prot_H-paniculata_contig1274.1726.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1274.1726.1
Unique Nameprot_H-paniculata_contig1274.1726.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1179
Homology
BLAST of mRNA_H-paniculata_contig1274.1726.1 vs. uniprot
Match: D8LCY0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCY0_ECTSI)

HSP 1 Score: 548 bits (1411), Expect = 1.690e-173
Identity = 467/1208 (38.66%), Postives = 578/1208 (47.85%), Query Frame = 0
Query:    1 MLPGTVLHENPRGRGGSREEVVGISWKSSRGSHYAAALVVTGAHRVVVYKAGESRRTHQWSFKPSSSTVFSHATVFLPASSRYVGVQQGASLVTWLEKEQDVKRPLSAKASGPVQAVHACPQLGDVFVVVLVSGAVFLYRGRLDSLARCDPSGEPDNG-------GGGVAAAEVVWSGVRGKRVLVLYKKGAEA-RINIFVLSL------SAKRVPNSGMPAIVSASVTLASSHALPKPSIEAGCTAGTTAD-TLAVISSVDEGAEAYSAAWRTGSDGVLSVAWRSPRGAVWTKVVVSASGAREEFARSLSG--THSTAPAMVACAGGAVA-ALCNGHSPGEKKKSLKKAKSKHGAKGATSNQLVEHASSNGALACRVEVAHQCFPVLAGADGGRLLVHSGG---TRPRLTIWDATYGVLLDDGESPEVTAVTVVEDAGAVAGRKAVSMTVSADGAQLALALGGKVVVCPLPVKETGTLASLLRRKRPATMLTATTTTTIATAADVFRLSANQVFPAVDLGRSSSAAHVLLQKTGVFADEEWEAAVVSPFRAKESAVIKALQDAAHRKDADAFERVLREHLQEQRXXXXXXXRAVPDGEIKAEGRDPEHTTTASGSPTPEVVGKHGGGGVDEGKEFSTDVASSRWEQGRYNRRRALLKGCSCSAQVLSAAIDLCISNPEANLWNALGLLLRSGGVSARNHRGLVAAIMKSGPQELLEEVVLHVPDLPEADVVQILRHFLARAAALARKPEISQRLAQAGQSNSQRGGGGDGYPPTGEVSKTASKGPXXXXXXXAARRRLSRYKADQKGKGAHDSSGGVRDESSQEAKTGDAVESDVNGGGGLGHDGVVGQSSGRGALKRRSTGQRETRVGLREDSEAPTDDPAARAXXXXXXXXXXXXXXXXXXXXXXGIATPTTMVVTINETPSHERNKRTRMVVDGTSSAVPDNDASSPPPHKKSLQSN-GTLANGHGRAHDDCGGTSSESGGVSEEASKSASAEQGRGVVEAMAAEGGREGKTPPNCNQLKTKNKKSVVVHEPAVARAERGVLVALTLPHNEAFLRAALSGLSHGEVIVVLQILTRLLSEGRTREAMGGGVNGKRYAVIEHDHFAGKGAPRARTEAVLSWASAVLDSHFARLAISGSEN--VKHTLKTLQLTASAEGECCDLLCQVRSLVDELGRRHAAAAEEHRRP------KRTLYSVRQLCF 1178
            ML  TVLH++  G  G   +VVGI+WK+   SH + +LVVT AH+VVVYK GE RRTHQWSFKPS++TV SH  VFLP+ SRYVGVQQG++LV+W E EQDVK PLS++A+GP+QAVHACP+LGD FV VL SG V LY+G L   A CD                 G A A+ VWSGV G RVLVL   GA   R+  F LS       S +R       A V ASVTL SSH L KP              T A     D G      +       V+SVAWR+  G VWTK VV A G  EEFAR   G     +  A      G V+ +  NGH          KAKSK  A     NQ      S  A AC         P +A ADGGRLL+HSG      PRL +WD++YGVLL+DG +PE ++      + + +  +AV + VS DGA LA+A  GKV+VCPLP +  GTLASLLRRKRP+      +T        V        FP++DL RS  A+  LL KTG     +WEAAVV PFR  E+ VI++L++AA RKD  AFE VLREHL                                +GS +                      +  R E GR  R+R    G   S+ V+++A++LC++NP+A LW  LG+L+RSGGVSAR+HRGLVA I++    ELLEEV+LHVPDLPE D V+ILRHFL++AA LA   E S   A                              XXXXXXX                        V    S   K G  V+       G G D VV              G++  +VG                                      G+      V    E              DG  + + +N         K++ +N G L+NGH  AHD                                                                +RAERGV VALTLPHNEAFLR+AL+ LSHGEV+VVL+ILTRLL EG+T E  G    G+  A++       +G P ARTE+VL+WA AVLDSHF RLAI G+ +  +  TLK L+  A  E  CC+LL QVRSLVDE+GRRHA                R L+S+R L F
