerase 2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4P5_9STRA)
HSP 1 Score: 562 bits (1449), Expect = 9.430e-184
Identity = 284/494 (57.49%), Postives = 366/494 (74.09%), Query Frame = 1
Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAIEKGEG-LYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479
P++ G LSFYT+PEY W+++ NNG+GW KYYKGLGTST+KEAKEYF+ L+ HQ+ F+++ D D I+MAFSKKR+EDRK+WLRAF GTH DY+V+++ Y F+NKELILFSM DN RSIP +VDGFKPSQRKVLFSCFKRNLKKEIKV QLAGYVSEHSAYHHGEASL+GTII MAQ++ GSNNL+LL+P GQFGTRL GGKDAAS RY+F++LE + R +FHP DD++L+YL+++GLSIEPE+Y+PV+PL LVNGSDGIGTGWSS +PNY+P D+I+N+R+RIK + MQPWY GF GSI +KG + G+ +D++T+ I ELPV+TWTQ+YK+ LE +L + I+DF+ENHTDTTV FT+TM L A++ G + K FKLE+S++TSNM LFD GQ+ Y +P I++EF+TLR+DYY RRK +++ ++ E L NK+
Sbjct: 574 PIIKATKGGRVLSFYTMPEYENWRNSTNNGRGWDIKYYKGLGTSTAKEAKEYFSDLNKHQIAFKYEGPV-DDDAIEMAFSKKRIEDRKEWLRAFVPGTHIDYDVQNMGYADFVNKELILFSMADNIRSIPSVVDGFKPSQRKVLFSCFKRNLKKEIKVAQLAGYVSEHSAYHHGEASLHGTIINMAQDFVGSNNLHLLSPNGQFGTRLKGGKDAASARYVFTKLETLTRMVFHPLDDSVLSYLEEEGLSIEPEWYMPVIPLALVNGSDGIGTGWSSSIPNYNPVDIIKNIRQRIKAEPMEAMQPWYRGFKGSIV----QKGSGDNFLVQGLFEVVDESTLVISELPVKTWTQSYKKILEKML---------------------------ETNKIKDFRENHTDTTVLFTITMEPAALAAVQNEVGGILKEFKLETSISTSNMHLFDAAGQIKHYRSPLEIIDEFYTLRIDYYGRRKVAILKRLDTEIMALSNKM 1035
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match:
K3X2K0_GLOUD (DNA topoisomerase 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2K0_GLOUD)
HSP 1 Score: 562 bits (1449), Expect = 2.950e-183
Identity = 287/490 (58.57%), Postives = 357/490 (72.86%), Query Frame = 1
Query: 16 GSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGG-YSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDL-DAIEKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479
G S++ FYT+PEY W++ NNG+GWS KYYKGLGTST++EAKEYF+ L THQ+ F + DE D D IDMAFSKKRVE+RKDWLR ++AGTH DY+V+ + Y F+NKELILFSM DN RSIP +VDGFKPSQRKVLF CFKRNLK EIKV QLAGYVSEHSAYHHGE SLNGTII MAQ++ GSNN++LL+P GQFGTRLMGGKDAASPRYIF+ LE+VAR +F P D+ +L YLDDDG SIEP+FYVP++P+ LVNGS+GIGTGWSS +PNY+P D+I+NLR+++ G+ + PWY GF+G I K+S K D + G+ D++T+ I ELPV+TWTQ YKQFLESLL S I+DF+ENHTD V FT+T + L D G+ K FKLE+S++TSNM LFD G + KY+ P I+EEF+ +R+DYY RRKA+L+ K++ + L NK
