mRNA_H-paniculata_contig9547.17268.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9547.17268.1
Unique NamemRNA_H-paniculata_contig9547.17268.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig9547.17268.1 vs. uniprot
Match: D8LC83_ECTSI (Beta-glucosidase, family GH3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC83_ECTSI)

HSP 1 Score: 689 bits (1778), Expect = 4.370e-237
Identity = 363/531 (68.36%), Postives = 418/531 (78.72%), Query Frame = 1
Query:    1 QVGQMTQLDLALFVSPENGELDEQKLIDWMTKYRIGSLFNSPFAGHVGSWTATEWRRVIRRCQQIASGAGSKLPLLIGLDSVHGANYVEGAVIFPQQIALAATFNPKLAGEAGRVAARDTRAAAVPWLFSPILGLATQPLWARTYETFGEDPFLASRMGSELVKGIQASLP-GGRDADDGEPLKAAACMKHFVGYSHPTSGHDRSPSRIPEQELLEMYLAPFQAAVEAGVVSAMESYNELNGVPVASSRKYLVDVLRGRLQFLGMLVTDYAEIVNLDNHHGVSGSPEESVGMAMRDTSIDMSMVPMDPSFTEALLALAKAGTVSENRINRSVRRILSLKESVGLLDTPLPSNQSPLIAKVGSSRDKESALQASREAITLLKNDDMP-KRNDGDAGGPALPLDRSKVLYSKILVVGPACDSLSLQSGGWTKHWQ--AREKKFAPQEGRTILQGIRGLLDPSTLEKGNANSG-----------GGDEPSPKSSGTNAXXXXXXEDMKVTVVFKKGVSVDGANEDDRDEALSEV 1548
            +VGQMTQ+D+ +FV PE G LDEQKL  ++T+YRIGSLFN+PFAGH GSW A++WR+V+RR QQIA GAGSKLPLL+GLDSVHGANYVEGAV+FPQQI LAATFNP LA EAGRVAARD+RAAAVPWLF+PILGLATQPLWAR +ETFGEDPFL SRMG  LVKGIQAS   G  D+DDGEPL+AAACMKHF+GYSHPTSGHDRSPSRIPEQELLEMYL PFQAAV+AGV S MESYN LN +P+ASSR+YLVD+LRGRL FLGMLVTDYAEI NL++HH VS   EESV MAM DTSIDMSMVP+D SF E LL L + GTVS NRI RSVRR+L+LKE +GLLD+P+PS QSPL+ K+GS  D E+ALQA+RE+ITLLKN  +P K  + +    ALPLD SK    K+LVVGPACDS +LQSGGWTKHWQ  +  ++F+P EG TILQG++G LD S LE G    G           GGD+PS                  + VV+KKG+ VDG+NE DRD ALSE 
Sbjct:   58 KVGQMTQVDIGMFVDPETGVLDEQKLTVFVTRYRIGSLFNTPFAGHSGSWEASKWRQVVRRAQQIAEGAGSKLPLLVGLDSVHGANYVEGAVLFPQQINLAATFNPALAREAGRVAARDSRAAAVPWLFAPILGLATQPLWARVFETFGEDPFLTSRMGEALVKGIQASQEWGSGDSDDGEPLRAAACMKHFLGYSHPTSGHDRSPSRIPEQELLEMYLPPFQAAVDAGVSSGMESYNSLNSIPLASSRRYLVDILRGRLGFLGMLVTDYAEIANLEHHHRVSAGQEESVFMAMEDTSIDMSMVPLDASFAETLLRLVRDGTVSNNRIERSVRRVLALKEVLGLLDSPVPSLQSPLLGKIGSQEDHEAALQAARESITLLKNGHVPTKGEEEEESVKALPLDPSK--GGKLLVVGPACDSFTLQSGGWTKHWQGASNPEEFSPDEGLTILQGVQGYLDGS-LEIGVGEEGESPTAVVEEEEGGDQPS------------------IEVVYKKGIRVDGSNEPDRDAALSEA 567          
BLAST of mRNA_H-paniculata_contig9547.17268.1 vs. uniprot
Match: A0A6H5KCT2_9PHAE (Fn3_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT2_9PHAE)

HSP 1 Score: 429 bits (1104), Expect = 2.010e-137
Identity = 231/363 (63.64%), Postives = 273/363 (75.21%), Query Frame = 1
Query:  472 MGSELVKGIQASLP-GGRDADDGEPLKAAACMKHFVGYSHPTSGHDRSPSRIPEQELLEMYLAPFQAAVEAGVVSAMESYNELNGVPVASSRKYLVDVLRGRLQFLGMLVTDYAEIVNLDNHHGVSGSPEESVGMAMRDTSIDMSMVPMDPSFTEALLALAKAGTVSENRINRSVRRILSLKESVGLLDTPLPSNQSPLIAKVGSSRDKESALQASREAITLLKNDDMP-KRNDGDAGGPALPLDRSKVLYSKILVVGPACDSLSLQSGGWTKHWQ--AREKKFAPQEGRTILQGIRGLLDPSTLEKGNANSGGGDEPSPKSSGTNAXXXXXXEDMKVTVVFKKGVSVDGANEDDRDEALSEV 1548
            MG  LVKGIQAS   G  D+DDGEPL+AAACMKHF+GYSHPTSGHDRSPSRIPEQELLEMYL PFQAAV+AGV S MESYN LN +P+ASSR+YL+D+LRGRL FLGMLVTDYAEI NL++HH VS   EESV +AM DTSIDMSMVP+D +F E+LL L + GTVS NRI RSVRRIL+LKE +GLLD+P+P+ QSPL+ K+GS  D E+ALQA+RE+ITLLKN  +P K  + +    ALPLDRSK    K+LVVGPACDS +LQSGGWTKHWQ  +  K+F+  EG TILQG++G LD      G+   G G+E  P    T            + VV+KKG+ VDG+N  DRD ALSE 
Sbjct:    1 MGEALVKGIQASQEWGSGDSDDGEPLRAAACMKHFLGYSHPTSGHDRSPSRIPEQELLEMYLPPFQAAVDAGVSSGMESYNSLNSIPLASSRRYLIDILRGRLGFLGMLVTDYAEIANLEHHHRVSAGQEESVFIAMEDTSIDMSMVPLDATFAESLLRLVRDGTVSNNRIERSVRRILALKEVLGLLDSPVPALQSPLLGKIGSQEDHEAALQAARESITLLKNGHVPTKGEEEEESVKALPLDRSK--GGKLLVVGPACDSFTLQSGGWTKHWQGASNPKEFSSDEGLTILQGVQGYLD------GSLKVGVGEEGEPP---TVVEEEEEGHQPSIEVVYKKGIRVDGSNAPDRDAALSEA 352          
BLAST of mRNA_H-paniculata_contig9547.17268.1 vs. uniprot
Match: A0A4D9D2H5_9STRA (Fn3_like domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2H5_9STRA)

HSP 1 Score: 398 bits (1022), Expect = 1.330e-124
Identity = 225/460 (48.91%), Postives = 292/460 (63.48%), Query Frame = 1
Query:    1 QVGQMTQLDLALFVSPENGELDEQKLIDWMTKYRIGSLFNSPFA----GHVGSWTATEWRRVIRRCQQIASGAGSKLPLLIGLDSVHGANYVEGAVIFPQQIALAATFNPKLAGEAGRVAARDTRAAAVPWLFSPILGLATQPLWARTYETFGEDPFLASRMGSELVKGIQASLPGGRDADDGEP--LKAAACMKHFVGYSHPTSGHDRSPSRIPEQELLEMYLAPFQAAV-EAGVVSAMESYNELNGVPVASSRKYLVDVLRGRLQFLGMLVTDYAEIVNLDNHHGVSGSPEESVGMAMRDTSIDMSM-VPMDPSFTEALLALAKAGTVSENRINRSVRRILSLKESVGLLDTP--LPSNQSPLIAKVGSSRDKESALQASREAITLLKNDDMPKRNDGDAGGPALPLDRSKVLYSKILVVGPACDSLSLQSGGWTKHWQAREKKFAPQEGRTILQGIR 1350
