Homology
BLAST of mRNA_H-paniculata_contig9543.17266.1 vs. uniprot
Match:
D8LBJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ4_ECTSI)
HSP 1 Score: 92.0 bits (227), Expect = 7.390e-19
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 3
Query: 153 MGIIRLTTGASLGILFKATVNSMRLVPLRREPWEYVMCAGVAGYVATQLPQWEQQMLDDINEIRADRYMPPIVSTPAFGVGLPVT 407
MGI +T G + GI+ K TVN + V LRR PWEYV+ AG+ YV ++PQWE ++ DINE+RADR MPP + G +T
Sbjct: 1 MGITAMTVGGAFGIVAKGTVNRLMKVSLRRAPWEYVLGAGIGAYVGNKIPQWEATLISDINEMRADRNMPPATRVGGYEFGSSIT 85
BLAST of mRNA_H-paniculata_contig9543.17266.1 vs. uniprot
Match:
A0A7S2V622_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V622_9STRA)
HSP 1 Score: 73.9 bits (180), Expect = 2.480e-12
Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 3
Query: 189 GILFKATVNSMRLVPLRREPWEYVMCAGVAGYVATQLPQWEQQMLDDINEIRADRYMPPIVSTPAFGVG 395
G+ KA NS+ VPLRREPWEY+M + YV ++P+W+Q ++D+INE+ +R +PP+ F +G
Sbjct: 18 GVALKAMTNSVMKVPLRREPWEYLMFGALGAYVGYKMPEWQQNLIDNINEMHEERGLPPLDVDGQFSLG 86
BLAST of mRNA_H-paniculata_contig9543.17266.1 vs. uniprot
Match:
A0A835ZFJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFJ2_9STRA)
HSP 1 Score: 66.2 bits (160), Expect = 7.500e-10
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 3
Query: 153 MGIIRLTTGASLGILFKATVNSMRLVPLRREPWEYVMCAGVAGYVATQLPQWEQQMLDDINEIRADRYMPPI 368
MG++ G + G+ K NS+R VPLRR+PWEYV+ A + Q+P WE+ + + +N RA R +PPI
Sbjct: 1 MGLLYTLGGGAAGLGLKWWTNSVRKVPLRRDPWEYVLYAAAGAALFRQIPIWEKNLTEQVNTKRAARNLPPI 72
BLAST of mRNA_H-paniculata_contig9543.17266.1 vs. uniprot
Match:
A0A1E7EW66_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EW66_9STRA)
HSP 1 Score: 63.5 bits (153), Expect = 1.080e-8
Identity = 30/85 (35.29%), Postives = 49/85 (57.65%), Query Frame = 3
Query: 153 MGIIRLTTGASLGILFKATVNSMRLVPLRREPWEYVMCAGVAGYVATQLPQWEQQMLDDINEIRADRYMPPIVSTPAFGVGLPVT 407
MG+ + G SLG + N+++ +P R+PW +V+C Y AT+ ++ +L D+NEIRA + +PP+V T F +P T
Sbjct: 1 MGLTTVVVGGSLGFAAQCISNAIQKIPTSRQPWMHVLCTVGGAYGATKWVSAKEDLLADVNEIRAYKGLPPMVGTRTFFPFVPPT 85
BLAST of mRNA_H-paniculata_contig9543.17266.1 vs. uniprot
Match:
K0R0Q8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0Q8_THAOC)
HSP 1 Score: 63.9 bits (154), Expect = 1.080e-7
Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 3
Query: 153 MGIIRLTTGASLGILFKATVNSMRLVPLRREPWEYVMCAGVAGYVATQLPQWEQQMLDDINEIRADRYMPPIVSTPAFGVGLPVTK 410
MG+ GA G N+++ VPL R PW +V C + GYV + + E++++ DINEIRAD+ MPP+V+T A +GL K
Sbjct: 136 MGLTAFFVGAFSGTGMHMMSNAIQKVPLSRRPWMHVGCFFLGGYVGQRWVRLEKELVLDINEIRADKGMPPMVATDAM-LGLKYQK 220