Sbjct: 650 GKNNSKV-FYTIPEYNAWREVTNNGRGWSIKYYKGLGTSTTQEAKEYFSDLKTHQVGFTYDGDE-DGDAIDMAFSKKRVEERKDWLRGYQAGTHVDYDVDDMAYSEFVNKELILFSMADNMRSIPSVVDGFKPSQRKVLFCCFKRNLKVEIKVAQLAGYVSEHSAYHHGEQSLNGTIINMAQDFVGSNNVHLLSPNGQFGTRLMGGKDAASPRYIFTNLEQVARRIFDPLDNDVLNYLDDDGQSIEPDFYVPIIPMALVNGSEGIGTGWSSSIPNYNPLDIIKNLRQKLNGEDLSPLVPWYRGFSGHIIEKSSGKPSDNQTFLVQGLYEIKDESTLVISELPVKTWTQTYKQFLESLL---------------------------ESGTIKDFRENHTDAKVLFTITFEPKTLSDICSAPGGVVKKFKLETSISTSNMHLFDSTGHIKKYENPHEILEEFYAIRLDYYGRRKAALLRKLEEQIKILSNKT 1110
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match:
A0A024G308_9STRA (DNA topoisomerase 2 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G308_9STRA)
HSP 1 Score: 557 bits (1435), Expect = 1.090e-181
Identity = 282/496 (56.85%), Postives = 362/496 (72.98%), Query Frame = 1
Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVE-MQPWYSGFAGSITAKTSKKGVDG-GYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDL-DAIEKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479
P++ GR + FYT+PEY W+ NNG+GW KYYKGLGTST++EAKEYF+ L THQ++F +K +E D D IDMAFSKKRVE+RKDWLR + GTH DYNV+ + Y F+NKELILFS DN RSIPCLVDGFKPSQRKVL+ CFKRNLK EIKV QLAGYVSEHS+YHHGEASL+GTII MAQ++TGSNN NLL+P GQFGTR++GGKDAASPRYIF++LE +A +F P+DD+LL +LD+DG IEPE+YVPV+P++LVNGS+GIGTGWSS +PNY+P D+IENLR RIKG+ + PWY GF GSI +++ + D + GI + D+T+ I ELPV+ WTQ YKQFLE+LL + I+DFKENHTD+ V FT++M E L + ++ G+ K FKLE+S++ SNM LFD DG++ KYD+P I+ F+ +R+ YY +RKA+++ K+ ++ L NKV
Sbjct: 615 PIVKCAKGRMKKVFYTMPEYEAWRLVTNNGQGWRIKYYKGLGTSTTEEAKEYFSDLPTHQIDFSYKGEE-DGDSIDMAFSKKRVEERKDWLRGYTPGTHVDYNVDDMPYSEFVNKELILFSRADNMRSIPCLVDGFKPSQRKVLYCCFKRNLKVEIKVAQLAGYVSEHSSYHHGEASLHGTIINMAQDFTGSNNTNLLSPNGQFGTRILGGKDAASPRYIFTKLESIAYKIFDPNDDSLLNFLDEDGQLIEPEWYVPVIPMVLVNGSEGIGTGWSSSIPNYNPLDLIENLRARIKGEEATRPLVPWYRGFTGSIEERSNARDGDSQAFIVRGIYHVTGDSTLVITELPVKVWTQTYKQFLETLL---------------------------ENETIKDFKENHTDSKVLFTISMTPEKLQEIVQSPGGIVKKFKLETSISASNMHLFDADGRIQKYDSPHAIINAFYGIRLAYYGKRKAAMLNKLTDQIQMLANKV 1082
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match:
A0A120E6S9_9BASI (DNA topoisomerase 2 n=2 Tax=unclassified Rhodotorula TaxID=2640191 RepID=A0A120E6S9_9BASI)