            +VGQM QLDL  F+ P + +L+  +L     KY IGS+ NSPF     G    W+A EW+ ++RR    A   G  +P L G+DSVHGANY+ GA +FPQQI  AA+FN +L    GR+  +DT+A  +PWLF+PILG+ TQPLW+R++ETFGE P+LA+ MG  +++GIQ       D+D   P    AAACMKHF+ Y    +GHDRSP  +  + +  +Y  PF AAV EAGV SAME+Y E++GVP+ASSR+YLVD+LR  + F GMLVTDY EI NL   H V+    ESV +AM DTSIDMSM  P+   F +ALL L KAG V E R++ SV R+L+LKE +GLLD P  L      L A VGS+ DK +AL  +RE+I LL+N D             LPLD  ++   +ILV G  C SL +QSGGWT HWQ   +     EG T L+G++
Sbjct:   23 KVGQMLQLDLVGFLDPGSLDLNTTRLAAVFRKYHIGSILNSPFTLGPCGGKNGWSAGEWKELLRRIHSTAQEVGI-VPPLYGIDSVHGANYIYGATLFPQQINAAASFNRELVWAMGRIQGKDTKAGGIPWLFAPILGINTQPLWSRSFETFGECPYLAAEMGKAIIRGIQT------DSDPDFPGLPPAAACMKHFIAYPAAVTGHDRSPIELNARTVKSLYAPPFWAAVREAGVKSAMEAYTEVSGVPMASSREYLVDLLREEMGFEGMLVTDYNEIANLHQFHFVTEDMRESVRLAMLDTSIDMSMNPPLAVGFADALLDLVKAGVVPEARVDTSVARVLALKEWLGLLDDPFHLLDAFPALEASVGSAEDKAAALALARESIVLLENPDG-----------LLPLDPDRMAGKRILVTGRGCHSLGMQSGGWTLHWQGARRNEVFTEGSTYLEGLK 464          
BLAST of mRNA_H-paniculata_contig9547.17268.1 vs. uniprot
Match: A0A4D9DEX2_9STRA (Fn3_like domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEX2_9STRA)

HSP 1 Score: 393 bits (1009), Expect = 2.260e-124
Identity = 218/457 (47.70%), Postives = 286/457 (62.58%), Query Frame = 1
Query:    1 QVGQMTQLDLALFVSPENGELDEQKLIDWMTKYRIGSLFNSPFAG-HVGSWTATEWRRVIRRCQQIASGAGSKLPLLIGLDSVHGANYVEGAVIFPQQIALAATFNPKLAGEAGRVAARDTRAAAVPWLFSPILGLATQPLWARTYETFGEDPFLASRMGSELVKGIQASLPGGRDADDGEPLKAAACMKHFVGYSHPTSGHDRSPSRIPEQELLEMYLAPFQAAVEAGVVSAMESYNELNGVPVASSRKYLVDVLRGRLQFLGMLVTDYAEIVNLDNHHGVSGSPEESVGMAMRDTSIDMSMVPMDPSFTEALLALAKAGTVSENRINRSVRRILSLKESVGLLDTP--LPSNQSPLIAKVGSSRDKESALQASREAITLLKNDDMPKRNDGDAGGPALPLDRSKVLYSKILVVGPACDSLSLQSGGWTKHWQAREKKFAPQEGRTILQGIRGLLD 1362
            + GQMT+LDLA+ +      +DE K+   +  YRIGS  NSP AG + G WTA EWR+ +R  Q++A   G  LPL+ GLDSVHGANY++GA IFP Q  LAATF P  A E GR+ A+DT AA V W+F+PIL L     W R YETF EDP L S MG+E++ GIQ+ +         + L  AACMKHF+ YS  T+GHD++P  +  +++   YL P++AAV+AG+ +AMESY E++GVP+ASSR+YL ++LR  L F G+LVTDY EI  L   H V+ +  E+V +AM DTSIDMSM   D  F + L+ L +AG VS +R++ SV RIL  KE +GLLD P  L  ++SPL A +GS+ DKE AL   RE++TLLKN+              LPLD  +     ILV GP   SL+ Q GGWT HW           G T+  G+R + D
Sbjct:   43 KAGQMTELDLAVAMDWSQKTVDETKVRKLIRDYRIGSFLNSPLAGDNPGIWTAREWRQAMRTIQRVAEEEGV-LPLIHGLDSVHGANYIKGATIFPHQHGLAATFKPTYAREVGRITAQDTMAAGVQWIFAPILDLGVNSRWPRMYETFSEDPHLVSSMGAEIISGIQSFMH--------DNLTTAACMKHFIAYSATTTGHDQAPVLLDVRDVENYYLPPYRAAVKAGIRTAMESYQEISGVPMASSREYLKNLLRYELDFKGLLVTDYGEINALHGEHAVASNSREAVRIAMEDTSIDMSMTAWDVDFAKDLIKLVEAGEVSISRLDESVARILQTKEDLGLLDHPYGLVQDESPLDAHLGSAADKEVALDVIRESVTLLKNEH-----------DVLPLDPKR--QYNILVTGPTAHSLAFQCGGWTIHWHGPLGDEEINYGSTLFDGLRNVTD 477          
BLAST of mRNA_H-paniculata_contig9547.17268.1 vs. uniprot
Match: A0A0G4ILL3_PLABS (Fn3_like domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4ILL3_PLABS)

HSP 1 Score: 375 bits (964), Expect = 5.320e-118
Identity = 209/453 (46.14%), Postives = 280/453 (61.81%), Query Frame = 1
Query:    1 QVGQMTQLDLALFVSPENGELDEQKLIDWMTKYRIGSLFNSPFAGHVGSWTATEWRRVIRRCQQIASGAGSKLPLLIGLDSVHGANYVEGAVIFPQQIALAATFNPKLAGEAGRVAARDTRAAAVPWLFSPILGLATQPLWARTYETFGEDPFLASRMGSELVKGIQASLPGGRDADDGEPLKAAACMKHFVGYSHPTSGHDRSPSRIPEQELLEMYLAPFQAAVEAGVVSAMESYNELNGVPVASSRKYLVDVLRGRLQFLGMLVTDYAEIVNLDNHHGVSGSPEESVGMAMRDTSIDMSMVPMDPSFTEALLALAKAGTVSENRINRSVRRILSLKESVGLLDTPLPSNQSPLIAKVGSSRDKESALQASREAITLLKNDDMPKRNDGDAGGPALPLDRSKVLYSKILVVGPACDSLSLQSGGWTKHWQAREKKFAPQEGRTILQGIRGLL 1359
            Q+GQMTQLD+A+F++ + G+L+ + L D +TKY +GSL NSP A   G++T  +WR +I   Q +A   G  +P+L GLDSVHGAN+V  A +FPQQI  AA+FN  L   A  ++A+DTR   +PW FSPIL +A Q  W R YETFGEDP+LA+ MG   + G+Q S      AD   P+  AA +KHFVGYS+P SG DR+ + IP++ L + +L  F+AA++AG  + ME+Y ++NG PVA+S  YL  +LR  L F GMLVTDY+EI NL   H V+ S  ++  MAM  TSIDMSMV  D +F+  L  L KAG +  +RI  S  R L LK+++GLL  P+P+     IA VGS+ D   AL  +RE+ITLLKN               LPL  S    ++I + GP+ DSL L  GGWT  WQ          G+TI   + GL+