BLAST of mRNA_H-paniculata_contig9543.17266.1 vs. uniprot
Match:
A0A1Z5KC63_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC63_FISSO)
HSP 1 Score: 59.3 bits (142), Expect = 3.160e-7
Identity = 25/75 (33.33%), Postives = 46/75 (61.33%), Query Frame = 3
Query: 153 MGIIRLTTGASLGILFKATVNSMRLVPLRREPWEYVMCAGVAGYVATQLPQWEQQMLDDINEIRADRYMPPIVST 377
MG+ G SLG +A NS+R VP+ R+PW ++ + Y + P+WE+ +++DIN +R+++ + P+V +
Sbjct: 1 MGLFTTLFGGSLGFAAQAYSNSIRKVPISRQPWNHLGMFILGCYAGAKYPEWEETLVNDINAMRSEKGLSPMVGS 75
BLAST of mRNA_H-paniculata_contig9543.17266.1 vs. uniprot
Match:
A0A6V1ZZJ3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V1ZZJ3_9STRA)
HSP 1 Score: 58.9 bits (141), Expect = 5.050e-7
Identity = 26/77 (33.77%), Postives = 46/77 (59.74%), Query Frame = 3
Query: 147 QNMGIIRLTTGASLGILFKATVNSMRLVPLRREPWEYVMCAGVAGYVATQLPQWEQQMLDDINEIRADRYMPPIVST 377
+ MG++ G +LG + N + +P R+PW +V + Y A + Q EQ+++D+INEIR+D+ MPP++ +
Sbjct: 16 EKMGLVATLVGGTLGTSVQLVTNGVMKIPYSRKPWLHVTYFFLGAYGAHKYLQVEQRLVDEINEIRSDKGMPPMIGS 92
BLAST of mRNA_H-paniculata_contig9543.17266.1 vs. uniprot
Match:
A0A6H5JVS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS4_9PHAE)
HSP 1 Score: 64.7 bits (156), Expect = 5.250e-7
Identity = 26/54 (48.15%), Postives = 35/54 (64.81%), Query Frame = 3
Query: 246 PWEYVMCAGVAGYVATQLPQWEQQMLDDINEIRADRYMPPIVSTPAFGVGLPVT 407
PWEYV+ AGV Y+ ++PQWE ++ DINE+RADR MPP + G +T
Sbjct: 591 PWEYVLGAGVGAYIGNKIPQWEATLISDINEMRADRNMPPATRVGGYEFGSSIT 644
BLAST of mRNA_H-paniculata_contig9543.17266.1 vs. uniprot
Match:
A0A7R9ZF43_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZF43_9STRA)
HSP 1 Score: 58.9 bits (141), Expect = 7.940e-7
Identity = 29/78 (37.18%), Postives = 42/78 (53.85%), Query Frame = 3
Query: 153 MGIIRLTTGASLGILFKATVNSMRLVPLRREPWEYVMCAGVAGYVATQLPQWEQQMLDDINEIRADRYMPPIVSTPAF 386
MG+ + G G N+ R VPL R PW +V V Y + E ++L+DINE+RAD+ +PP+V TP +
Sbjct: 28 MGLTAMLVGGVSGTSMHLLANAARKVPLSRSPWFHVAYFFVGMYAGQKYVTVEAKLLNDINELRADKGLPPMVGTPGY 105
BLAST of mRNA_H-paniculata_contig9543.17266.1 vs. uniprot
Match:
W7U3Y1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3Y1_9STRA)
HSP 1 Score: 52.0 bits (123), Expect = 8.480e-5
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 3
Query: 177 GASLGILFKATVNSMRLVPLRREPWEYVMCAGVAGYVATQLPQWEQQMLDDINEIRA 347
GAS GI K NSMR +PLRREPW+Y + V +V + E+ + + +NE RA
Sbjct: 9 GASFGIFVKLASNSMRKIPLRREPWDYPIFMLVGAWVGYKYVALEESLRERVNEKRA 65