HSP 1 Score: 550 bits (1417), Expect = 3.460e-180
Identity = 271/493 (54.97%), Postives = 361/493 (73.23%), Query Frame = 1
Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAIEKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479
P++ + + ELSF+T+PEY WK ++G+GW KY+KGLGTS + +AK+YF+ +D H+L F+ + E D LIDMAF+KK+ +DRK+WLR F GT+ D++V+ V FINKELILFSM DN RSIP +VDGFKP QRKVLF CFKR LK EIKV QL+GY+SEHSAYHHG+ SL GTI+ +AQN+ GSNNLN+L+P GQFGTRL GGKDAAS RYIF+ + ++ RA+FH DDD +L YL+DDG SIEP +Y+PV+P++LVNG+DGIGTGWSS +PN++P D++ NLRR++ G+ M PWY GF G+I K K+ GY C G++ R+DD+TVEI ELP+RTWTQNYK+ LES + AG +K PA +++D+KE HTDTTVHF VT+ T +AIEK +GL K FK+ S V TSNMV FD G++ KY TP+ I+ +F+ +R+DYYHRRK L+++++ + +L N+
Sbjct: 664 PIVKVTKAKKELSFFTIPEYEAWKAETHDGRGWKIKYFKGLGTSDTNDAKKYFSDMDRHRLPFKELTIE-DRALIDMAFNKKKADDRKEWLRGFVPGTYMDHDVDEVPISDFINKELILFSMADNVRSIPSVVDGFKPGQRKVLFGCFKRKLKNEIKVGQLSGYISEHSAYHHGDVSLQGTIVGLAQNFVGSNNLNVLDPNGQFGTRLQGGKDAASARYIFTNVAQITRAVFHADDDNILQYLNDDGQSIEPNWYIPVLPMVLVNGTDGIGTGWSSYIPNFNPSDIVANLRRKLAGEEMEPMHPWYRGFRGTIE-KADKE----GYKCSGLIERLDDSTVEITELPIRTWTQNYKEMLESWV-------------AGTEKQPA---------WVKDYKEYHTDTTVHFVVTLTTAGKEAIEK-DGLEKVFKISSKVNTSNMVCFDPTGKIKKYATPEDIVSDFYDVRLDYYHRRKKHLVSELELVYDRLSNQA 1127
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match:
A0A482RTD7_9ARCH (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTD7_9ARCH)
HSP 1 Score: 537 bits (1383), Expect = 3.550e-180
Identity = 271/457 (59.30%), Postives = 343/457 (75.05%), Query Frame = 1
Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLL---PGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAIEKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYD 1362
P++ G++ELSFYT+PEY WK+ N GKGW KYYKGLGTS++ EAKEYF+ LDTH+L+F W D++ DLIDMAF+KKRVEDRK WL +AG H DY +TY++F+N ELILFS DN+RSI +DG KPSQRKVLF+CFKRNLK+EIKV QLAGYVSEH+AYHHGEASL TI+ MAQNY GSNN+NLL+P GQFGTRLMGGKDAASPRY+F++LE + RA+FHPDDD LL YLD+DG SIEP Y P++P++LVNGSDGIGTGWSS +P Y+PR++IENLR I+G+ EM PW+ GF G + K K + G +++ID+ TV I ELPV WT +YKQFLES++ PGA A K K + A KE + + +++DFKENHTDTTV FTVT +E L+ +++ GL K FKLES+++T+NM LFD + Q+ K++