Sbjct:   46 QIGQMTQLDVAVFMNAD-GQLNRKALADAVTKYGVGSLLNSPVALSNGTFTLAQWRALISDIQTVALSNGPGIPILYGLDSVHGANFVHKATLFPQQIGCAASFNIDLVQSAYAISAKDTRTCGIPWAFSPILDIALQKQWPRVYETFGEDPYLAAEMGRSAILGMQGSTT----ADLKSPVHVAASLKHFVGYSNPRSGLDRTQAWIPDRILRQYFLPSFRAAIDAGGATVMETYADINGEPVAASSFYLNTLLRDELGFKGMLVTDYSEIYNLHEWHHVAASKRDATQMAMSQTSIDMSMVATDFNFSVDLFDLVKAGDIDHDRIALSCGRALQLKKNLGLLSAPMPTTDGAQIASVGSNADWSVALDLARESITLLKNQ-----------ADLLPL--SPDAPNRIFLTGPSSDSLRLLCGGWTMQWQGAASDDELYGGQTIRSALHGLI 480          
BLAST of mRNA_H-paniculata_contig9547.17268.1 vs. uniprot
Match: A0A835ZDS0_9STRA (Fn3_like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS0_9STRA)

HSP 1 Score: 384 bits (986), Expect = 6.450e-117
Identity = 234/510 (45.88%), Postives = 306/510 (60.00%), Query Frame = 1
Query:    7 GQMTQLDLALFV------SPENGELDEQKLIDWMTKYRIGSLFNSPFAGHVGSWTATEWRRVIRRCQQIASGAGSKLPLLIGLDSVHGANYVEGAVIFPQQIALAATFNPKLAGEAGRVAARDTRAAAVPWLFSPILGLATQPLWARTYETFGEDPFLASRMGSELVKGIQASLPGGRDAD---------------------------------DGEPLKAAACMKHFVGYSHPTSGHDRSPSRIPEQELLEMYLAPFQAAVE-----AGVVSAMESYNELNGVPVASSRKYLVDVLRGRLQFLGMLVTDYAEIVNLDNHHGVSGSPEESVGMAMRDTSIDMSMVPMDPSFTEALL--ALAKAGT-----------VSENRINRSVRRILSLKESVGLLDTPLPSNQSPLIAKVGSSRDKESALQASREAITLLKNDDMPKRNDGDAGGPALPLDRSKVLYSKILVVGPACDSLSLQSGGWTKHWQ--AREKKFAPQEGRTILQGIRGLL 1359
            GQM  LDL  F+      S +   LDE+ L     + RIG LFNSP A     W+ATEWR  I      A+  GSK+P+L+G+D++HGANYV GAV+ P Q+ALAATF P+LA  AGR  ARD+RAAA+PWL+SP++G+A  PLW R YETFGEDP +A+ MG+ +    Q  + G RD                                   D EPL+AAAC KHF+GY    SGHDR P  + E+ELLE+YL P++A +       G +S ME Y+EL+GVP+ASS+ +L DVLRG L F GMLVTDY EI NL + HGV+ +  E++ MA+RDTSID+ M    P  T A L  AL   G            V+  R++ SVRR+L+LKE+VGLLD P+P+  SPL+ +VGS+ D +  + A+ EA+TLLKN+           G ALPL  +K     +LV GP+CDSL+  SGGW+ HWQ  A + +F   +G TILQG+   L
Sbjct:  108 GQMLLLDLNAFIQKPTVPSEQPATLDEELLRQVFRQARIGGLFNSPAAIDGLGWSATEWRAAI------AAREGSKIPVLMGIDTIHGANYVRGAVMGPHQLALAATFRPELAERAGRTGARDSRAAALPWLYSPVMGVAHSPLWPRVYETFGEDPLVAATMGAAMF--WQTRILGARDRRALGAERHALPPGAGNVVTKFPLLPRRLASQFERDTEPLRAAACAKHFLGYPASASGHDRDPVVLGERELLELYLPPWRAVIGRGSSGGGALSVMEGYHELDGVPMASSKHWLHDVLRGDLGFEGMLVTDYGEIANLYSWHGVAPNVTEAMVMALRDTSIDVGMFGSVPPQTAAALEAALRAVGXXXXXXXXXXXRVAHARLDASVRRVLALKEAVGLLDEPVPALASPLLQEVGSAADVDDVVAAAAEAVTLLKNE-----------GGALPL-AAKGRGGTLLVTGPSCDSLAYLSGGWSIHWQGAAHDGEFGG-DGTTILQGLAAEL 596          
BLAST of mRNA_H-paniculata_contig9547.17268.1 vs. uniprot
Match: A0A0H5R9R2_9EUKA (Fn3_like domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R9R2_9EUKA)

HSP 1 Score: 367 bits (941), Expect = 1.410e-114
Identity = 204/459 (44.44%), Postives = 286/459 (62.31%), Query Frame = 1
Query:    1 QVGQMTQLDLALFVSPENGELDEQKLIDWMTKYRIGSLFNSPFAGHV-GSWTATEWRRVIRRCQQIASGAGSKLPLLIGLDSVHGANYVEGAVIFPQQIALAATFNPKLAGEAGRVAARDTRAAAVPWLFSPILGLATQPLWARTYETFGEDPFLASRMGSELVKGIQASLPGGRDADDGEPLKAAACMKHFVGYSHPTSGHDRSPSRIPEQELLEMYLAPFQAAVEAGVVSAMESYNELNGVPVASSRKYLVDVLRGRLQFLGMLVTDYAEIVNLDNHHGVSGSPEESVGMAMRDTSIDMSMVPMDPSFTEALLALAKAGTVSENRINRSVRRILSLKESVGLLDTPLPSNQSPLIAKVGSSRDKESALQASREAITLLKNDDMPKRNDGDAGGPALPLDRSKVLYSKILVVGPACDSLSLQSGGWTKHWQ-AREKKFAPQEGRTILQGIRGLLDPST 1371
            ++GQM QLD+ +F++ E G L++  L   +  + +GS+ NSP A    G  +   WR++I   Q +A GAG K+P+L GLD +HGANYV+   +FP QI LAATFN  L  +A  ++A+DTR   +PW F+P+L +  Q  W R YETFGEDP+LAS MG E V G+Q    G          K A+ +KHFVGYS+P SG DR+ + IP++ L + +L PF++A++AG  + ME+Y + NG PV SS  YL  VLR  L F G+LVTDY+EI NL   H  + SP +++ MA++ T+IDMSMV    +F+  L  L K GT+  NR++ S  R+L LK+++GL D P P+N +  I  VGS RD+  AL  ++ +ITLLKN  +            LPL R+     ++L+VGP+ DSL L S GWT HWQ A E +F+   G TI +GIR +L  S+
Sbjct:   47 RIGQMVQLDITMFLT-EAGALNQSALHSAVEYFGVGSILNSPSAMTTEGVLSVQSWRQLITDIQSVALGAGPKIPILYGLDGIHGANYVKSTTLFPHQIGLAATFNRNLVRKAFAISAKDTRTCGIPWSFAPVLDICLQKQWPRVYETFGEDPYLASEMGKEAVLGMQGVEKGELKLS----TKVASSLKHFVGYSNPRSGQDRTQAWIPDRILRQYFLPPFRSAIKAGAATVMEAYADNNGQPVVSSEFYLKTVLRDELGFKGVLVTDYSEINNLYWWHHAAHSPSDAIRMAIQQTTIDMSMVVSSFNFSTTLTQLVKDGTIDSNRVSISCARVLQLKKNLGLFDDPFPTNDANQINSVGSKRDRHVALDVAQHSITLLKNSPLCPTCRS-----ILPLSRTS--SKRMLLVGPSSDSLKLLSSGWTMHWQGASETEFS--FGTTIKEGIRRVLHGSS 491          
BLAST of mRNA_H-paniculata_contig9547.17268.1 vs. uniprot