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9543.17266.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 10
0 1 Expect = 7.39e-19 / Id = 48.24 Expect = 2.48e-12 / Id = 43.48 Expect = 7.50e-10 / Id = 41.67 Expect = 1.08e-8 / Id = 35.29 Expect = 1.08e-7 / Id = 40.70 Expect = 3.16e-7 / Id = 33.33 Expect = 5.05e-7 / Id = 33.77 Expect = 5.25e-7 / Id = 48.15 Expect = 7.94e-7 / Id = 37.18 Expect = 8.48e-5 / Id = 43.86 Sequence D8LBJ4_ECTSI A0A7S2V622_9STRA A0A835ZFJ2_9STRA A0A1E7EW66_9STRA K0R0Q8_THAOC A0A1Z5KC63_FISSO A0A6V1ZZJ3_9STRA A0A6H5JVS4_9PHAE A0A7R9ZF43_9STRA W7U3Y1_9STRA back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9543.17266.1
>prot_H-paniculata_contig9543.17266.1 ID=prot_H-paniculata_contig9543.17266.1|Name=mRNA_H-paniculata_contig9543.17266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
MGIIRLTTGASLGILFKATVNSMRLVPLRREPWEYVMCAGVAGYVATQLP back to top mRNA from alignment at H-paniculata_contig9543:1054..6652-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9543.17266.1 ID=mRNA_H-paniculata_contig9543.17266.1|Name=mRNA_H-paniculata_contig9543.17266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5599bp|location=Sequence derived from alignment at H-paniculata_contig9543:1054..6652- (Halopteris paniculata Hal_grac_a_UBK monoicous)GTCTCGTGCGGTGTGGGTTGCAGAGCTCCCAGCAGTTTATTGTGGGAACG
TAGTTTACCTAGTGGTACCCTTGGATCGGAAGTTGGCACCGCCTCGACTT
CCTGATCCCCTACGACGAAGTGGGTGCGGCGCATTCCGATACGTTGCAAA
AT ATGGGAATCATTCGCCTCACTACAGGTGCCTCCTTGGGCATATTGTTC
AAGGCCACCGTCAACTCGATGAGGCTAGTTCCTCTACGCCGAG GTGGGTT
GCGAGTGATCACTGAAAACCACGCTTGATTTTTTAATATACGTCCATGCA
GTGAGTGCTAGTGACAGCTAATGCGTGCCCTGTCATCGAGGAGATTCGGT
TTTGCACATGGTTTGCGTATATGTTATGTGCTGTGAGGTCTCCACAACAC
GAATCAGGGTGAACGATTCACATGTCAGATGGGGTGCAGAGCGATACTCT
TGGTTTCTTGAACAGGCTGCAAATCCAGACTGCGCACCGATGTCTGCACT
ACCGCAGAATGATCATTCTACAGCGAAGGTGATGCTTTCTCGAGATGTTT
TTGTTTTTTATCAAGAATTATCTGAGGGCAATATAATCTATACCATGGGC
CAGGTTGACGGATACACGGGAGTGCACGATGTGTCCGACAGGGTCACACA
GGAAGTAAGTGTAGAGCAGAGGGCGTCCAGCGCATGAGGGGATGTAGCGA
AATCTTCCGTTCTTGCACAGTACAGTGCAGTACACAGAATGCTGTGCTAT
GAATACGTAGCCCGGTGCCAACGAAGGACAGGTAGGAGATTTTTTTTCCC
ATCACGTATGTTGGAAAGTTCTTGAATTGGGCAAATTGTTCGCTCGTCAA
GACCATGTCGAACATCGTCATTCTGACAGCACAGACGCTTAAGCACAGCT
TGTCGACAGTCTTCGTACATGATTTATACAAGCATCATAGACAGGATATT
GGTGCTGAGAAAGCGGGAGAAAAATGCCTAAACCTGTGAAAGAAATATGA
TGCGATTACTCTACCAAATACGGTTCGAACATTGTCAAGACACTGATTGG
GCAACGCCCGTCTATCCCGTCCTTGACCTCGTACGTCAGCTTCCTCTCCA
TGAAGCTTCATTATTTTCGACATGTATAAAAAATTGAAAAATTCATCCGA