Sbjct: 438 PIVKCTKGKTELSFYTIPEYQSWKEENEEGKGWRIKYYKGLGTSSAAEAKEYFSNLDTHELDFTW--DDRADDLIDMAFAKKRVEDRKLWLLGLEAGVHIDYKAAKITYDNFVNHELILFSHADNERSIAHFMDGMKPSQRKVLFACFKRNLKQEIKVAQLAGYVSEHAAYHHGEASLTQTIVGMAQNYVGSNNINLLSPCGQFGTRLMGGKDAASPRYVFTKLENITRAIFHPDDDPLLEYLDEDGQSIEPVHYAPIIPMVLVNGSDGIGTGWSSTIPTYNPREIIENLRLMIQGELPQEMMPWFRGFTGQVQGKAGKD--TSSFVLSGTMDQIDEQTVVISELPVGKWTTDYKQFLESVVIGGPGAAAATNKDKDKEDGQ---AVAKEPAGAPFVKDFKENHTDTTVLFTVTCPSEKLEGLDQA-GLMKKFKLESAISTTNMHLFDSNKQIRKFE 886
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.90e-273 / Id = 80.44 Expect = 1.28e-209 / Id = 64.12 Expect = 1.23e-196 / Id = 59.76 Expect = 3.14e-193 / Id = 57.69 Expect = 3.32e-191 / Id = 58.08 Expect = 9.43e-184 / Id = 57.49 Expect = 2.95e-183 / Id = 58.57 Expect = 1.09e-181 / Id = 56.85 Expect = 3.46e-180 / Id = 54.97 Expect = 3.55e-180 / Id = 59.30 Sequence A0A6H5KFS2_9PHAE A0A835YRC0_9STRA A0A7S3XNX1_HETAK A0A7S3XY17_HETAK W7TC60_9STRA A0A1V9Z4P5_9STRA K3X2K0_GLOUD A0A024G308_9STRA A0A120E6S9_9BASI A0A482RTD7_9ARCH Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9568.17280.1
>prot_H-paniculata_contig9568.17280.1 ID=prot_H-paniculata_contig9568.17280.1|Name=mRNA_H-paniculata_contig9568.17280.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=489bp
MGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFA back to top mRNA from alignment at H-paniculata_contig9568:604..9098-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9568.17280.1 ID=mRNA_H-paniculata_contig9568.17280.1|Name=mRNA_H-paniculata_contig9568.17280.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8495bp|location=Sequence derived from alignment at H-paniculata_contig9568:604..9098- (Halopteris paniculata Hal_grac_a_UBK monoicous)CCCTTGCTGTGG ATGGGTTCAGGGCGCAGCGAGCTGTCATTCTACACGGT
GCCAGAGTACATGGGGTGGAAGGACACGAACAACAACGGCAAGGGTTGGA
GTGCCAAGTATTATAAG GTATTCAAGTATCCAAACAGATACCGCTGGGAC
TGCGTTGTGTAGAAGAAGTAAGGTAAACGAGCCACTGTAGGGTAAGGTAG
GGAGGGCAGTCGAGTCGGAAGGTGGCTTGTCCCCCGGTTTACTACGTGAG
GCCATGGTAGCAGATCTCATAAAGCTGGAGAAACTGATGCCATCAGGGAG
CAAGCAAGTACTCCGGGATGAAGTAGGGCGAGAGCTATCCCATAGTTGCA
TGGTGGAGTATAGACTGTCTGTAAGTATTATACTAGTTGAAAAAGAGGTG
GACGAATCTGCGTGTAGTTTTTGAGTGTGGTCGATGATATTGATGATGAT
TGGCTGATGATTTTTTTTTTTTAGCCCCCGGAAAGCTGAGGCGAAAACCT