Match: R1D9E2_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D9E2_EMIHU)

HSP 1 Score: 362 bits (929), Expect = 5.980e-112
Identity = 208/450 (46.22%), Postives = 284/450 (63.11%), Query Frame = 1
Query:    1 QVGQMTQLDLALFVSPENG-ELDEQKLIDWMTKYRIGSLFNSPFAG---HVGS--WTATEWRRVIRRCQQIASGAGSKLPLLIGLDSVHGANYVEGAVIFPQQIALAATFNPKLAGEAGRVAARDTRAAAVPWLFSPILGLATQPLWARTYETFGEDPFLASRMGSELVKGIQASLPGGRDADDGE-PLKAAACMKHFVGYSHPTSGHDRSPSRIPEQELLEMYLAPFQAAVEAGVVSAMESYNELNGVPVASSRKYLVDVLRGRLQFLGMLVTDYAEIVNLDNHHGVSGSPEESVGMAMR-DTSIDMSMVPMDPSFTEALLALAKAGTVSENRINRSVRRILSLKESVGLLDTPLPSNQSP---------LIAKVGSSRDKESALQASREAITLLKNDDMPKRNDGDAGG--PALPLDRSKVLYSKILVVGPACDSLSLQSGGWTKHWQ 1293
            ++GQMTQLD+++ ++      +D+ KL   +  +R+GSL NSPF+G     GS  W AT+WR  +   Q  A+  G   PL+ G+DSVHGA+Y  GA + PQQ+ LAA+F+  LA  +G +  +D+RAAA PW+F+PILG+A+ PLW R YETFGEDP L +RMG+ +V+G+Q      R   +GE P +AAACMKHFV YS P +GHDR  + +  +EL + YL PFQAAV+AGV SAMESY E+NG PV  S   L  +LR R+ F G+LVTD+ E+ NL + H  + SPEE+V +A+   +S+DMSMVP D SF+  +  L   G + E R++ S  R+L LKE +GLL  P      P         L+  VGS+ D   A +A+R  +TLLKN  +P  +D +     P LP D+   +  ++LV GPA DSL   SGGWT HWQ
Sbjct:   16 KIGQMTQLDISMVLADGCPLRIDDAKLRRQLRVHRLGSLLNSPFSGTEPRCGSSGWNATDWRAAVEHIQTAAADEGLP-PLVYGIDSVHGASYCRGATLLPQQLGLAASFDESLAAASGWITGKDSRAAATPWMFAPILGVASHPLWPRVYETFGEDPLLVARMGAAVVEGMQ------RRGGEGEIPARAAACMKHFVAYSAPRNGHDREGAWLSRRELEQTYLPPFQAAVDAGVQSAMESYQEVNGEPVVGSAALLQGLLRERMGFEGLLVTDWHEVGNLHDFHRAASSPEEAVLLAIGGSSSLDMSMVPTDESFSVLMERLHARGAIDEARLDVSALRVLRLKEWLGLLPPPPAVRPPPWSDSEATVRLVESVGSASDAALAHEAARATVTLLKN--VPPFDDDERPPLLPLLPADKGGSVR-RVLVTGPAADSLGRLSGGWTAHWQ 455          
BLAST of mRNA_H-paniculata_contig9547.17268.1 vs. uniprot
Match: A0A152A5J2_9MYCE (Beta glucosidase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A5J2_9MYCE)

HSP 1 Score: 356 bits (913), Expect = 1.720e-110
Identity = 197/466 (42.27%), Postives = 290/466 (62.23%), Query Frame = 1
Query:    1 QVGQMTQLDLALFVSPENGELDEQKLIDWMTKYRIGSLFNSPFAGHVGS----WTATEWRRVIRRCQQIA-SGAGSKLPLLIGLDSVHGANYVEGAVIFPQQIALAATFNPKLAGEAGRVAARDTRAAAVPWLFSPILGLATQPLWARTYETFGEDPFLASRMGSELVKGIQASLPGGRDADDGEPLK-AAACM-KHFVGYSHPTSGHDRSPSRIPEQELLEMYLAPFQAAVEAGVVSAMESYNELNGVPVASSRKYLVDVLRGRLQFLGMLVTDYAEIVNLDNHHGVSGSPEESVGMAMRDTSIDMSMVPMDPSFTEALLALAKAGTVSENRINRSVRRILSLKESVGLLDTPLPSNQSPLIAKVGSSRDKESALQASREAITLLKNDDMPKRNDGDAGGPALPLDRSKVLYSKILVVGPACDSLSLQSGGWTKHWQAREKKFAPQEGRTILQGIRGLLDPSTLE 1377
            ++GQMTQLD++    P +  L+E +L  +   Y +GS  N+  +G V      +  + W  +++  QQI    + +++P++ GLDSVHGANYV+GA +FP    +AATFNP+ A + GRVAA+DT A  +PW+F+P+LGL  QPLW+R YETFGEDP+L S MG+  V+GIQ    G  + +DG   + +A C  KH+ GYS P +G DR+P+ IPE+ L   +L  F+AA++AG  + M +  E+NGVP+ +S KYL  VLR  L F G+ VTD+ +I  L  +H ++ S  E+V MA+ D  IDMSMVP+D SF   LL L + G + E+R+++SV+RIL+LK S+GL + P P   +  +  +GS  D+E+A     E+ITLL+N +             LPL+ S +    ILV GP+ +SL  Q+GGW+ HWQ          G TIL GI+ +L+ ++ +
Sbjct:   90 KIGQMTQLDISTITIPGSILLNETQLSYFAKTYFVGSFLNTVTSGGVQGPYHFYNVSNWLSILQTIQQITIESSPNQIPMIYGLDSVHGANYVQGATLFPHNTGVAATFNPQYAHDVGRVAAKDTSAVGIPWVFAPVLGLGVQPLWSRMYETFGEDPYLVSLMGASAVQGIQ----GNNNTEDGYLSRPSAVCTAKHYFGYSDPVAGKDRTPAWIPERMLRRYFLPTFKAALDAGAGTIMINSGEVNGVPMHASHKYLTSVLRDELDFEGVAVTDWQDIEKLHYYHKIAASETEAVVMAL-DAGIDMSMVPLDVSFPNILLKLVQDGVIPESRLDKSVKRILNLKYSLGLFEQPYPEPSNQYLDTIGSLEDRETAANMVEESITLLQNTNS-----------FLPLNPSNI--KNILVTGPSSNSLRNQNGGWSIHWQGAVSDDEFPFGTTILSGIQQVLNETSAQ 537          
BLAST of mRNA_H-paniculata_contig9547.17268.1 vs. uniprot
Match: A0A7C6ES84_9BACT (Beta-glucosidase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C6ES84_9BACT)

HSP 1 Score: 353 bits (905), Expect = 6.220e-110
Identity = 203/460 (44.13%), Postives = 284/460 (61.74%), Query Frame = 1
Query:    1 QVGQMTQLDLALFVSPE-NGELDEQKLIDWMTKYRIGSLFNSPFAGHVGSWTATEWRRVIRRCQQIA-SGAGSKLPLLIGLDSVHGANYVEGAVIFPQQIALAATFNPKLAGEAGRVAARDTRAAAVPWLFSPILGLATQPLWARTYETFGEDPFLASRMGSELVKGIQASLPGGRDADDGEPLKAAACMKHFVGYSHPTSGHDRSPSRIPEQELLEMYLAPFQAAVEAGVVSAMESYNELNGVPVASSRKYLVDVLRGRLQFLGMLVTDYAEIVNLDNHHGVSGSPEESVGMAMRDTSIDMSMVPMDPSFTEALLALAKAGTVSENRINRSVRRILSLKESVGLLDTPLPSNQSPLIAKVGSSRDKESALQASREAITLLKNDDMPKRNDGDAGGPALPLDRSKVLYSKILVVGPACDSLSLQSGGWTKHWQAREKKFAPQEGRTILQGIRGLLDPSTL 1374