AACGACGGTCACCACTACCCCAGATTGAAGTACTGGTCATTTTTGTGTAT
CCTTTTCCTAAATTAAGTCTAACCGTGTTGATTTCATGCAAAATTCAGAG
TTTTTTTGTTTGTGAAGGAACTGCAATGGACGGGACCATTAGAAATTTCA
ATTGTCACCGTTTCGACGTATCTTGGGCCTAGTCTTCCCGAGATTTTTTT
TTTTCGTCAGATTCAGGGCAAAGCCGAGTTTGGCTGGAAGGCCTGTGATG
AATTGACAAACTACCTCTAATGCTTGTCGCTGCTGGTCATGGTTCCACCA
TGCCAAGCAATTGATTCTGCTCAAATCCAATCGTTGGGGTCAAAAAATGA
AGAACAATCATAGCAAGACACTGCGACCAGAGAAGCGAAAGACGATGAAG
TGCAACATGTGACACAGGCGAGCAGCACAGCGGATGTGTCCGTCCCTCTC
CCGGATTTAGCCCAAAGTGGTCCGGATCGTAGCTCTTGATCAAATGATCC
CCGTACACTTGGTTTAGGTAGCATCAGTCCAAGTCTGGAAGAGGTAAAAT
TGTAATTCGTGGGCAACCAGCCAAATAGACCGGACCTAAAGCGGAACTCT
TTGATAAGTGTACCTTCACGTATACTGCCGTAGCTCCCTCAGTACAGGAT
TGACTCCCGTGATACCAGGCCGGGCACGTGCAGATGGATAAAGGCTATCG
TGCATGCTAGTGCGCCTGCACTCTTGTCTCTCTCTGTGCTTGTCACTTTG
AGGCTCTGGGTGGTATTCCTGAGTCCCTTGTTTCCTGAAACCTGCGGGAC
CTTGCTGGCCTCAACCACTTTTGCAACAGTCTGTACAGCGGTGCAAACCT
CGACACGTTCGGGCGAGAATCGATTTGATACTGTTGACAAGACTCGATTT
TAGACCGCATCTTACGGTCATCAGAGACTTGGTTTTCCACAATCGCTATT
TTCAAGTTTTTGACGGAAAATTACCCGACGCGAAATTGAACAAATGATTA
TCGTGGCGAGCTAGCTCATGGCGAGATTCGAAATTTTATATCATGGTGAT
ATGGAGCCACCGGGTAGATACGTGATTAACACGCGCTTTGTCTGGATGTT
TTGTTCTCTGTAGTTGTTTCGTGAAATTTAGCAACGAGAGGTTTGGACTA
TGGCAACAATACCGCAGTTTATCTCAGCGATGTCTTGTTGACAAGTAATC
TGAAGTATATCATCCTAGTTGACAGATGATTTGTAACCGTCCGTACTCAC
TGTCCCGATCGCGCAAAGAGTTTGGGAGGAAATGGAATGGTGCTGTAACG
TTGTCATACCCATGTCGACGGGCGGGTCTGCACTGGGTTTGTGCATAGAG
AATGTCTCGTCGCTTATCGATCTGCACTGGGATATGCTAGTATAGTGGTC
AGTCTCCGCTACTCGGGAAAAATTAAACGGTTACGGAAGATGGGTCGTTT
TTTGGCATATTTCCAGAAGAGAGGGCCTGATCTTGGGCTCGTTGATTTTT
TTGTCACGAACTGGAACAAGAAAAAGAATAAGAGTTGTTTCAAGCTTTGG
AACACGATTGTTCGAAGATGCAGCCTTCTCGGCGGAATCAGTCAGCATTT
TCGTGGCCCCATTCTACACTACTGAAGATGCAGCAACGAAGTATCGTCCT
CGTCGAACCTCGTGGACGTCATGAGTATCAAGTTCCACCCAACAAGACGT
TTTATCCGTCCGCAACCCAAAGCCCTTGGAGAAGTTATCCGACTTCGAAT
CTAACCTCAACGAAAGAGTTTCCCTGACGGGCTTAAAAATGGCTATAGGT
CGGTTTTCGTGTTTTCTCTTGGTGATTATTCGATGGGACGTGCCCTCAAA
CCGTGTTATGTTGCTACCTTTACCGCCAGAATTCTTTCAGTTGCAGCCGC
TTTACTCTTTGAGCACATCCCATTCACTCATGTAGTCGTTCCTAATAACG
TCATGAAAAAATACACCTCGCATACTTTAAAGGGTCCTGCTGAACCAACT
TTAGCGATGAGGTGATCAGAATACGCCACAGTTGATCTTGGGTCGGCCTC
GGGCGTTGCATAAGCGCTTAGCGCATGATTTGTGTGTGGATGCAGCCCGC
AATGCCCGTGTCTGTCATCTAGCTATGCGATGCTATTTGATGCAGCAGTG
CATCTGAGCGAACTTGTTGAAATTGGGAGGTCAACTACTCCTGACTTGTG
TGTCTGGCGTGTAATGAGGTAAAATTATTCCAGCACCGTGACGTGCATAC
AATCCGTTCTATTTGCACAGGCTTGGACCTTCTCTGATTCTGCTTTCTTT
TTTCGCCTTTTCCCTTTCCCGTCTTCGACCCCTCCACCCTGCAATCAGAG
CCATGGGAGTATGTGATGTGTGCTGGAGTAGCTGGATATGTGGCAACACA
GCTCCCACAATGGGAGCAGCAAATGTTAGATGATATTAACGAGATACGGG