CTATCCGATGCTTCCATACCGAAGTACGTCTACATTTCCTTTTGCAGAAC
AGAGTTATTCGCTCCTCTGCGGGGTAGGTGCCACCCCGGTTCGGCTAAAC
CAGGTAGGAAGTGTGGGGGTTGCACCCACGAAAAGACCTCTGACTAGACT
TCCAGTCATGTTCAGTTTACGAGCTACCCAATCCGTTCGGGCGTAGGTCC
GTGGTTGGCTGATGATTGGCTGATGATTAACTAATGATTGGCTGATGATT
AACTAATGATTGGCTGATGGTTGAACAGGGTCTGGGTACTTCGACCTCCA
AAGAGGCTAAGGAGTACTTCGCGGCGCTTGACACGCACCAGCTGGAATTC
GAGTGGAAAAGCGACGAGCAGGACTCGGACCTCATCGATATGGCCTTCAG
CAAGAAGCGAG GTAACTGTACTTGGATCATCCACCGTTTTATCTAGCATC
TTTTATATATTCCGCGGTTCGGTCAGATCAGATCGTTCACAGATGGATCG
CTCCGCTCATTTTACACCGGTAGATACCATTGTATTATTCGTATACCATT
TTGATTGATATGTGGTTCCCGCCTCTGATGGGTACCCTACCGATTATGAG
CACATGCTGGTCCACGGCTGATGCGTACGAGCCACTTCATACCGATATTG
ATGGGTCCGGTGTGTGAAATATTTGCCAGGAGCCGTTTTATCCTACTCGG
CTTGGTGTTCGGCTGTCATGCCCGAGAGTGATGTGACTGTCGTGTCGTGT
TGGCTTTATCACTGGTGTTGATGGTCGTGTTGGAGCCACGGCAAGGCTTT
CCCGTCGTAAGTAGTATGTCTTGTTTTCACTAGTAACTTGGTCCTGGAGA
GGTGATGGAGAGGTACCCAAAAGTAATGTAATCGTTCATCACCGGGAAAT
GATTGACTTGTAATGTCGTTTTGTGTTGTTTTGTAATGTTTATTTTGTGT
TGGCGTATCTTGTGTACAGTTGAGGACAGGAAGGACTGGCTACGGGCATT
CAAGGCGGGTACGCACGCTGACTACAACGTGGAGTCCGTCACGTACGAGA
GCTTTATCAACAAGGAGCTCATTCTCTTTTCC GTGAGTATCAAAACGAAA
CGAAACAGCGAGTTAGAGTACATGGCAGTGCTCCAAAATTGTTCATAAGG
CGTTAGCCTCATAGTTTATGTATACACTAGTAGTAGCAAAACCATGGATA
CGCCCGTGTAATTCGTGCTGGCCTGTCCTTGGTCCCCACGGACTCGGAGC
ACTCTTGGTCGGGAATTCTCTACCGAATAGCACTGTTCGCTGCCCTTGCA
GTGACTCGCTACGTTGCAAGAAGAGTTGTTGCTTGGCATTTAAACAGCTG
TTTCGAGACGACGACCGCATTACCGCGTTCATTTGTCTAGGATTACATGA
CCACCCGATTCAAAGGCTATCTTAATATCAACATGTATATAGGAAATAAT
GTCGGGGTACAGATTGAGCAGCATCTTCCGAGTAAATTTCTTCAGCAGGT
GGGAAAAAATGAGCCGGAGAGTACAAAATTTTCCCCAATCTTGCATTTTT
TTTTTTTTCCCCCGACAGATGGAGGACAACAAGCGGTCCATCCCGTGCCT
GGTGGACGGGTTCAAGCCCTCACAGCGCAAGGTTCTTTTCTCGTGCTTCA
AACGGAACCTCAAGAAGGAGATCAAG GTAATCAAATATTAACTGTATAAT
GTTGCCGTTCGTGACGTCGTGACGATGTATCCATATTAGAAGATATGCAC
ACGTGTCATGTCATCCGGGCAGTGAGTGCTGTGTAAGAAGCCAAGCTCCG
CGCGGCGTTTCGCCGCCATCTTTAGGCGTGATTCGTAAAAAAATCATGAC
CTAGAGTAACGCATCGCCACCATATGGAGGAATCACCAACCTTTTATATT
CTAAAAAATATAGGCCGAGAGCCTATCCTTCTGGACTAGTCTTTACATTC
ATATTGTTACATTTTGAAAGTCTCGATTCTGCCTGCCCGATGTTGATACC
TGTTTGTACATTGGTTCAGGTGGTGCAATTGGCTGGATATGTGTCGGAGC
ATTCTGCCTACCACCACGGTGAAGCATCTCTCAACGGCACCATCATCGCC