            +VGQMTQ+ L +      + ELD +KL + +  + +GS+ N   A    ++T  +W R+I + Q +A       +P+L G+D+VHGA Y  GA IFPQ + +AAT+NP+L    G + A + RA+ +PW FSP+L +  QPLW R +ETFGEDP+LAS MG+  VKG++     G D     P K AAC KH++GYS P SG DR+P+ IPE  L E +L  F+AA+ AG  + M +  ++NGVPV +S+  L D+LRG L F G+LV+D+A+I NL     V+ S +E++ +A+    IDMSMVP D SF E LL L + G V E+RI+ +VRRIL LK  +GL D P P+    L  K GS   ++ ALQA+RE+ITLLKN+           G  LPL ++    ++ILV GP  +SLS  +GGWT  WQ   ++F PQE  TIL+ IR  + P  +
Sbjct:   52 KVGQMTQVTLQVVAKDSAHDELDPEKLRNAVVNHHVGSILNVVDA----AYTLDQWHRIITQIQDVALKETRLGIPILYGIDAVHGAIYTRGATIFPQNLGMAATWNPELMRRNGEITAYEVRASGIPWNFSPVLDIGRQPLWPRLFETFGEDPYLASVMGAAYVKGLE-----GDDNRVSRPDKVAACTKHYLGYSFPLSGKDRTPAWIPENMLREYFLPTFRAAIAAGAHTVMANSGQINGVPVHASKYLLTDLLRGELGFRGLLVSDWADINNLHFRDRVAASQKEAMKLAVM-AGIDMSMVPEDFSFYELLLQLVREGEVPESRIHEAVRRILRLKFELGLFDNPYPNPA--LKEKFGSEEFRQVALQAARESITLLKNE-----------GELLPLPKT----ARILVTGPTANSLSCLNGGWTITWQGDREEFYPQEKLTILEAIREKVGPQNV 484          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9547.17268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC83_ECTSI4.370e-23768.36Beta-glucosidase, family GH3 n=1 Tax=Ectocarpus si... [more]
A0A6H5KCT2_9PHAE2.010e-13763.64Fn3_like domain-containing protein n=1 Tax=Ectocar... [more]
A0A4D9D2H5_9STRA1.330e-12448.91Fn3_like domain-containing protein n=3 Tax=Monodop... [more]
A0A4D9DEX2_9STRA2.260e-12447.70Fn3_like domain-containing protein n=2 Tax=Monodop... [more]
A0A0G4ILL3_PLABS5.320e-11846.14Fn3_like domain-containing protein n=1 Tax=Plasmod... [more]
A0A835ZDS0_9STRA6.450e-11745.88Fn3_like domain-containing protein n=1 Tax=Tribone... [more]
A0A0H5R9R2_9EUKA1.410e-11444.44Fn3_like domain-containing protein n=1 Tax=Spongos... [more]
R1D9E2_EMIHU5.980e-11246.22Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A152A5J2_9MYCE1.720e-11042.27Beta glucosidase n=1 Tax=Tieghemostelium lacteum T... [more]
A0A7C6ES84_9BACT6.220e-11044.13Beta-glucosidase n=1 Tax=bacterium TaxID=1869227 R... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9547contigH-paniculata_contig9547:561..6633 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score692.6
Seed ortholog evalue1.4e-196
Seed eggNOG ortholog2880.D8LC83
KEGG rclassRC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248
KEGG koko:K05349
KEGG ReactionR00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040
KEGG Pathwayko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0000272,GO:0000323,GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005886,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0008422,GO:0009056,GO:0009057,GO:0009251,GO:0015926,GO:0016020,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044042,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:1901575
EggNOG free text desc.xylan 1,4-beta-xylosidase activity
EggNOG OGs2QQ55@2759,COG1472@1
Ec32 ortholog descriptionBeta-glucosidase, family GH3
Ec32 orthologEc-20_004800.1
EC3.2.1.21
COG Functional cat.G
CAZyGH3
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons5
Model size1560
Cds size1548
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9547.17268.1prot_H-paniculata_contig9547.17268.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9547 561..6621 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931185.5842092-CDS-H-paniculata_contig9547:560..8141622931185.5842092-CDS-H-paniculata_contig9547:560..814Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9547 561..814 -
1691481629.1492853-CDS-H-paniculata_contig9547:560..8141691481629.1492853-CDS-H-paniculata_contig9547:560..814Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9547 561..814 -
1622931185.6004043-CDS-H-paniculata_contig9547:1267..15591622931185.6004043-CDS-H-paniculata_contig9547:1267..1559Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9547 1268..1559 -
1691481629.1602821-CDS-H-paniculata_contig9547:1267..15591691481629.1602821-CDS-H-paniculata_contig9547:1267..1559Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9547 1268..1559 -
1622931185.6190753-CDS-H-paniculata_contig9547:4924..56711622931185.6190753-CDS-H-paniculata_contig9547:4924..5671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9547 4925..5671 -