CAGACCGCTATATGCCTCCGATCGTATCTACGCCCGCATTTGGCGTGGGG
CTCCCGGTGACGAAGGAGGAGACCGAGTCATGA CTGTAGCCAGCTTCCAC
GAGGCGAGAACGTAGATGGTGTCTTCAGGATTCGGTTCAAGGAGCGGTAC
GGACTCTTTGCTCTCTTCGGAAATCGAATTAATAACGGGGGATTCGGTAG
CCGACGCGCGATTTGTTGAGGAGATCTATGGCGCTAATGGCATCCAGTAG
TTCACGAGCGCTCGCTGCCGCGAGTGGCCCAGCGTCGCGTTTTGACGGTA
ATGTGTCCCTCTTCGCAATTACAACCGAGCCAGACGACCTCAGGGGGTGT
GGCCTCGCCAACATGTTGGCGATGGCTGCCGTTGTGCTTGATTTCACTCT
AGTTTGATTCATTGAGATAATCAATTTCATCTGTATACAGGGGAGGATTT
GAATGATGGCTGTGGGATATTGGGTGTACTGCTCCACCCATGATTTGGAG
AAGCATACGTAATGCTAACGTATTTTTTTTTATTTTGGGTTCATAGGCAA
CCGGACATGGAACGCGTTGAGGGTGATGGTTTCCCCTCTTGCCTGTTGGG
TTATTGCTGTCACGTTTTTCATGGCGATGGCGTTGTTGACCTTGTTGTGG
CGTGCACGAGGTTATCACCAGTCTTCGCGAAATGATTTCTGATACCTAAT
CTGGACCCAATTGCCCATTTTCAGGCAAAATTTGTAACAAGGTTTTTAGT
TCACATAAGGCAAATCAGACATTCATGTTTCTGCGAAAATTCGAACCCTG
CAAAAATGTCGGTACAAAGCTCCATTCCCCTGTGGCATCTAGAATCACGT
GACGTGTGAAGTCGTACCCGTCGTAGATTTGCATGTTGCTTGATATGTTT
TACAACCGGAGCATCTAAGCCGAATCCAGCGGCAATCACTGATGTTGGGA
GAGGGCACATGAGGTGTGTTGGCGCCGTGGGCGACCACAACGTGTTTTGG
GCACACACACGCTTGAGGAGGACCGTAAACATGTCAAAAGGTCCCGATTA
AAAGCTCGATTTGTAATACAGTATCGGCCCAAGCGTGAAAAATTAATCAT
AAAGAAACTAAGGCGCAGTTTTTACCAAACCATTTTAAATAGAGCTCAAA
TTGTGGCAATCTCTGATGGGACCGAATTTTTCCAGTCGATTTGCCCTGCT
TTCCGATTCCTAGAAGGGTGCAAAAATCTGATCTTGACTCGATTCGCGTC
TGTTATTTTTATGGTATGAGGTTTCCCGAAGGTGGTTTTTTATGGAGGTT
TCCAACCGTAGTAGTACAAGCGACATAATTCAAAATTCAAACACACCCTC
CAACGTGGGGTCCTCGAGCACACCGCCCAAGATATCACCCTCGTAAACCC
CACCGCCCAGCACATGATCTTGAGTGTACAGTCAACTGCGATGCATCTTA
TAACAAACCCATGTGTGGAATGGGTGTGGAGTGAGATGAAGCCTCAGGGG
ATCAAATCGGCTGTCAGCAAGGCACTGTGGATGATACTGCCAAGTGTACC
ACTGGTACGGTTGTACTGGTGTGAAGCAGAACGGTGGGACCATGTCTCAG
GCCAACAGGAACAAGGCAGCGGTTGAATTGTACGACAAGATCGCGGTTCA
CAGCTTCCTTCGCTGGGTGGAGGAAGCCCCGGGGCTAGCAGTCCAGTAAG
TTTTCTATAACGACGGGGATCACACACCTTGACTTGCCTGTGTCCTCGTG
GTTGTGTATTGCTATAGGCTGTGACATTCAAATGTTGGATGAAAAACAAC
ATTAACGCCTTCATATGGTGGTGGTCCAAGAAATTCGATACACGAGGGTA
ACGCTGCTTTCTGCCAGAAATTGGGGAATGGTACCGGCTATACCTCCCGC
CCCGGATTTCTCAACTCATATTTCCAAGAAATCTATCTGCATCACAAGGG
AAATCGAATATCTTGGTGTCGAAAAATTTGAAAATGTGCACTCGACTGG back to top Coding sequence (CDS) from alignment at H-paniculata_contig9543:1054..6652-
>mRNA_H-paniculata_contig9543.17266.1 ID=mRNA_H-paniculata_contig9543.17266.1|Name=mRNA_H-paniculata_contig9543.17266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=552bp|location=Sequence derived from alignment at H-paniculata_contig9543:1054..6652- (Halopteris paniculata Hal_grac_a_UBK monoicous) back to top