ATGGCCCAAAATTACACCGGCAGCAACAACCTGAACCTGCTCAACCCGGG
GGGTCAGTTCGGTACTCGTCTCATGGGCGGCAAG GTACGCAATGTGACGT
ACGTACGCCGTGTGCTGTCGATAGAGCTATTGAGCTAGTTGGCAGGGGGT
GAGAGATGGTTCGCTATGTTCGAGTTACCTAGTAATGAGTTCAATGAGTT
TTGATGTCTCGAGTCAGATCTTAAATCTCATCACTAGATAACTGCACACG
TACAAGTGCATTTTTTAGTCATAAGCACGATTTTCCATCCGAGTGTTTTT
ATTAGCGACTCTTGTGCGATATTCCTGAACTCCCTGGCTCTCGATCTCTC
CCAGGTCTCTTTTCGCTATTTCGCGTTAATCGCTGCAGCTTGGAATAAAC
CGCCGTCACAGCTTGGATACACCGTGTCACGGTTGTCACAAGACGAGTGT
GCTGTTTTTTTCAGCTGGATTAGATCCAGTATGTTGGGACTTGGGTTAAG
AATACCTCATTCCCTGCTCATGCATCTCGCTCCTCTTCCTGCCTTGACAT
TTCCCTCAAGTTTAATACCCATTTTTGTACTGAATCAAATCTACTATACT
ACGTATTAGTGCTTCCGGTACGGTACTGAGACGATGTTTCAATCTATTCC
GATGCCAAAGCTCCATTCATCGTAATGAAGCTATACCCACGCGACATATC
TGAACGTTCCTTCCGCCAGGTCGCAGCCAGTCCTTCGCACATGACCATAG
ACTGGTATGAGTTCGAGGTGACCTTCATCAATGTTCGTGTAAATTTTTTT
TCAAGCGGTTGAACGTTTTGTCGGCTACATTTTGCAATGCCAGACCAATT
TCGCCTACAAGTCAACCGTAACAAACGTGAGTTCAGTTTTTTTCACGGGA
TGCATTTGAGCCAGCCCTCGCTGCATGCCACAATAAACCATTTCTCCTTC
CGAGTAATGGTGCAAGAAATGCTATTGTAGTAGTTTTACCGTGGTCATGT
TCCAGCGGCCAGTCCTCTCTATACGTCACATGAAACCGTTTCACCTTCCA
AGCAGCCATAAAAAAACGCCTCTTCAATCCATTTTCCGTGATACGCTTGA
AACGCCTTTAGAGTTGATCCAGCAGCCGGCCCCCGTTACACGTCAGATCA
AACCGTTTCACTTTGTAAGTGACCTTTCAAGACGCCCTTTCCAAGCAACC
CACCGTGACATGTCCCAACGTCTTTTTTTTTTAATATAGGATGCGGCCAG
CCCCCGTTACATCTTCTCGCGCCTGGAGAAGGTGGCCCGCGCAATGTTTC
ACCCTGACGACGACGCGTTGCTTGCCTACTTGGATGATGACGGTCTTTCT
ATCGAGCCCGAATTCTACGTGCCGGTGGTGCCGCTCATCCTGGTAAATGG
ATCCGATGGCATCGGTACAGGGTGGAGCAGCCAG GTGATGAAATCGTTTT
CGGTGTTGAGTGTTGCGATGGTGTTGGAGTCAACATAAACAATACTGTAC
TAGTGTAGCGATTATTCGAAGATGTTCGTCAGTTCTTGAGTGTAAAGGTA
TGCTCGGCTCTGTGGTAGTGTACCTTCATGCTACGGTTGAGAGATTGGAG
GGTAGGGTAGTACCCAGTAAGACATTTAGACAATAAGGGGAAAATTGTTT
TATCTGCAAACAGTGGTTTGTTTGATACTGTGAGAATATTGAACAAAATA
ACATTTAATCAAAATAAATGCTGAGTATTTCGGGAATGGATGGTTTGTAC
TACGGCAAATGGAGAATTGATATTCTGTTGGAGGTGGTGAGTCGAAATCT
TGCTCGTTTCGTGGCACAGAATAAGTTGTAACCGCTTGTGCACTGATAAT
TATTTGTCCCACCTGGTGTATGTGTCATACTTTGTTGGAGTCAATTAACG
AGAAGCGAGTGGATCGTCATGTCGTGATCCATTCGTACCGATATTTCAGC
AGTACTACTGCTCTTGTTCACGCTCGAGACGAACTATGTGCGGGCGCGCA
GGCAGCCCTAAAGTATTGATGCCCTTCTCGTTCGTTTTCCAATTTATTGA
ATACTTGGGAGTCGTTGTAGACGTAATAAGTCTGGTTACAAATGCTGAAT