1691481629.1707015-CDS-H-paniculata_contig9547:4924..56711691481629.1707015-CDS-H-paniculata_contig9547:4924..5671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9547 4925..5671 -
1622931185.6357582-CDS-H-paniculata_contig9547:6038..61591622931185.6357582-CDS-H-paniculata_contig9547:6038..6159Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9547 6039..6159 -
1691481629.180934-CDS-H-paniculata_contig9547:6038..61591691481629.180934-CDS-H-paniculata_contig9547:6038..6159Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9547 6039..6159 -
1622931185.6520917-CDS-H-paniculata_contig9547:6487..66211622931185.6520917-CDS-H-paniculata_contig9547:6487..6621Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9547 6488..6621 -
1691481629.191662-CDS-H-paniculata_contig9547:6487..66211691481629.191662-CDS-H-paniculata_contig9547:6487..6621Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9547 6488..6621 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931185.676312-UTR-H-paniculata_contig9547:6621..66331622931185.676312-UTR-H-paniculata_contig9547:6621..6633Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9547 6622..6633 -
1691481629.2022579-UTR-H-paniculata_contig9547:6621..66331691481629.2022579-UTR-H-paniculata_contig9547:6621..6633Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9547 6622..6633 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9547.17268.1

>prot_H-paniculata_contig9547.17268.1 ID=prot_H-paniculata_contig9547.17268.1|Name=mRNA_H-paniculata_contig9547.17268.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=516bp
MTQLDLALFVSPENGELDEQKLIDWMTKYRIGSLFNSPFAGHVGSWTATE
WRRVIRRCQQIASGAGSKLPLLIGLDSVHGANYVEGAVIFPQQIALAATF
NPKLAGEAGRVAARDTRAAAVPWLFSPILGLATQPLWARTYETFGEDPFL
ASRMGSELVKGIQASLPGGRDADDGEPLKAAACMKHFVGYSHPTSGHDRS
PSRIPEQELLEMYLAPFQAAVEAGVVSAMESYNELNGVPVASSRKYLVDV
LRGRLQFLGMLVTDYAEIVNLDNHHGVSGSPEESVGMAMRDTSIDMSMVP
MDPSFTEALLALAKAGTVSENRINRSVRRILSLKESVGLLDTPLPSNQSP
LIAKVGSSRDKESALQASREAITLLKNDDMPKRNDGDAGGPALPLDRSKV
LYSKILVVGPACDSLSLQSGGWTKHWQAREKKFAPQEGRTILQGIRGLLD
PSTLEKGNANSGGGDEPSPKSSGTNARRRQEEEDMKVTVVFKKGVSVDGA
NEDDRDEALSEVGQG*
back to top

mRNA from alignment at H-paniculata_contig9547:561..6633-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9547.17268.1 ID=mRNA_H-paniculata_contig9547.17268.1|Name=mRNA_H-paniculata_contig9547.17268.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6073bp|location=Sequence derived from alignment at H-paniculata_contig9547:561..6633- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTTGGACAAATGACTCAGCTGGACCTAGCGCTCTTCGTCTCTCCAGA GAACGGGGAGCTGGACGAGCAGAAACTGATCGACTGGATGACCAAGTATC GGATAGGATCTTTGTTCAACTCGCCCTTCGCAGGGCACGTGGGAAGGTGC GTACTAGATTATGATAATAATTGTTTCATGTTCCCTTGGTGTTTTCCGAA TTTTCGCGATTTCTGATATCTCCGACGACGAGTTCCGAGACGCTTGTTGC TATTCGTCCTTTGCCAGAAATATTGATTGGCAAGGAAAGGGAAGGACCAT GCGGATGGTATATATATATATATATATATATATGACTAAATTGCATTTTC CCTCATCGTCCCGTTCTATGGCATCCTCCTCGTCATCCTTACATGTATGT TGTATCATGCATCAATGCTACACCGACGTTCGTTTCTTTTTCCTGGTGTC ATTTACAAACAAAATGATGACCAGCTGGACGGCGACAGAATGGCGCCGAG TAATTCGAAGATGTCAGCAAATAGCAAGCGGGGCTGGGAGCAAGCTTCCC CTTCTGATTGGATTAGATTCCGTGCATGGTGCTAACTACGTCGAGGTGAG TCACTACCGTACAAAATACTACCCTCAGAGTGTAAGTGTGAATTTTCCTG TATGCGCTTTGACGATACCTTATCGATTTTAGGCACTGTACTAGGTACTC CTTTAGTTTCACGTATAGCTCTAGCTCTAGCTCTAGCTCTAGCTCTAGCT CTAGCTCTATCAGTAGTCGTCAATTTTTCACTGTTGCGAGTTGCGCATGC AGCATACTCAACTATTAAAAATTTAGCGGCGCGCGTATCAAACATCCATA TACACAACAAATCATTACGCACCACCACCACCACCATCACCACGCACGCA CGCCTCCTCCAATCCACCTTCTCCCTCTCCCGGCTGTTTCCGCAACCATG GTGATGCAATAGGGAGCCGTGATTTTTCCTCAACAGATCGCTTTAGCAGC AACTTTCAATCCGAAGTTAGCTGGAGAGGCAGGCCGGGTGGCCGCTCGAG ACACGAGAGCGGCGGCAGTACCCTGGCTATTCTCGCCTATCTTAGGCCTC GCCACACAGCCCTTGTGGGCTCGCACGTACGAGACCTTCGGAGAAGATCC CTTTCTGGCCTCCAGAATGGGGTCGGAGTTAGTGAAGGGCATCCAGGCGT CTTTACCCGGGGGCAGAGATGCAGACGACGGAGAGCCCTTGAAGGCGGCC GCGTGCATGAAGCACTTCGTAGGGTATAGTCACCCGACCTCTGGTCACGA TCGCTCCCCTAGTCGGATCCCCGAGCAGGAGTTACTAGAGATGTATCTGG CGCCGTTTCAGGCGGCCGTTGAGGCTGGCGTGGTCTCAGCCATGGAGAGC TACAACGAGCTGAACGGCGTTCCGGTAGCGTCGTCGAGGAAGTACCTCGT GGATGTGCTCCGCGGACGCTTACAGTTTTTGGGGATGCTGGTTACGGATT