Sbjct:    1 MLESTVLHQSRTGPRGQPNDVVGINWKAPTRSHPSPSLVVTCAHQVVVYKPGEERRTHQWSFKPSAATVLSHPAVFLPSRSRYVGVQQGSTLVSWRESEQDVKHPLSSQAAGPIQAVHACPRLGDYFVAVLASGGVVLYQGGLQRAAHCDAXXXXXXXXXXXXXXSAGDARAKAVWSGVLGDRVLVLENTGAATDRVTTFSLSAGGVGSSSVRRDDACAAAADVPASVTLVSSHILTKPXXXXXXXXXXXXXXTSAAFLGRDSGGSGEGRS-------VISVAWRTSSGPVWTKAVVGAGGVTEEFARHAGGEVVAGSRRATEHNGNGVVSVSSSNGHG-------TPKAKSKKPA----GNQSSVGEGSGAAWAC--------VPAIAAADGGRLLIHSGSGGDASPRLAVWDSSYGVLLEDGVAPEFSSDGGGGGSASRSSGRAVGLKVSGDGAHLAIAAAGKVLVCPLPAQAAGTLASLLRRKRPSPSAIGGST--------VIPAGRGSSFPSIDLSRSVPAS-TLLGKTGAVEAGKWEAAVVVPFREAEAGVIRSLREAARRKDIGAFEHVLREHL-------------------------------GAGSRS----------------------SDGRGEDGRKKRQRG--DGGGFSSAVVASAVELCLANPDAKLWGGLGVLVRSGGVSARHHRGLVAEIVEHASPELLEEVMLHVPDLPEVDAVRILRHFLSQAATLA---EASSDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------VVSVLSPSEKRGVKVK-------GAGGDVVV------------KAGKKMKKVG--------------------------------------GVK-----VAAAGE--------------DGNGAVIHENAXXXXXXXXKTITTNSGHLSNGHAAAHDXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRAERGVRVALTLPHNEAFLRSALAELSHGEVVVVLKILTRLLVEGKTLET-GAKPRGQNAALVA------RGLPPARTESVLTWACAVLDSHFTRLAIGGAADGDLVGTLKALKRAARVEAGCCELLSQVRSLVDEVGRRHAXXXXXXXXXXXXXXXSRELFSLRVLTF 1015          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1274.1726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCY0_ECTSI1.690e-17338.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 549..569
NoneNo IPR availablePANTHERPTHR15633UNCHARACTERIZEDcoord: 38..139
NoneNo IPR availablePANTHERPTHR15633:SF2NUCLEOLAR PROTEIN 11coord: 387..1176
NoneNo IPR availablePANTHERPTHR15633UNCHARACTERIZEDcoord: 387..1176
NoneNo IPR availablePANTHERPTHR15633:SF2NUCLEOLAR PROTEIN 11coord: 38..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1274contigH-paniculata_contig1274:14386..24559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1274.1726.1mRNA_H-paniculata_contig1274.1726.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1274 14112..26136 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1274.1726.1 ID=prot_H-paniculata_contig1274.1726.1|Name=mRNA_H-paniculata_contig1274.1726.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1179bp
MLPGTVLHENPRGRGGSREEVVGISWKSSRGSHYAAALVVTGAHRVVVYK
AGESRRTHQWSFKPSSSTVFSHATVFLPASSRYVGVQQGASLVTWLEKEQ
DVKRPLSAKASGPVQAVHACPQLGDVFVVVLVSGAVFLYRGRLDSLARCD
PSGEPDNGGGGVAAAEVVWSGVRGKRVLVLYKKGAEARINIFVLSLSAKR
VPNSGMPAIVSASVTLASSHALPKPSIEAGCTAGTTADTLAVISSVDEGA
EAYSAAWRTGSDGVLSVAWRSPRGAVWTKVVVSASGAREEFARSLSGTHS
TAPAMVACAGGAVAALCNGHSPGEKKKSLKKAKSKHGAKGATSNQLVEHA
SSNGALACRVEVAHQCFPVLAGADGGRLLVHSGGTRPRLTIWDATYGVLL
DDGESPEVTAVTVVEDAGAVAGRKAVSMTVSADGAQLALALGGKVVVCPL
PVKETGTLASLLRRKRPATMLTATTTTTIATAADVFRLSANQVFPAVDLG
RSSSAAHVLLQKTGVFADEEWEAAVVSPFRAKESAVIKALQDAAHRKDAD
AFERVLREHLQEQRQQQQQQQRAVPDGEIKAEGRDPEHTTTASGSPTPEV
VGKHGGGGVDEGKEFSTDVASSRWEQGRYNRRRALLKGCSCSAQVLSAAI
DLCISNPEANLWNALGLLLRSGGVSARNHRGLVAAIMKSGPQELLEEVVL
HVPDLPEADVVQILRHFLARAAALARKPEISQRLAQAGQSNSQRGGGGDG
YPPTGEVSKTASKGPPAGEMSKAARRRLSRYKADQKGKGAHDSSGGVRDE
SSQEAKTGDAVESDVNGGGGLGHDGVVGQSSGRGALKRRSTGQRETRVGL
REDSEAPTDDPAARAAEAASSTTAEKDDRIKKKKKLLGIATPTTMVVTIN
ETPSHERNKRTRMVVDGTSSAVPDNDASSPPPHKKSLQSNGTLANGHGRA
HDDCGGTSSESGGVSEEASKSASAEQGRGVVEAMAAEGGREGKTPPNCNQ
LKTKNKKSVVVHEPAVARAERGVLVALTLPHNEAFLRAALSGLSHGEVIV
VLQILTRLLSEGRTREAMGGGVNGKRYAVIEHDHFAGKGAPRARTEAVLS
WASAVLDSHFARLAISGSENVKHTLKTLQLTASAEGECCDLLCQVRSLVD
ELGRRHAAAAEEHRRPKRTLYSVRQLCF*
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