CACACTCGATTCCTTTTTATTTTTTTTTCCCCGCGGCGAATTCTGTATCC
AATTATCCATTCGTATCCGCCTGGAAGGTGCTTTTGTTCGTTTCACGGAC
ATCCATGGTTGATTCTGAAGTCTACACCGACTGACTTGACTGCCTCTGTC
GCGAAACGTGCAGACGGTACGGTGGTCTTTCCTCGATTATTGGACGATTG
TATAATCCAAAAATGATTTTCCTGGTGTGTCATGTGATGTGATGTGATGC
ATGCTGTATGGACAGGTTCCTAATTATTCGCCAAGGGACGTTATCGAGAA
TCTACGGAGGCGCATCAAGGGCCAGGGTTTCGTAGAGATGCAGCCGTGGT
ATTCTGGCTTCGCGGGGTCCATCACC GTGAGTGGGTTGTTTCGTCTTTGG
CCCTTTTTGTTTTCGTCGTCCGATTTACTCTTTTGTTTTTTTCTTGCATG
AAATTTTTTCTGTATTTTTGGTCCGTAAAGCTTGTCTTCGCTCGTCGTGA
GAGCGTGAAGCATTTAAAAAAACAGGGATTTGCAGTACTACACGCAATGG
TGAGAAATTTTACTTTGTGTGTGTGGAGCGCGGAGCACGGGAGTGTACTG
TGTTGTTGAAATGTGCCGGCTGTTACTGTGGGTGGTGTGTGATGCATATG
TATTGTACGCTTGAATGTCACGCACGCTATGGGTAGATGCTTGTCGCGTC
TCGCAAGCCAGCATGAATGGCGTCATTCGTTGTAAATTGTAACGCAATCC
CTGATGGCAGTGTATTAGTTCATGGCGAGCTTGTCCCTGTTGCGTTAATC
GGCTAGCAGTCACTTGTCTTTTTCACCTTGCTGTATGGGGACACGCCATG
TGACGTGACGAGTGTCTGGCAGTCATGTATAGGTCCAACGACTGCGGCCG
ATGTTCGTGCCACTCGTGTAGTAGCGGTGGTTGGTTACTCGTGGAGGCTG
GCTTTGGGACATGAGTCATGGGGATCAATCGGCTGTACTCGTGGGATTTA
CCGGAGAGTTGCACTGTCTACTACAGGAGCCGATTGTAATAGTGCGATTG
TCCAGAAGTCCATTTTTCGTATTCAACTCCGTCATGTGTTCCCGAATTGA
GGTTCGGTCGTGTTGGTGCCGTTCTGCAGGCTAAGACGAGCAAAAAGGGC
GTGGATGGAGGGTACTCGTGCATGGGCATCGTGAACCGCATCGATGACAC
TACG GTAAGCTAAAATAAAAACTAAAAATAGCCCATTATATTTTGTACTC
ATTTTCTTTAAAAAAATTTAATTGGCATTTCATTTCATGCAGTCATTGCT
GATATGGGATCCTTCAAACTGTACACTGTGCAATGTTTGATCGCCCATGT
TTGCAGCGCCAGGATTAAATAGAGTTTTTTTTGCTTGGCAAGTGCATTGT
CGAAGTTCTATCCTCTTTTATTATGGCGGGAAAATAGCTCTGTGCGGCAC
AAGCATATATATCCATGTACAATTATATACATGGAGGTCATTGGCCCCTT
CCCTCTAAATGTGTCTCTCAATACTCTTATCAAATTCTTTGATTTTTGAG
TTGGACGGATAAAATGATGAAGGATTATACAGGCCGACCCACCTTGTCAA
GTTTTTTGCCAATGGTCCACCTTGATCAAGATGGCTTGTATGAGAGTGTA
TCGTCTCCGCATAACTCGATTTTTTTTCACGTACTAGGGATAAATTATTC
TTTGACATTTATCTCGAATGAAACTGTCCGCACAAAGCCTTTTTTTTTTT
TTTTCATGTCGATAATTTTTTTTTTTTTGCCTTTTTATTGACATGATGAA
AGTAATATTTCGATGTATGTATATATAATGCGATTTATTAATTCACTATG
ATTCCGTCGTGGTTGTGTGTGTGTGTGTGTGTGATTTTTTTTTTTTTTTT
CTTGCAGGTGGAAATCTTGGAGCTTCCTGTGCGGACGTGGACTCAAAATT
ATAAGCAGTTCCTGGAGAGCCTGCTTCCGGGAGCGGAGGACGCTAAGGCC
AAAGGCCCTGCTAAGGCGGGTGCTAAGAAACCACCCGCAAAGGAAAAAGA
GAAATCGACTAGCCGGTACATAAGGGACTTCAAGGAGAACCACACTGACA