ATGCAGAAATTGTGAACCTGGATAACCATCACGGCGTGTCCGGAAGCCCT GAGGAATCGGTCGGGATGGCCATGCGCGATACGAGCATTGATATGTCTAT GGTGCCCATGGACCCTAGCTTTACGGAGGCGCTGTTGGCGCTGGCGAAGG CTGGGACTGTGTCGGAGAACCGGATCAACCGCTCTGTCAGGAGGATACTA TCACTCAAGGTGACCAATCAAGTGTCTGATTGAGGAATCGTTGTCTTGTT GTACACTAGGGGGTGAAGGATTATGTTCGATAATATATATTAATTACCTT TTCGACAGTGCAGCGTCTGGCGTCTCGATAACGACATCCATTTGGGAAAG AAGAAAATTAGTTAGTTTTTTTGGGTTTTTTTCAAGCGTGCCTGTTGATT GTGCTTCCAGGATTTTGTTGGAACTGTGATACACTCGTGAATCATTCATA CAACGGACACTGTCATATCCTCGCATAAGTGCCTGTTTTGGCCATGAGCG ATGCGATGATTTCATGTAGAGCCGGGTTTTCTTAGTTTGTCGGCAGATGC TTCCCGATTATTCGTCCAGGGCGTCTATGATTCATTCGCCAGGTCATCGG CCGAGGTGACTCCATCGATGCAAAGACACTGGAAATTTCATAACAACTGA GGTTGTACTTGCGCTTTCTAGCGCCTTGATTAGCAAGACCAAATGCATCC GAGTAGAGTGTTCTTGAGTTCTTTGTAGGTACACCGTTGATCCGAGCGAG CGACGGATGCTTGTGATCAATATTATAAAGAAGACTAGCCCTCCTTGTGC TCTATGTTGTCTGCAAATAGTCGGGGTCAAGAACTCATTTATTATTTGTC ACCAGTAAGGCACGCCTTGTAAACCCCTCTCTGTTCGGATTTTGATGCAG TCATTGAGTGGGACTGTCAACTATCGTTGTTGTTTCCGTTTCGATGCAGC GTCTGGCGCTAGAAGGGTTCAAAGTGTTAACCCCCCGGTCAAAACCCGAG TGGAGCATGGGCAACTATCTCGAACTGTCATTTTTTTGGTCTTGCGTGGA CACGTATTTATTCGTCTACAAGTCTGTGAATGGTCACTTTACGAACAGTC ACCAGGTTGTCGTATACCCGGCGAACAGTCACACATGCAGGTCGTGTTTG CTTTCCGGGTGGCACTGTACAGATTGAATACCCTATCTGTCCGAGCTTTC CGATGCTCCACGGTATATCGAGTACACTGCATATTATTCGCGTCACATGG ACATCTTCTGTGGGTTATTTCAATGATGGGGCAGGACATAATCCTGCTGG TCATTGTAGTAATTGAGCAGTCTTTGTAAGAATTGAGTAGTCTTATGTTG CTGCCGGTTATCATGATGATTAAGCGGGATGTATTCCTGCCGGTCGTTAT AATAATCGAGCAGTCGGGACATCTCGTTTGTTATCATGAATTAACTCGAT GGCCGTGGCGGGTAGGTTCGCGTAGACCTGTATAAAGATTACCATACTGT TGCGATGGGAACCCGAATACCTTCGCTTCGTCGTATTGATGGTTTTACGG GTATGTCAGCTGCTGTCGGTGACGGTGCAACAAGCGTATTAACCCTTTGA AGTTGATGATCGTATGAACATGTAGTTGAAAACTATTAATGGGTCAGAGA ATCTCATGAGGAGGCGATATAAACCGTTGTCGTCTGCTCATATAAAAAGA AAAATGTGCTCCACAGTTCCTGGCTAGAATTACAATATATTTGTACTGTT GTTGTGTGTCATGTTTTGGATACACGGCAATACGAGTGCGCTCGCGCGCT CGTCCCCGAAGAAGGAAACCTACCGGCTAATGCCAAACGAGAACACGATG CTTCCGGGAGAGACTGGCTCTCGAGGGGACCCCGCCTGCTCTATGCGGGT CGGTTCTAGGTCTTGAGATGTAATGCGGAGCAAGCACTTGGGTTTTGTTC TGTCGTAGATGGAGTGACCATCGAGGGTCGGACACAGCTAGAAAGCTGTT CCGAGAAAGGGACAAAAGGCATTCGTCGTTGTGTAGGGGGTCGGGGCTCA GGAACCCCAGGAACGTCAGAAACGTGCTCTCCACTAATTTGGAAAAAAAA AAAAATGGATACAAGTTGACAGATTACTTGGCGAATTAACGTCTTGCTCT GCTGGATGGCAATTTCTGGAGTGGGCGTGGCTGGCTATGTTTCTTCTATT TCAGTCTCACCCTGTGAAAGGTCGCGTTCATCGTACGCCATATCGCGAAA CCTGTTAGTCCATATCATTTCGTTTGCTTGAAGCTCATCAAATTCACCGT CATTTCAAGGTGTGTTATATTCTGTGGACAGTACTGTAATACCGAGGTAA AAATGACGCGGTATTGCGCTGTATTCTATATTCGATACCTATACCAATAT CGGGAGGAACTCGATTTCCCGTTTACCGTTGCTGTGCACGGCATGGCAAA ACGTGGTTATCGCGGTGTCAGAGCCGTATCCTGTTTACCCTACCGTGAAA CCACGTTATCGTACCGTTAGCGTATCGTGAAAAGTGCTCATGACCGCGGG TCTGAGATGACTGGATTCGCCAGAGAAGTGATGGCGGGTTTGATTGGAAC CGGGTTGGTGTTTTAGTGTACCGCAAAACCGTTGTGTCGTGATTCACGGA CTAGCTCGCTCAGTGGTGGTCATCAGACATCCGTCTTTAGCATACGTTTA GAAGGAGTGCGGCAGCTGCTGGCGATGGCGGCTCGAACACTCCTGGCTCT GCATCGTGCAAGTTCTGCTTTCTCGCGAGATGGTGGCGGTGCTTCCTCCA GCCCTGCCAGGGAAAAAGCGACTCTCCCTTTCCAGAGCGGCTCAGTTTTT TCCATCCTTTTCTTTATTTAGTGAACATCGAGTTTTCTCATAAAACTAGT TCAACGTGTTGTCCATTGTAACGCAGTTTGCTTTGGGCAATTTGTTTTTC AGTTCTCTGCTATTTGTTTTTTTTTTGTTTGCGACGATCATGCGTTATAC TTGTAGATGTGTCATCACATTCTGACTTGTGCCGAACAAGGAGGCGATTG TAATCAACTCGAGAATTGTGTCATATGTTTGGTGGCATGACTATAATTCT AAAACAATTCTTTGTAAATCCTTGGAACAGACTCACAGAATAAATGCGTT GTCTGAAGCTCCCCGTACACATCGTTTGCTTGACGCATGTGGGTTTCATG GCTTTTTTTTTGTATCTTGCCCCTGTGCAAGGCTTGGACACCGAAATAAT GTGCCAAATACCAGACATCGTACCGCATGATACCCAGAAGACAAAATACC GTACAGCGGAGGGAAAACCGAATACTACTTACCGCGCAAAATACCCCTAC CCGCCCCTCAACTACCAGCTTCGTCCTCGTGAAGACGCGTGGTTAATGAT CGAATAACTACCGCACGCCAAACATGACTACGCCTCGACACCTCTAGTTT GATGAGTTTGTGGATAATAACCAAGTAATCCAGCATGCTGAGCCCACCTC TATAACCCCCCCCCCCCCGTCCGACCCCCGTCCCCTTCCCCTCTTCTGAC CGCTTCCTTCGCCGCCCTACCTAGGAATCCGTTGGACTGCTAGATACCCC GCTGCCGTCTAACCAGTCGCCCTTGATAGCCAAGGTGGGGAGCTCACGAG ACAAAGAATCCGCCCTTCAGGCGTCGAGAGAAGCCATCACCCTTCTGAAA AATGACGACATGCCTAAGCGAAACGATGGTGATGCTGGCGGGCCGGCGCT GCCTCTTGATCGCTCTAAGGTGTTATACTCCAAGATACTCGTCGTGGGGC CTGCATGCGACTCGCTCAGCCTACAGTCTGGAGGGTGGACGAAGCACTGG CAGGCGAGAGAAAAGAGTGAAAGATGACCCTGTAGTAGCACTAGTAGATG CTGTACATGGAGAATGACAAAACGACACAAAATAATACTTCGGTGGGAGA ATGGAGAGTGAATAATGTTTCTGTCCACAAACTCACTAGACTTGGAGAGG