CTAC GTGAGTAGATAAATTGAGTTTGTATGGCTTTAAAAAAATTCTTGGG
TGAAATTCCCTCGAGAAGGCTGATATTCTAATGGTAACATTCTTTGAAGA
AATGAACCGGAGTGTGACTAACTACTACAAAATGCTGGGGAAGGCCGATT
AAAATCGGTTAAAGCTGGATTTGTGCGAAATCTATTCAAGGAGAGCATTC
TAATTAATAATAATTAGGGGTAGAGCACTGTGCACGCCAGGGGGGTCTTT
GGTTGCGGAACTTTGGCCAACTGTGAATAACTAGACTGAGTAAGAATCCC
AAGATATGGTATGATGGAGAAATTAGCACCGTGAGGTTCAGTACGTATCG
TAGCCTCTTTTTTTTTTCCGGGCCCTATTTGCTAGTCTTTTTTCGAGTCT
TTGTTTTAACTATTGTTTATAGTGAGTACGAGTATGCCTGATCAACTCGG
TTGGTTGGTTGGGTGGGTGGGTATCCAGCGTAATGCCAGGTTGATAAAAC
ATGCAATGATTTAATGGTCGGTGTTTACATACGATGTATAGGCTTCACAT
AGTTATAAAGAGGACCTAATGCTCGTGTTGTGCTGTGGTCCGGCCCTTCA
CGTGTAGTGGCGCCTCTTACGGTGGTGGGCTGTCACCGTGGCGTAGAGAC
AGTTACCACCGTTGGCTATTATCGTACTGTCAATTGCAGTCGATCTACCG
ATGTCAACCCTTCGAGCATACTGCGAACCTGCAGTTGGTAGTTATCGCTG
TGTCGTGAATTACCGCGGTGTACTAAGGACTGCAAACATGGCATGTTCGG
AGTTAAGGGCCGACCGTTAGACCGCGATGGATTGTGTTTTTCTGCCAATA
TGGTGTCATGAAGACTTTAGTCCTTTGCAGCTGTAGCTTGCAGTACGAAT
AGTCTCTCTTTGGTATCGATCGTTGGTGCTTTGTTGCTTACTAGGATGTC
AGTATTATGAGTGCATTTGTTTACTGTCTCTACGTGGTCGATGAGAGAGG
TGGGCCGCTGAGCTGCACACCGAATCGCAAGATATACCACGCTCTGTGTG
TTGGTTCTTAGTCATGTACCCTGTACAGTCAGTGTCCATCTTTGTTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTGTTTTTTGTGGGCAGGGT
GCATTTCACGGTGACGATGCACACGGAGGACCTAGACGCTATCGAGAAAG
GCGAAGGGTTATACAAGTTCTTCAAGCTGGAGTCGAGCGTAACGACCAGT
AACATGGTGCTCTTTGACCAGGACGGTCAGCTCTACAA GTGAGTTTGTTT
GAATATGTTTGTGTAAATTGGTTCGATGCTGAATCCTCACTTTGATGGCG
CTTTGATGACACTTCTATTATTGGGAACGTAAAGAGCTACGGGCTACGAT
ATATTAGCATGTTTTTTCACGTTCCAGGGTTTAGTTTTGAATTTGTGCAA
TCGATGATTGCATTACCCCAGCTGTGCAGTAGTTCATCGTTACAGGTTGA
TGGCCGGCCGTCGGCCGAGCAGTACACAGACTTACTGTCGTCCAATGGGA
TGTATGTATGTATCTGCGCAGGTATGATACACCTCAGCACATCATGGAAG
AGTTCTTCACGCTCCGCATGGACTACTACCACCGGCGGAAGGCGTCGCTC
ATGACCAAGATGCAGAACGAGTGGAGCAAGCTCGACAACAAGGTA back to top Coding sequence (CDS) from alignment at H-paniculata_contig9568:604..9098-
>mRNA_H-paniculata_contig9568.17280.1 ID=mRNA_H-paniculata_contig9568.17280.1|Name=mRNA_H-paniculata_contig9568.17280.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2934bp|location=Sequence derived from alignment at H-paniculata_contig9568:604..9098- (Halopteris paniculata Hal_grac_a_UBK monoicous) back to top