TATGCATGCATGCACACCAACACTGACCAGTCACTACTAATGACTATTAC GGAGGAACATAATAATCAGGAACATTTTTTTTGTTTTTTTGGAAACTTTT TTTTTTTTTTTCTCCGTTAGTCCTACAGAATTTCGCTTCTAGCTGAAAAC AAAAACACGCTCTAAAAACACTTGCACAGGCATGCAGCAACCGATTGGTG CATATCGTATTGCATGAGTTACACCTCAAAATGTCAATTTTTTTATTTGC TCCTGATTATTATGTTGCTCCGTAATAATCACCCAACACTGATCAATCAG GGTGCGTTCAAGGAGGAAGAGTTTGCTCCCCAGGAGGGACGCACGATCCT ACAAGGAATTCGAGGCCTCTTGGACCCGAGCACGTTGGAGAAGGGTAATG CGAATAGCGGGGGTGGGGATGAACCGTCCCCTAAATCTTCAGGAACCAAC GCACGGCGCAGGCAGGAAGAGGAAGATATGAAGGTTACGGTTGTATTTAA GAAAGGGGTGTCGGTGGACGGAGCAAACGAGGACGATCGAGACGAAGCGT TAAGCGAGGTGGGCCAGGGGTAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig9547:561..6633-

>mRNA_H-paniculata_contig9547.17268.1 ID=mRNA_H-paniculata_contig9547.17268.1|Name=mRNA_H-paniculata_contig9547.17268.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3096bp|location=Sequence derived from alignment at H-paniculata_contig9547:561..6633- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTCAGCTGGACCTAGCGCTCTTCGTCTCTCCAGAGAACGGGGAGCT
GGACGAGCAGAAACTGATCGACTGGATGACCAAGTATCGGATAGGATCTT
TGTTCAACTCGCCCTTCGCAGGGCACGTGGGAAGATGACTCAGCTGGACC
TAGCGCTCTTCGTCTCTCCAGAGAACGGGGAGCTGGACGAGCAGAAACTG
ATCGACTGGATGACCAAGTATCGGATAGGATCTTTGTTCAACTCGCCCTT
CGCAGGGCACGTGGGAAGCTGGACGGCGACAGAATGGCGCCGAGTAATTC
GAAGATGTCAGCAAATAGCAAGCGGGGCTGGGAGCAAGCTTCCCCTTCTG
ATTGGATTAGATTCCGTGCATGGTGCTAACTACGTCGAGCTGGACGGCGA
CAGAATGGCGCCGAGTAATTCGAAGATGTCAGCAAATAGCAAGCGGGGCT
GGGAGCAAGCTTCCCCTTCTGATTGGATTAGATTCCGTGCATGGTGCTAA
CTACGTCGAGGGAGCCGTGATTTTTCCTCAACAGATCGCTTTAGCAGCAA
CTTTCAATCCGAAGTTAGCTGGAGAGGCAGGCCGGGTGGCCGCTCGAGAC
ACGAGAGCGGCGGCAGTACCCTGGCTATTCTCGCCTATCTTAGGCCTCGC
CACACAGCCCTTGTGGGCTCGCACGTACGAGACCTTCGGAGAAGATCCCT
TTCTGGCCTCCAGAATGGGGTCGGAGTTAGTGAAGGGCATCCAGGCGTCT
TTACCCGGGGGCAGAGATGCAGACGACGGAGAGCCCTTGAAGGCGGCCGC
GTGCATGAAGCACTTCGTAGGGTATAGTCACCCGACCTCTGGTCACGATC
GCTCCCCTAGTCGGATCCCCGAGCAGGAGTTACTAGAGATGTATCTGGCG
CCGTTTCAGGCGGCCGTTGAGGCTGGCGTGGTCTCAGCCATGGAGAGCTA
CAACGAGCTGAACGGCGTTCCGGTAGCGTCGTCGAGGAAGTACCTCGTGG
ATGTGCTCCGCGGACGCTTACAGTTTTTGGGGATGCTGGTTACGGATTAT
GCAGAAATTGTGAACCTGGATAACCATCACGGCGTGTCCGGAAGCCCTGA
GGAATCGGTCGGGATGGCCATGCGCGATACGAGCATTGATATGTCTATGG
TGCCCATGGACCCTAGCTTTACGGAGGCGCTGTTGGCGCTGGCGAAGGCT
GGGACTGTGTCGGAGAACCGGATCAACCGCTCTGTCAGGAGGATACTATC
ACTCAAGGGAGCCGTGATTTTTCCTCAACAGATCGCTTTAGCAGCAACTT
TCAATCCGAAGTTAGCTGGAGAGGCAGGCCGGGTGGCCGCTCGAGACACG
AGAGCGGCGGCAGTACCCTGGCTATTCTCGCCTATCTTAGGCCTCGCCAC
ACAGCCCTTGTGGGCTCGCACGTACGAGACCTTCGGAGAAGATCCCTTTC
TGGCCTCCAGAATGGGGTCGGAGTTAGTGAAGGGCATCCAGGCGTCTTTA
CCCGGGGGCAGAGATGCAGACGACGGAGAGCCCTTGAAGGCGGCCGCGTG
CATGAAGCACTTCGTAGGGTATAGTCACCCGACCTCTGGTCACGATCGCT
CCCCTAGTCGGATCCCCGAGCAGGAGTTACTAGAGATGTATCTGGCGCCG
TTTCAGGCGGCCGTTGAGGCTGGCGTGGTCTCAGCCATGGAGAGCTACAA
CGAGCTGAACGGCGTTCCGGTAGCGTCGTCGAGGAAGTACCTCGTGGATG
TGCTCCGCGGACGCTTACAGTTTTTGGGGATGCTGGTTACGGATTATGCA
GAAATTGTGAACCTGGATAACCATCACGGCGTGTCCGGAAGCCCTGAGGA
ATCGGTCGGGATGGCCATGCGCGATACGAGCATTGATATGTCTATGGTGC
CCATGGACCCTAGCTTTACGGAGGCGCTGTTGGCGCTGGCGAAGGCTGGG
ACTGTGTCGGAGAACCGGATCAACCGCTCTGTCAGGAGGATACTATCACT
CAAGGAATCCGTTGGACTGCTAGATACCCCGCTGCCGTCTAACCAGTCGC
CCTTGATAGCCAAGGTGGGGAGCTCACGAGACAAAGAATCCGCCCTTCAG
GCGTCGAGAGAAGCCATCACCCTTCTGAAAAATGACGACATGCCTAAGCG
AAACGATGGTGATGCTGGCGGGCCGGCGCTGCCTCTTGATCGCTCTAAGG
TGTTATACTCCAAGATACTCGTCGTGGGGCCTGCATGCGACTCGCTCAGC
CTACAGTCTGGAGGGTGGACGAAGCACTGGCAGGCGAGAGAAAAGAGAAT
CCGTTGGACTGCTAGATACCCCGCTGCCGTCTAACCAGTCGCCCTTGATA
GCCAAGGTGGGGAGCTCACGAGACAAAGAATCCGCCCTTCAGGCGTCGAG
AGAAGCCATCACCCTTCTGAAAAATGACGACATGCCTAAGCGAAACGATG
GTGATGCTGGCGGGCCGGCGCTGCCTCTTGATCGCTCTAAGGTGTTATAC
TCCAAGATACTCGTCGTGGGGCCTGCATGCGACTCGCTCAGCCTACAGTC
TGGAGGGTGGACGAAGCACTGGCAGGCGAGAGAAAAGAAGTTTGCTCCCC
AGGAGGGACGCACGATCCTACAAGGAATTCGAGGCCTCTTGGACCCGAGC
ACGTTGGAGAAGGGTAATGCGAATAGCGGGGGTGGGGATGAACCGTCCCC
TAAATCTTCAGGAACCAACGCACGGCGCAGGCAGGAAGAGGAAGATATGA
AGGTTACGGTTGTATTTAAGAAAGGGGTGTCGGTGGACGGAGCAAACGAG
GACGATCGAGACGAAGCGTTAAGCGAGGTGGGCCAGGGGTAGAGTTTGCT
CCCCAGGAGGGACGCACGATCCTACAAGGAATTCGAGGCCTCTTGGACCC
GAGCACGTTGGAGAAGGGTAATGCGAATAGCGGGGGTGGGGATGAACCGT
CCCCTAAATCTTCAGGAACCAACGCACGGCGCAGGCAGGAAGAGGAAGAT
ATGAAGGTTACGGTTGTATTTAAGAAAGGGGTGTCGGTGGACGGAGCAAA
CGAGGACGATCGAGACGAAGCGTTAAGCGAGGTGGGCCAGGGGTAG
back to top